RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 SPATA3Q8NHX4 192 aa8.13□□□□□ -1.11
SCG3-202ENST00000542355 IFITM10A6NMD0 228 aa8.12□□□□□ -1.11
SCG3-202ENST00000542355 H3BS24 57 aa8.12□□□□□ -1.11
SCG3-202ENST00000542355 SPRY2O43597 315 aa8.12□□□□□ -1.11
SCG3-202ENST00000542355 CD7P09564 240 aa8.12□□□□□ -1.11
SCG3-202ENST00000542355 ASIPP42127 132 aa8.12□□□□□ -1.11
SCG3-202ENST00000542355 KRTAP24-1Q3LI83 254 aa8.12□□□□□ -1.11
SCG3-202ENST00000542355 ZNF493Q6ZR52 646 aa8.12□□□□□ -1.11
SCG3-202ENST00000542355 BAGE3Q86Y29 109 aa8.12□□□□□ -1.11
SCG3-202ENST00000542355 TMEM256Q8N2U0 113 aa8.12□□□□□ -1.11
SCG3-202ENST00000542355 OR10AG1Q8NH19 301 aa8.12□□□□□ -1.11
SCG3-202ENST00000542355 ALKBH7Q9BT30 221 aaPredicted RBP8.12□□□□□ -1.11
SCG3-202ENST00000542355 CNFNQ9BYD5 112 aa8.12□□□□□ -1.11
SCG3-202ENST00000542355 TP53TG3Q9ULZ0 132 aa8.12□□□□□ -1.11
SCG3-202ENST00000542355 JMJD1CQ15652 2540 aa8.12□□□□□ -1.11
SCG3-202ENST00000542355 LOC102724200A0A096LPH7 203 aaPredicted RBP8.12□□□□□ -1.11
SCG3-202ENST00000542355 A8MTW9 85 aa8.12□□□□□ -1.11
SCG3-202ENST00000542355 OR5AL1P0C617 328 aa8.12□□□□□ -1.11
SCG3-202ENST00000542355 SPANXN1Q5VSR9 72 aa8.12□□□□□ -1.11
SCG3-202ENST00000542355 STHQ8IWL8 128 aa8.12□□□□□ -1.11
SCG3-202ENST00000542355 AMN1Q8IY45 258 aa8.12□□□□□ -1.11
SCG3-202ENST00000542355 GATD1Q8NB37 220 aa8.12□□□□□ -1.11
SCG3-202ENST00000542355 OR2K2Q8NGT1 345 aa8.12□□□□□ -1.11
SCG3-202ENST00000542355 CRXO43186 299 aaPredicted RBP8.11□□□□□ -1.11
SCG3-202ENST00000542355 SNAI2O43623 268 aa8.11□□□□□ -1.11
SCG3-202ENST00000542355 NUPR1O60356 82 aa8.11□□□□□ -1.11
SCG3-202ENST00000542355 S100A2P29034 98 aa8.11□□□□□ -1.11
SCG3-202ENST00000542355 Q0VG73 95 aa8.11□□□□□ -1.11
SCG3-202ENST00000542355 KCNS1Q96KK3 526 aa8.11□□□□□ -1.11
SCG3-202ENST00000542355 RNASE3P12724 160 aaKnown RBP8.11□□□□□ -1.11
SCG3-202ENST00000542355 BEAN1Q3B7T3 259 aa8.11□□□□□ -1.11
SCG3-202ENST00000542355 AGRNO00468 2067 aa8.1□□□□□ -1.11
SCG3-202ENST00000542355 M0R381 172 aa8.1□□□□□ -1.11
SCG3-202ENST00000542355 FABP4P15090 132 aa8.1□□□□□ -1.11
SCG3-202ENST00000542355 HTN1P15515 57 aa8.1□□□□□ -1.11
SCG3-202ENST00000542355 CMC4P56277 68 aaPredicted RBP8.1□□□□□ -1.11
SCG3-202ENST00000542355 IQCJQ1A5X6 159 aa8.1□□□□□ -1.11
SCG3-202ENST00000542355 TDRG1Q3Y452 100 aa8.1□□□□□ -1.11
SCG3-202ENST00000542355 OR10J3Q5JRS4 329 aa8.1□□□□□ -1.11
SCG3-202ENST00000542355 FAM104BQ5XKR9 115 aa8.1□□□□□ -1.11
SCG3-202ENST00000542355 C18orf32Q8TCD1 76 aa8.1□□□□□ -1.11
SCG3-202ENST00000542355 PHLDA3Q9Y5J5 127 aa8.1□□□□□ -1.11
SCG3-202ENST00000542355 IGHV1OR15-1A0A075B7D0 117 aa8.1□□□□□ -1.11
SCG3-202ENST00000542355 SERF1AO75920 110 aa8.1□□□□□ -1.11
SCG3-202ENST00000542355 RBMY1A1P0DJD3 496 aaKnown RBP8.1□□□□□ -1.11
SCG3-202ENST00000542355 RBMY1CP0DJD4 496 aa8.1□□□□□ -1.11
SCG3-202ENST00000542355 RBMY1FQ15415 496 aaKnown RBP8.1□□□□□ -1.11
SCG3-202ENST00000542355 TMEM191AQ9H0A3 160 aa8.1□□□□□ -1.11
SCG3-202ENST00000542355 WFDC10AQ9H1F0 79 aa8.1□□□□□ -1.11
SCG3-202ENST00000542355 IGHV4-4A0A075B6R2 117 aa8.09□□□□□ -1.11
