RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 GUSBP11Q6P575 273 aa2.37□□□□□ -2.03
CSDE1-216ENST00000534389 SIGLEC15Q6ZMC9 328 aa2.37□□□□□ -2.03
CSDE1-216ENST00000534389 SDIM1Q6ZPB5 146 aa2.37□□□□□ -2.03
CSDE1-216ENST00000534389 Q6ZTC4 211 aa2.37□□□□□ -2.03
CSDE1-216ENST00000534389 SMIM29Q86T20 159 aa2.37□□□□□ -2.03
CSDE1-216ENST00000534389 C14orf178Q8N769 122 aaPredicted RBP2.37□□□□□ -2.03
CSDE1-216ENST00000534389 UBE2WQ96B02 151 aa2.37□□□□□ -2.03
CSDE1-216ENST00000534389 JPT2Q9H910 190 aa2.37□□□□□ -2.03
CSDE1-216ENST00000534389 NXT2Q9NPJ8 142 aaKnown RBP2.37□□□□□ -2.03
CSDE1-216ENST00000534389 TMEM14CQ9P0S9 112 aa2.37□□□□□ -2.03
CSDE1-216ENST00000534389 GNG12Q9UBI6 72 aa2.37□□□□□ -2.03
CSDE1-216ENST00000534389 PRO1854Q9UHT4 67 aa2.37□□□□□ -2.03
CSDE1-216ENST00000534389 PYGO1Q9Y3Y4 419 aa2.37□□□□□ -2.03
CSDE1-216ENST00000534389 TNCP24821 2201 aa2.37□□□□□ -2.03
CSDE1-216ENST00000534389 PCNTO95613 3336 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 SVILO95425 2214 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 CENPFP49454 3210 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 IGLV4-69A0A075B6H9 119 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 TRBV19A0A075B6N1 114 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 IGHV4-4A0A075B6R2 117 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 IGKV1D-17A0A075B6S4 117 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 TRBV7-1A0A0A6YYK4 115 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 IGHV3-21A0A0B4J1V1 117 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 TRAV12-1A0A0B4J245 112 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 TRAV41A0A0B4J266 112 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 SPTY2D1-AS1A0A0U1RR47 76 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 FAM240AA0A1B0GVK7 77 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 TINCRA0A1B0GVN0 87 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 C11orf86A6NJI1 115 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 NCBP2LA6PVI3 153 aaKnown RBP2.36□□□□□ -2.03
CSDE1-216ENST00000534389 EPM2AB3EWF7 344 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 H7C2G1 150 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 M0R3E3 92 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 ORM1P02763 201 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 TRGV3P03979 118 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 IGKV1-16P04430 117 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 SAA1P0DJI8 122 aaPredicted RBP2.36□□□□□ -2.03
CSDE1-216ENST00000534389 SAA2P0DJI9 122 aaPredicted RBP2.36□□□□□ -2.03
CSDE1-216ENST00000534389 IGHV4-31P0DP07 118 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 PLNP26678 52 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 CNTFRP26992 372 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 PRDX2P32119 198 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 TNFRSF4P43489 277 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 EDDM3AQ14507 147 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 LYRM7Q5U5X0 104 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 LINC00336Q6ZUF6 198 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 IL17RELQ6ZVW7 336 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 COX8CQ7Z4L0 72 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 Q8IYB0 196 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 TMEM86BQ8N661 226 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 SLC25A29Q8N8R3 303 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 TMEM75Q8N9X5 138 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 MRAPQ8TCY5 172 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 EEF1AKMT3Q96AZ1 226 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 DSCR8Q96T75 97 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 CNFNQ9BYD5 112 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 C22orf24Q9Y442 160 aa2.36□□□□□ -2.03
CSDE1-216ENST00000534389 CNTRLQ7Z7A1 2325 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 IGKV3D-15A0A087WSY6 115 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 A0A087WW49 117 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 IGKV2-40A0A087WW87 121 aaPredicted RBP2.35□□□□□ -2.03
CSDE1-216ENST00000534389 IGHV1OR21-1A0A087WYE8 117 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 IGHV1-45A0A0A0MS14 117 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 TRAV26-2A0A0B4J265 109 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 TRAV17A0A0B4J275 112 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 TMEM223A0PJW6 202 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 PINLYPA6NC86 204 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 IQCF6A8MYZ5 107 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 CDK2AP2O75956 126 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 IGKV2D-40P01614 121 aaPredicted RBP2.35□□□□□ -2.03
CSDE1-216ENST00000534389 IGLV1-44P01699 117 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 IGLV2-23P01705 113 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 RPL35AP18077 110 aaKnown RBP2.35□□□□□ -2.03
CSDE1-216ENST00000534389 HERVK_113P61574 105 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 LAGE3Q14657 143 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 TMEM170BQ5T4T1 132 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 KRTAP5-4Q6L8H1 288 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 DUX4L9Q6RFH8 374 aaPredicted RBP2.35□□□□□ -2.03
CSDE1-216ENST00000534389 C2orf82Q6UX34 121 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 ZNF491Q8N8L2 437 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 SAP25Q8TEE9 199 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 C10orf105Q8TEF2 133 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 DCANP1Q8TF63 244 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 CLEC2BQ92478 149 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 TOMM6Q96B49 74 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 IMMP1LQ96LU5 166 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 METTL26Q96S19 204 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 SHANK2-AS3Q9BTD1 123 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 IMUPQ9GZP8 106 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 AGPAT4-IT1Q9H0P7 198 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 C16orf95Q9H693 158 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 LINC00527Q9UJ94 153 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 KNL1Q8NG31 2342 aa2.35□□□□□ -2.03
CSDE1-216ENST00000534389 SDK2Q58EX2 2172 aa2.34□□□□□ -2.03
CSDE1-216ENST00000534389 FREM1Q5H8C1 2179 aa2.34□□□□□ -2.03
CSDE1-216ENST00000534389 DSCAML1Q8TD84 2053 aa2.34□□□□□ -2.03
CSDE1-216ENST00000534389 A0A0B4J2C4 111 aa2.34□□□□□ -2.03
CSDE1-216ENST00000534389 TRBV30A0A0K0K1B3 111 aa2.34□□□□□ -2.03
CSDE1-216ENST00000534389 H3BRN7 92 aa2.34□□□□□ -2.03
CSDE1-216ENST00000534389 H3BT86 120 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms