RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.62□□□□□ -1.036e-7■■■■□ 23
LGR5-203ENST00000540815 APOMO95445 188 aa8.62□□□□□ -1.03
LGR5-203ENST00000540815 SCGB1A1P11684 91 aa8.62□□□□□ -1.03
LGR5-203ENST00000540815 BLCAPP62952 87 aa8.62□□□□□ -1.03
LGR5-203ENST00000540815 TMEM78Q5T7P6 136 aa8.62□□□□□ -1.03
LGR5-203ENST00000540815 ZC2HC1BQ5TFG8 222 aa8.62□□□□□ -1.03
LGR5-203ENST00000540815 UNQ9165/PRO28630Q6UXU0 137 aa8.62□□□□□ -1.03
LGR5-203ENST00000540815 C9orf139Q6ZV77 190 aa8.62□□□□□ -1.03
LGR5-203ENST00000540815 DEFB104AQ8WTQ1 72 aa8.62□□□□□ -1.03
LGR5-203ENST00000540815 HHLA3Q9XRX5 114 aa8.62□□□□□ -1.03
LGR5-203ENST00000540815 IGLV1-40P01703 118 aa8.62□□□□□ -1.03
LGR5-203ENST00000540815 SRSF1Q07955 248 aaKnown RBP eCLIP8.62□□□□□ -1.03
LGR5-203ENST00000540815 TWIST1Q15672 202 aa8.62□□□□□ -1.03
LGR5-203ENST00000540815 LGALS9BQ3B8N2 356 aa8.62□□□□□ -1.03
LGR5-203ENST00000540815 MRPL51Q4U2R6 128 aaKnown RBP8.62□□□□□ -1.03
LGR5-203ENST00000540815 LGALS9CQ6DKI2 356 aa8.62□□□□□ -1.03
LGR5-203ENST00000540815 ORMDL3Q8N138 153 aa8.62□□□□□ -1.03
LGR5-203ENST00000540815 C16orf92Q96LL3 132 aa8.62□□□□□ -1.03
LGR5-203ENST00000540815 CFHR3Q02985 330 aa8.61□□□□□ -1.03
LGR5-203ENST00000540815 LINC01356Q8N9X3 169 aa8.61□□□□□ -1.03
LGR5-203ENST00000540815 KLK15Q9H2R5 256 aa8.61□□□□□ -1.03
LGR5-203ENST00000540815 CDIP1Q9H305 208 aa8.61□□□□□ -1.03
LGR5-203ENST00000540815 ZNF580Q9UK33 172 aa8.61□□□□□ -1.03
LGR5-203ENST00000540815 CSPG4Q6UVK1 2322 aa8.61□□□□□ -1.03
LGR5-203ENST00000540815 A0A096LNT2 108 aa8.61□□□□□ -1.03
LGR5-203ENST00000540815 PF4V1P10720 104 aa8.61□□□□□ -1.03
LGR5-203ENST00000540815 CEND1Q8N111 149 aa8.61□□□□□ -1.03
LGR5-203ENST00000540815 KIR2DL4Q99706 377 aa8.61□□□□□ -1.03
LGR5-203ENST00000540815 FOXC2Q99958 501 aa8.61□□□□□ -1.03
LGR5-203ENST00000540815 E9PLD3 99 aa8.6□□□□□ -1.03
LGR5-203ENST00000540815 F8W1H4 67 aa8.6□□□□□ -1.03
LGR5-203ENST00000540815 HBDP02042 147 aa8.6□□□□□ -1.03
LGR5-203ENST00000540815 CKS2P33552 79 aa8.6□□□□□ -1.03
LGR5-203ENST00000540815 C12orf74Q32Q52 190 aa8.6□□□□□ -1.03
LGR5-203ENST00000540815 ZFP2Q6ZN57 461 aa8.6□□□□□ -1.03
LGR5-203ENST00000540815 POLQO75417 2590 aa8.6□□□□□ -1.03
LGR5-203ENST00000540815 J3QR89 54 aa8.6□□□□□ -1.03
LGR5-203ENST00000540815 IGHV3-11P01762 117 aa8.6□□□□□ -1.03
LGR5-203ENST00000540815 LEPP41159 167 aa8.6□□□□□ -1.03
LGR5-203ENST00000540815 FAM208BQ5VWN6 2430 aa8.6□□□□□ -1.03
LGR5-203ENST00000540815 ZANQ9Y493 2812 aa8.59□□□□□ -1.03
LGR5-203ENST00000540815 IGKV3D-20A0A0C4DH25 116 aa8.59□□□□□ -1.03
LGR5-203ENST00000540815 UBR5O95071 2799 aaPredicted RBP8.59□□□□□ -1.03
LGR5-203ENST00000540815 COX6B1P14854 86 aa8.59□□□□□ -1.03
LGR5-203ENST00000540815 SMCPP49901 116 aaPredicted RBP8.59□□□□□ -1.03
LGR5-203ENST00000540815 GPHB5Q86YW7 130 aa8.59□□□□□ -1.03
LGR5-203ENST00000540815 C20orf173Q96LM9 149 aa8.59□□□□□ -1.03
LGR5-203ENST00000540815 HIST1H4GQ99525 98 aa8.59□□□□□ -1.03
LGR5-203ENST00000540815 MRPL16Q9NX20 251 aaKnown RBP8.59□□□□□ -1.03
LGR5-203ENST00000540815 LENEPQ9Y5L5 61 aa8.59□□□□□ -1.03
LGR5-203ENST00000540815 LRRK2Q5S007 2527 aa8.59□□□□□ -1.03
LGR5-203ENST00000540815 TRBV20-1A0A075B6N2 111 aa8.59□□□□□ -1.03
LGR5-203ENST00000540815 PRSS29PA6NIE9 313 aa8.59□□□□□ -1.03
LGR5-203ENST00000540815 J3QLI3 93 aa8.59□□□□□ -1.03
LGR5-203ENST00000540815 SOCS3O14543 225 aa8.59□□□□□ -1.03
LGR5-203ENST00000540815 C11orf21Q9P2W6 132 aa8.59□□□□□ -1.03
LGR5-203ENST00000540815 PRO0461Q9UI25 63 aa8.59□□□□□ -1.03
LGR5-203ENST00000540815 CYSLTR1Q9Y271 337 aa8.59□□□□□ -1.03
LGR5-203ENST00000540815 UFC1Q9Y3C8 167 aa8.59□□□□□ -1.03
LGR5-203ENST00000540815 USP9YO00507 2555 aaPredicted RBP8.59□□□□□ -1.03
LGR5-203ENST00000540815 RNF185Q96GF1 192 aa8.58□□□□□ -1.04
LGR5-203ENST00000540815 LOC107984156A0A0G2JMH3 177 aa8.58□□□□□ -1.04
LGR5-203ENST00000540815 ARL17AQ8IVW1 177 aa8.58□□□□□ -1.04
LGR5-203ENST00000540815 C3orf56Q8N813 242 aa8.58□□□□□ -1.04
LGR5-203ENST00000540815 ANKRD17O75179 2603 aaKnown RBP8.58□□□□□ -1.04
LGR5-203ENST00000540815 SIVA1O15304 175 aa8.58□□□□□ -1.04
LGR5-203ENST00000540815 FOXI1Q12951 378 aa8.58□□□□□ -1.04
LGR5-203ENST00000540815 ODF1Q14990 250 aa8.58□□□□□ -1.04
LGR5-203ENST00000540815 DEFB112Q30KQ8 113 aa8.58□□□□□ -1.04
LGR5-203ENST00000540815 IGHV7-4-1A0A0J9YVY3 117 aa8.57□□□□□ -1.04
LGR5-203ENST00000540815 OVOL1O14753 267 aa8.57□□□□□ -1.04
LGR5-203ENST00000540815 PSMB2P49721 201 aa8.57□□□□□ -1.04
LGR5-203ENST00000540815 LINC00477Q96M19 166 aa8.57□□□□□ -1.04
LGR5-203ENST00000540815 CENPEQ02224 2701 aa8.57□□□□□ -1.04
LGR5-203ENST00000540815 H3BVH4 76 aa8.57□□□□□ -1.04
LGR5-203ENST00000540815 IGHV4-59P01825 116 aa8.57□□□□□ -1.04
LGR5-203ENST00000540815 TCTEX1D4Q5JR98 221 aa8.57□□□□□ -1.04
LGR5-203ENST00000540815 ZNF843Q8N446 348 aa8.57□□□□□ -1.04
LGR5-203ENST00000540815 MAPK1IP1LQ8NDC0 245 aa8.57□□□□□ -1.04
LGR5-203ENST00000540815 MRPL35Q9NZE8 188 aaKnown RBP8.57□□□□□ -1.04
LGR5-203ENST00000540815 HERV-K104P63124 156 aa8.56□□□□□ -1.04
LGR5-203ENST00000540815 TM2D2Q9BX73 214 aa8.56□□□□□ -1.04
LGR5-203ENST00000540815 TRAV26-2A0A0B4J265 109 aa8.56□□□□□ -1.04
LGR5-203ENST00000540815 SPRY2O43597 315 aa8.56□□□□□ -1.04
LGR5-203ENST00000540815 IGKCP01834 107 aa8.56□□□□□ -1.04
LGR5-203ENST00000540815 TMEM95Q3KNT9 176 aa8.56□□□□□ -1.04
LGR5-203ENST00000540815 Q6ZUT4 128 aa8.56□□□□□ -1.04
LGR5-203ENST00000540815 OR10J6PQ8NGY7 276 aa8.56□□□□□ -1.04
LGR5-203ENST00000540815 ANAPC13Q9BS18 74 aa8.56□□□□□ -1.04
LGR5-203ENST00000540815 DAZ1Q9NQZ3 744 aaKnown RBP8.56□□□□□ -1.04
LGR5-203ENST00000540815 K7EMT4 169 aa8.55□□□□□ -1.04
LGR5-203ENST00000540815 PSMB8P28062 276 aa8.55□□□□□ -1.04
LGR5-203ENST00000540815 CFAP161Q6P656 301 aa8.55□□□□□ -1.04
LGR5-203ENST00000540815 TMEM158Q8WZ71 300 aa8.55□□□□□ -1.04
LGR5-203ENST00000540815 RHPN1-AS1Q9BWJ2 59 aa8.55□□□□□ -1.04
LGR5-203ENST00000540815 PGPEP1Q9NXJ5 209 aa8.55□□□□□ -1.04
LGR5-203ENST00000540815 PTPN13Q12923 2485 aa8.55□□□□□ -1.04
LGR5-203ENST00000540815 TMEM89A2RUT3 159 aa8.55□□□□□ -1.04
LGR5-203ENST00000540815 LINC01546A6NGU7 62 aa8.55□□□□□ -1.04
LGR5-203ENST00000540815 KRTAP10-9P60411 292 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 1324.5 ms