SCG3-202ENST00000542355 GYPEP15421 78 aa8.09□□□□□ -1.11
SCG3-202ENST00000542355 EVI2AP22794 236 aa8.09□□□□□ -1.11
SCG3-202ENST00000542355 LINC00310P59036 64 aa8.09□□□□□ -1.11
SCG3-202ENST00000542355 CACNG7P62955 275 aa8.09□□□□□ -1.11
SCG3-202ENST00000542355 SERTAD4-AS1Q5TG53 156 aa8.09□□□□□ -1.11
SCG3-202ENST00000542355 PRIMA1Q86XR5 153 aa8.09□□□□□ -1.11
SCG3-202ENST00000542355 RCHY1Q96PM5 261 aa8.09□□□□□ -1.11
SCG3-202ENST00000542355 HIST1H2BLQ99880 126 aa8.09□□□□□ -1.11
SCG3-202ENST00000542355 C19orf73Q9NVV2 129 aa8.09□□□□□ -1.11
SCG3-202ENST00000542355 MDFICQ9P1T7 246 aa8.09□□□□□ -1.11
SCG3-202ENST00000542355 MRPL51Q4U2R6 128 aaKnown RBP8.08□□□□□ -1.12
SCG3-202ENST00000542355 DNLZQ5SXM8 178 aa8.08□□□□□ -1.12
SCG3-202ENST00000542355 C9orf66Q5T8R8 295 aa8.08□□□□□ -1.12
SCG3-202ENST00000542355 KRTAP3-3Q9BYR6 98 aa8.08□□□□□ -1.12
SCG3-202ENST00000542355 KRTAP3-2Q9BYR7 98 aa8.08□□□□□ -1.12
SCG3-202ENST00000542355 SCRT2Q9NQ03 307 aa8.08□□□□□ -1.12
SCG3-202ENST00000542355 XCL2Q9UBD3 114 aa8.08□□□□□ -1.12
SCG3-202ENST00000542355 MED14OSP0DP75 135 aa8.08□□□□□ -1.12
SCG3-202ENST00000542355 RAB4AP20338 218 aa8.08□□□□□ -1.12
SCG3-202ENST00000542355 INSL3P51460 131 aa8.08□□□□□ -1.12
SCG3-202ENST00000542355 SMIM15Q7Z3B0 74 aa8.08□□□□□ -1.12
SCG3-202ENST00000542355 TRPT1Q86TN4 253 aaKnown RBP8.08□□□□□ -1.12
SCG3-202ENST00000542355 FAM110AQ9BQ89 295 aa8.08□□□□□ -1.12
SCG3-202ENST00000542355 IGHV3-16A0A0C4DH30 117 aa8.07□□□□□ -1.12
SCG3-202ENST00000542355 CBY3A6NI87 242 aa8.07□□□□□ -1.12
SCG3-202ENST00000542355 D6R8Y8 96 aa8.07□□□□□ -1.12
SCG3-202ENST00000542355 USP17L23D6RBM5 183 aa8.07□□□□□ -1.12
SCG3-202ENST00000542355 AMBPP02760 352 aa8.07□□□□□ -1.12
SCG3-202ENST00000542355 PRM2P04554 102 aa8.07□□□□□ -1.12
SCG3-202ENST00000542355 OR10D4PQ8NGN7 298 aa8.07□□□□□ -1.12
SCG3-202ENST00000542355 RNF185Q96GF1 192 aa8.07□□□□□ -1.12
SCG3-202ENST00000542355 CKS2P33552 79 aa8.07□□□□□ -1.12
SCG3-202ENST00000542355 NUTF2P61970 127 aaKnown RBP8.07□□□□□ -1.12
SCG3-202ENST00000542355 TMEM18Q96B42 140 aa8.07□□□□□ -1.12
SCG3-202ENST00000542355 TENM1Q9UKZ4 2725 aa8.06□□□□□ -1.12
SCG3-202ENST00000542355 SMKR1H3BMG3 65 aa8.06□□□□□ -1.12
SCG3-202ENST00000542355 ORMDL3Q8N138 153 aa8.06□□□□□ -1.12
SCG3-202ENST00000542355 C3orf56Q8N813 242 aa8.06□□□□□ -1.12
SCG3-202ENST00000542355 PACRGQ96M98 296 aaPredicted RBP8.06□□□□□ -1.12
SCG3-202ENST00000542355 LINC01587Q99440 93 aa8.06□□□□□ -1.12
SCG3-202ENST00000542355 TEP1Q99973 2627 aaKnown RBP8.06□□□□□ -1.12
SCG3-202ENST00000542355 NCR2O95944 276 aa8.05□□□□□ -1.12
SCG3-202ENST00000542355 INSP01308 110 aa8.05□□□□□ -1.12
SCG3-202ENST00000542355 ESDP10768 282 aa8.05□□□□□ -1.12
SCG3-202ENST00000542355 RPL35AP18077 110 aaKnown RBP8.05□□□□□ -1.12
SCG3-202ENST00000542355 NIT1Q86X76 327 aa8.05□□□□□ -1.12
SCG3-202ENST00000542355 DEFB125Q8N687 156 aa8.05□□□□□ -1.12
SCG3-202ENST00000542355 C14orf178Q8N769 122 aaPredicted RBP8.05□□□□□ -1.12
SCG3-202ENST00000542355 PRELID3AQ96N28 172 aa8.05□□□□□ -1.12
SCG3-202ENST00000542355 ZNF747Q9BV97 191 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms