RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 IGHV3-16A0A0C4DH30 117 aa8.63□□□□□ -1.03
VTN-202ENST00000539746 A0A1B0GXF2 115 aa8.63□□□□□ -1.03
VTN-202ENST00000539746 GRIFINA4D1Z8 144 aa8.63□□□□□ -1.03
VTN-202ENST00000539746 TCAPO15273 167 aa8.63□□□□□ -1.03
VTN-202ENST00000539746 NXPH4O95158 308 aa8.63□□□□□ -1.03
VTN-202ENST00000539746 NTF3P20783 257 aa8.63□□□□□ -1.03
VTN-202ENST00000539746 DEFB1P60022 68 aa8.63□□□□□ -1.03
VTN-202ENST00000539746 OXLD1Q5BKU9 147 aa8.63□□□□□ -1.03
VTN-202ENST00000539746 KPRPQ5T749 579 aaPredicted RBP8.63□□□□□ -1.03
VTN-202ENST00000539746 PRR9Q5T870 116 aa8.63□□□□□ -1.03
VTN-202ENST00000539746 ZNF705AQ6ZN79 300 aaPredicted RBP8.63□□□□□ -1.03
VTN-202ENST00000539746 MRAP2Q96G30 205 aa8.63□□□□□ -1.03
VTN-202ENST00000539746 DPH3P1Q9H4G8 78 aa8.63□□□□□ -1.03
VTN-202ENST00000539746 TIMM8BQ9Y5J9 83 aaPredicted RBP8.63□□□□□ -1.03
VTN-202ENST00000539746 WNK1Q9H4A3 2382 aa8.62□□□□□ -1.03
VTN-202ENST00000539746 PHOX2AO14813 284 aa8.62□□□□□ -1.03
VTN-202ENST00000539746 HTN1P15515 57 aa8.62□□□□□ -1.03
VTN-202ENST00000539746 G0S2P27469 103 aa8.62□□□□□ -1.03
VTN-202ENST00000539746 DAZ2Q13117 558 aaKnown RBP8.62□□□□□ -1.03
VTN-202ENST00000539746 ZNF876PQ49A33 203 aa8.62□□□□□ -1.03
VTN-202ENST00000539746 LINC00518Q8N0U6 118 aa8.62□□□□□ -1.03
VTN-202ENST00000539746 C9orf85Q96MD7 179 aa8.62□□□□□ -1.03
VTN-202ENST00000539746 MRPL18Q9H0U6 180 aaKnown RBP8.62□□□□□ -1.03
VTN-202ENST00000539746 IGHV3OR16-12A0A075B7B8 117 aa8.61□□□□□ -1.03
VTN-202ENST00000539746 RBMY1BA6NDE4 496 aaKnown RBP8.61□□□□□ -1.03
VTN-202ENST00000539746 RBMY1EA6NEQ0 496 aaKnown RBP8.61□□□□□ -1.03
VTN-202ENST00000539746 M0R381 172 aa8.61□□□□□ -1.03
VTN-202ENST00000539746 RBMY1DP0C7P1 496 aaKnown RBP8.61□□□□□ -1.03
VTN-202ENST00000539746 SMIM6P0DI80 62 aa8.61□□□□□ -1.03
VTN-202ENST00000539746 FXYD7P58549 80 aa8.61□□□□□ -1.03
VTN-202ENST00000539746 SNRPEP62304 92 aaKnown RBP8.61□□□□□ -1.03
VTN-202ENST00000539746 ORMDL3Q8N138 153 aa8.61□□□□□ -1.03
VTN-202ENST00000539746 MDFIQ99750 246 aa8.61□□□□□ -1.03
VTN-202ENST00000539746 LINC01549A6NIU2 74 aa8.6□□□□□ -1.03
VTN-202ENST00000539746 LYRM9A8MSI8 78 aa8.6□□□□□ -1.03
VTN-202ENST00000539746 GZMBP10144 247 aa8.6□□□□□ -1.03
VTN-202ENST00000539746 HOXA5P20719 270 aa8.6□□□□□ -1.03
VTN-202ENST00000539746 SLAQ13239 276 aa8.6□□□□□ -1.03
VTN-202ENST00000539746 ZNF124Q15973 351 aa8.6□□□□□ -1.03
VTN-202ENST00000539746 OR10J3Q5JRS4 329 aa8.6□□□□□ -1.03
VTN-202ENST00000539746 FAM104BQ5XKR9 115 aa8.6□□□□□ -1.03
VTN-202ENST00000539746 ZFP2Q6ZN57 461 aa8.6□□□□□ -1.03
VTN-202ENST00000539746 TMEM136Q6ZRR5 245 aa8.6□□□□□ -1.03
VTN-202ENST00000539746 C11orf21Q9P2W6 132 aa8.6□□□□□ -1.03
VTN-202ENST00000539746 K7EMI3 77 aa8.59□□□□□ -1.03
VTN-202ENST00000539746 GNRH2O43555 120 aa8.59□□□□□ -1.03
VTN-202ENST00000539746 SPRY2O43597 315 aa8.59□□□□□ -1.03
VTN-202ENST00000539746 SPINK4O60575 86 aa8.59□□□□□ -1.03
VTN-202ENST00000539746 TRGC2P03986 189 aa8.59□□□□□ -1.03
VTN-202ENST00000539746 RNASE3P12724 160 aaKnown RBP8.59□□□□□ -1.03
VTN-202ENST00000539746 CKS2P33552 79 aa8.59□□□□□ -1.03
VTN-202ENST00000539746 AKR1D1P51857 326 aa8.59□□□□□ -1.03
VTN-202ENST00000539746 CSNK1G2-AS1Q8NCQ2 148 aa8.59□□□□□ -1.03
VTN-202ENST00000539746 RNASE8Q8TDE3 154 aaKnown RBP8.59□□□□□ -1.03
VTN-202ENST00000539746 RASL10AQ92737 203 aa8.59□□□□□ -1.03
VTN-202ENST00000539746 RNF183Q96D59 192 aa8.59□□□□□ -1.03
VTN-202ENST00000539746 ZMAT4Q9H898 229 aa8.59□□□□□ -1.03
VTN-202ENST00000539746 COL6A5A8TX70 2615 aa8.58□□□□□ -1.04
VTN-202ENST00000539746 FBN1P35555 2871 aaKnown RBP8.58□□□□□ -1.04
VTN-202ENST00000539746 HIST1H2BKO60814 126 aa8.58□□□□□ -1.04
VTN-202ENST00000539746 HIST1H2BJP06899 126 aa8.58□□□□□ -1.04
VTN-202ENST00000539746 HIST1H2BOP23527 126 aa8.58□□□□□ -1.04
VTN-202ENST00000539746 HIST1H2BBP33778 126 aa8.58□□□□□ -1.04
VTN-202ENST00000539746 HIST1H2BDP58876 126 aa8.58□□□□□ -1.04
VTN-202ENST00000539746 HIST1H2BCP62807 126 aa8.58□□□□□ -1.04
VTN-202ENST00000539746 HIST2H2BEQ16778 126 aa8.58□□□□□ -1.04
VTN-202ENST00000539746 COA6Q5JTJ3 125 aaKnown RBP8.58□□□□□ -1.04
VTN-202ENST00000539746 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.58□□□□□ -1.04
VTN-202ENST00000539746 C1orf158Q8N1D5 194 aa8.58□□□□□ -1.04
VTN-202ENST00000539746 OR10AG1Q8NH19 301 aa8.58□□□□□ -1.04
VTN-202ENST00000539746 HIST1H2BHQ93079 126 aa8.58□□□□□ -1.04
VTN-202ENST00000539746 HIST1H2BNQ99877 126 aa8.58□□□□□ -1.04
VTN-202ENST00000539746 HIST1H2BMQ99879 126 aa8.58□□□□□ -1.04
VTN-202ENST00000539746 SPATA25Q9BR10 227 aa8.58□□□□□ -1.04
VTN-202ENST00000539746 OVOL2Q9BRP0 275 aa8.58□□□□□ -1.04
VTN-202ENST00000539746 GSN-AS1Q9NRJ2 163 aa8.58□□□□□ -1.04
VTN-202ENST00000539746 TRGV2A0A075B6R0 118 aa8.57□□□□□ -1.04
VTN-202ENST00000539746 G3V4G9 280 aa8.57□□□□□ -1.04
VTN-202ENST00000539746 S100A12P80511 92 aa8.57□□□□□ -1.04
VTN-202ENST00000539746 WFDC10AQ9H1F0 79 aa8.57□□□□□ -1.04
VTN-202ENST00000539746 TENM1Q9UKZ4 2725 aa8.57□□□□□ -1.04
VTN-202ENST00000539746 TRAV4A0A0B4J268 109 aa8.56□□□□□ -1.04
VTN-202ENST00000539746 F5H697 171 aa8.56□□□□□ -1.04
VTN-202ENST00000539746 PRB4P10163 310 aaPredicted RBP8.56□□□□□ -1.04
VTN-202ENST00000539746 AZU1P20160 251 aa8.56□□□□□ -1.04
VTN-202ENST00000539746 RAB4AP20338 218 aa8.56□□□□□ -1.04
VTN-202ENST00000539746 PMCHP20382 165 aa8.56□□□□□ -1.04
VTN-202ENST00000539746 S100A2P29034 98 aa8.56□□□□□ -1.04
VTN-202ENST00000539746 SMAGPQ0VAQ4 97 aa8.56□□□□□ -1.04
VTN-202ENST00000539746 BAGE3Q86Y29 109 aa8.56□□□□□ -1.04
VTN-202ENST00000539746 OR4C5Q8NGB2 326 aa8.56□□□□□ -1.04
VTN-202ENST00000539746 OR11H2Q8NH07 326 aa8.56□□□□□ -1.04
VTN-202ENST00000539746 C18orf15Q96N68 181 aa8.56□□□□□ -1.04
VTN-202ENST00000539746 C20orf78Q9BR46 151 aa8.56□□□□□ -1.04
VTN-202ENST00000539746 MAP1LC3AQ9H492 121 aa8.56□□□□□ -1.04
VTN-202ENST00000539746 NXT2Q9NPJ8 142 aaKnown RBP8.56□□□□□ -1.04
VTN-202ENST00000539746 TRGV1A0A0A0MS02 117 aa8.55□□□□□ -1.04
VTN-202ENST00000539746 FRMD6-AS1P0C7T7 363 aa8.55□□□□□ -1.04
VTN-202ENST00000539746 SPART-AS1P0CW21 52 aa8.55□□□□□ -1.04
VTN-202ENST00000539746 NDUFA6P56556 154 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms