RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 S100A8P05109 93 aa20.29■□□□□ 0.84
CCM2-218ENST00000541586 RPL35AP18077 110 aaKnown RBP20.29■□□□□ 0.84
CCM2-218ENST00000541586 DNLZQ5SXM8 178 aa20.29■□□□□ 0.84
CCM2-218ENST00000541586 IGHV1OR15-1A0A075B7D0 117 aa20.28■□□□□ 0.84
CCM2-218ENST00000541586 TWIST1Q15672 202 aa20.28■□□□□ 0.84
CCM2-218ENST00000541586 OR10AG1Q8NH19 301 aa20.28■□□□□ 0.84
CCM2-218ENST00000541586 TIMM8BQ9Y5J9 83 aaPredicted RBP20.28■□□□□ 0.84
CCM2-218ENST00000541586 KIAA1644Q3SXP7 199 aa20.27■□□□□ 0.84
CCM2-218ENST00000541586 GATD1Q8NB37 220 aa20.27■□□□□ 0.84
CCM2-218ENST00000541586 TP53TG3Q9ULZ0 132 aa20.27■□□□□ 0.84
CCM2-218ENST00000541586 RNASE3P12724 160 aaKnown RBP20.27■□□□□ 0.83
CCM2-218ENST00000541586 MSRB1Q9NZV6 116 aa20.27■□□□□ 0.83
CCM2-218ENST00000541586 AMBPP02760 352 aa20.26■□□□□ 0.83
CCM2-218ENST00000541586 S100A6P06703 90 aa20.26■□□□□ 0.83
CCM2-218ENST00000541586 NUTF2P61970 127 aaKnown RBP20.26■□□□□ 0.83
CCM2-218ENST00000541586 XCL2Q9UBD3 114 aa20.26■□□□□ 0.83
CCM2-218ENST00000541586 INSP01308 110 aa20.25■□□□□ 0.83
CCM2-218ENST00000541586 MED14OSP0DP75 135 aa20.25■□□□□ 0.83
CCM2-218ENST00000541586 ZNF493Q6ZR52 646 aa20.25■□□□□ 0.83
CCM2-218ENST00000541586 SCRT2Q9NQ03 307 aa20.24■□□□□ 0.83
CCM2-218ENST00000541586 MEGF8Q7Z7M0 2845 aa20.24■□□□□ 0.83
CCM2-218ENST00000541586 LOC102724200A0A096LPH7 203 aaPredicted RBP20.24■□□□□ 0.83
CCM2-218ENST00000541586 NDUFA6P56556 154 aa20.24■□□□□ 0.83
CCM2-218ENST00000541586 IGHV4-4A0A075B6R2 117 aa20.23■□□□□ 0.83
CCM2-218ENST00000541586 CACNG7P62955 275 aa20.23■□□□□ 0.83
CCM2-218ENST00000541586 SPANXN1Q5VSR9 72 aa20.23■□□□□ 0.83
CCM2-218ENST00000541586 C20orf144Q9BQM9 153 aa20.23■□□□□ 0.83
CCM2-218ENST00000541586 IGHV3-16A0A0C4DH30 117 aa20.22■□□□□ 0.83
CCM2-218ENST00000541586 SPRY2O43597 315 aa20.22■□□□□ 0.83
CCM2-218ENST00000541586 A8MZ25 164 aa20.22■□□□□ 0.83
CCM2-218ENST00000541586 SNRPEP62304 92 aaKnown RBP20.22■□□□□ 0.83
CCM2-218ENST00000541586 PHLDA3Q9Y5J5 127 aa20.22■□□□□ 0.83
CCM2-218ENST00000541586 MDFICQ9P1T7 246 aa20.21■□□□□ 0.83
CCM2-218ENST00000541586 C5orf52A6NGY3 159 aa20.2■□□□□ 0.82
CCM2-218ENST00000541586 GIG44P09565 113 aaPredicted RBP20.2■□□□□ 0.82
CCM2-218ENST00000541586 CBY3A6NI87 242 aa20.19■□□□□ 0.82
CCM2-218ENST00000541586 HTN1P15515 57 aa20.19■□□□□ 0.82
CCM2-218ENST00000541586 TRGV11A0A075B6L2 103 aa20.19■□□□□ 0.82
CCM2-218ENST00000541586 LOC105371267A0A1B0GV96 52 aa20.19■□□□□ 0.82
CCM2-218ENST00000541586 M0R381 172 aa20.19■□□□□ 0.82
CCM2-218ENST00000541586 SRIP30626 198 aa20.19■□□□□ 0.82
CCM2-218ENST00000541586 LINC01587Q99440 93 aa20.19■□□□□ 0.82
CCM2-218ENST00000541586 TMEM191AQ9H0A3 160 aa20.19■□□□□ 0.82
CCM2-218ENST00000541586 C1orf158Q8N1D5 194 aa20.18■□□□□ 0.82
CCM2-218ENST00000541586 C9orf85Q96MD7 179 aa20.18■□□□□ 0.82
CCM2-218ENST00000541586 FAM104BQ5XKR9 115 aa20.17■□□□□ 0.82
CCM2-218ENST00000541586 AMN1Q8IY45 258 aa20.17■□□□□ 0.82
CCM2-218ENST00000541586 LINC00467Q9BRT7 94 aa20.17■□□□□ 0.82
CCM2-218ENST00000541586 PRM2P04554 102 aa20.16■□□□□ 0.82
CCM2-218ENST00000541586 MORN3Q6PF18 240 aaPredicted RBP20.16■□□□□ 0.82
CCM2-218ENST00000541586 CSTL1Q9H114 145 aa20.16■□□□□ 0.82
CCM2-218ENST00000541586 ALKBH7Q9BT30 221 aaPredicted RBP20.16■□□□□ 0.82
CCM2-218ENST00000541586 FBN3Q75N90 2809 aa20.15■□□□□ 0.82
CCM2-218ENST00000541586 APOC4P55056 127 aa20.15■□□□□ 0.82
CCM2-218ENST00000541586 DMRTA1Q5VZB9 504 aa20.15■□□□□ 0.82
CCM2-218ENST00000541586 SBSPONQ8IVN8 264 aa20.15■□□□□ 0.82
CCM2-218ENST00000541586 TMEM256Q8N2U0 113 aa20.15■□□□□ 0.82
CCM2-218ENST00000541586 TMEM208Q9BTX3 173 aa20.15■□□□□ 0.82
CCM2-218ENST00000541586 NXPH4O95158 308 aa20.14■□□□□ 0.81
CCM2-218ENST00000541586 EVI2AP22794 236 aa20.14■□□□□ 0.81
CCM2-218ENST00000541586 MUC4Q99102 2169 aa20.13■□□□□ 0.81
CCM2-218ENST00000541586 COA6Q5JTJ3 125 aaKnown RBP20.13■□□□□ 0.81
CCM2-218ENST00000541586 C1QTNF4Q9BXJ3 329 aa20.13■□□□□ 0.81
CCM2-218ENST00000541586 PRKDCP78527 4128 aaKnown RBP20.13■□□□□ 0.81
CCM2-218ENST00000541586 IGHV3OR16-12A0A075B7B8 117 aa20.12■□□□□ 0.81
CCM2-218ENST00000541586 SMIM15Q7Z3B0 74 aa20.12■□□□□ 0.81
CCM2-218ENST00000541586 RNF185Q96GF1 192 aa20.12■□□□□ 0.81
CCM2-218ENST00000541586 HOXA5P20719 270 aa20.11■□□□□ 0.81
CCM2-218ENST00000541586 Q0VG73 95 aa20.11■□□□□ 0.81
CCM2-218ENST00000541586 MRPL51Q4U2R6 128 aaKnown RBP20.11■□□□□ 0.81
CCM2-218ENST00000541586 KIR2DL5BA0A0G2JN68 375 aa20.1■□□□□ 0.81
CCM2-218ENST00000541586 KIR2DL5BA0A0G2JPC4 375 aa20.1■□□□□ 0.81
CCM2-218ENST00000541586 UBE2CO00762 179 aa20.1■□□□□ 0.81
CCM2-218ENST00000541586 KIR2DL5AQ8N109 375 aa20.1■□□□□ 0.81
CCM2-218ENST00000541586 CSNK1G2-AS1Q8NCQ2 148 aa20.1■□□□□ 0.81
CCM2-218ENST00000541586 KIR2DL5BQ8NHK3 375 aa20.1■□□□□ 0.81
CCM2-218ENST00000541586 RAB4AP20338 218 aa20.1■□□□□ 0.81
CCM2-218ENST00000541586 OR10J3Q5JRS4 329 aa20.1■□□□□ 0.81
CCM2-218ENST00000541586 C18orf32Q8TCD1 76 aa20.09■□□□□ 0.81
CCM2-218ENST00000541586 B9D2Q9BPU9 175 aa20.08■□□□□ 0.81
CCM2-218ENST00000541586 GOLT1BQ9Y3E0 138 aa20.08■□□□□ 0.81
CCM2-218ENST00000541586 D6R8Y8 96 aa20.07■□□□□ 0.8
CCM2-218ENST00000541586 ZNF415Q09FC8 603 aa20.07■□□□□ 0.8
CCM2-218ENST00000541586 BAGE3Q86Y29 109 aa20.07■□□□□ 0.8
CCM2-218ENST00000541586 C11orf72Q8NBR9 251 aa20.07■□□□□ 0.8
CCM2-218ENST00000541586 AP1S3Q96PC3 154 aa20.07■□□□□ 0.8
CCM2-218ENST00000541586 GSN-AS1Q9NRJ2 163 aa20.07■□□□□ 0.8
CCM2-218ENST00000541586 U3KQK5 164 aa20.07■□□□□ 0.8
CCM2-218ENST00000541586 AZU1P20160 251 aa20.07■□□□□ 0.8
CCM2-218ENST00000541586 IQCJQ1A5X6 159 aa20.07■□□□□ 0.8
CCM2-218ENST00000541586 DEFB135Q30KP9 77 aa20.07■□□□□ 0.8
CCM2-218ENST00000541586 SYT8Q8NBV8 401 aa20.07■□□□□ 0.8
CCM2-218ENST00000541586 C14orf178Q8N769 122 aaPredicted RBP20.06■□□□□ 0.8
CCM2-218ENST00000541586 PDZD11Q5EBL8 140 aa20.05■□□□□ 0.8
CCM2-218ENST00000541586 ORMDL3Q8N138 153 aa20.05■□□□□ 0.8
CCM2-218ENST00000541586 HIST3H2BBQ8N257 126 aa20.05■□□□□ 0.8
CCM2-218ENST00000541586 NBEAL2Q6ZNJ1 2754 aa20.05■□□□□ 0.8
CCM2-218ENST00000541586 CKS2P33552 79 aa20.05■□□□□ 0.8
CCM2-218ENST00000541586 LINC00310P59036 64 aa20.05■□□□□ 0.8
CCM2-218ENST00000541586 RCHY1Q96PM5 261 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms