RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 C9JAW5 83 aa13.65□□□□□ -0.23
PHRF1-205ENST00000533464 TMEM243Q9BU79 118 aa13.64□□□□□ -0.23
PHRF1-205ENST00000533464 ADAMTSL5Q6ZMM2 481 aa13.64□□□□□ -0.23
PHRF1-205ENST00000533464 ZNF493Q6ZR52 646 aa13.64□□□□□ -0.23
PHRF1-205ENST00000533464 CENPFP49454 3210 aa13.63□□□□□ -0.23
PHRF1-205ENST00000533464 WI2-2373I1.2A0A1W2PRP0 233 aa13.63□□□□□ -0.23
PHRF1-205ENST00000533464 GAGE6Q13070 117 aa13.63□□□□□ -0.23
PHRF1-205ENST00000533464 NDUFA12Q9UI09 145 aa13.63□□□□□ -0.23
PHRF1-205ENST00000533464 PRAC2D3DTV9 90 aa13.63□□□□□ -0.23
PHRF1-205ENST00000533464 SRSF2Q01130 221 aaKnown RBP13.63□□□□□ -0.23
PHRF1-205ENST00000533464 BVES-AS1Q5T3Y7 98 aa13.63□□□□□ -0.23
PHRF1-205ENST00000533464 GTSF1Q8WW33 167 aa13.63□□□□□ -0.23
PHRF1-205ENST00000533464 CHD3Q12873 2000 aaKnown RBP13.62□□□□□ -0.23
PHRF1-205ENST00000533464 SLURP1P55000 103 aa13.62□□□□□ -0.23
PHRF1-205ENST00000533464 C9orf118A6NHY6 69 aa13.62□□□□□ -0.23
PHRF1-205ENST00000533464 C16orf54Q6UWD8 224 aa13.62□□□□□ -0.23
PHRF1-205ENST00000533464 UBE2DNLQ8IWF7 75 aa13.62□□□□□ -0.23
PHRF1-205ENST00000533464 KLF12Q9Y4X4 402 aa13.62□□□□□ -0.23
PHRF1-205ENST00000533464 CCL24O00175 119 aa13.62□□□□□ -0.23
PHRF1-205ENST00000533464 PLA2G5P39877 138 aa13.62□□□□□ -0.23
PHRF1-205ENST00000533464 LURAP1LQ8IV03 231 aa13.62□□□□□ -0.23
PHRF1-205ENST00000533464 PRSS29PA6NIE9 313 aa13.62□□□□□ -0.23
PHRF1-205ENST00000533464 RNASE13Q5GAN3 156 aaKnown RBP13.62□□□□□ -0.23
PHRF1-205ENST00000533464 KLF2Q9Y5W3 355 aaPredicted RBP13.61□□□□□ -0.23
PHRF1-205ENST00000533464 NACAE9PAV3 2078 aa13.61□□□□□ -0.23
PHRF1-205ENST00000533464 PFN2P35080 140 aa13.61□□□□□ -0.23
PHRF1-205ENST00000533464 SIRPDQ9H106 197 aa13.61□□□□□ -0.23
PHRF1-205ENST00000533464 GAGE2BQ13066 116 aa13.6□□□□□ -0.23
PHRF1-205ENST00000533464 GAGE2EQ4V326 116 aa13.6□□□□□ -0.23
PHRF1-205ENST00000533464 GAGE2DQ9UEU5 116 aa13.6□□□□□ -0.23
PHRF1-205ENST00000533464 FANCD2OSQ96PS1 177 aa13.6□□□□□ -0.23
PHRF1-205ENST00000533464 J3QQQ9 107 aa13.6□□□□□ -0.23
PHRF1-205ENST00000533464 LINC00574Q9H8X3 128 aa13.6□□□□□ -0.23
PHRF1-205ENST00000533464 APRG1Q8IVJ8 170 aa13.6□□□□□ -0.23
PHRF1-205ENST00000533464 ZNF295-AS1Q8N0V1 137 aa13.6□□□□□ -0.23
PHRF1-205ENST00000533464 ANAPC13Q9BS18 74 aa13.6□□□□□ -0.23
PHRF1-205ENST00000533464 MYO9AB2RTY4 2548 aa13.6□□□□□ -0.23
PHRF1-205ENST00000533464 NPSP0C0P6 89 aa13.59□□□□□ -0.23
PHRF1-205ENST00000533464 FRMD6-AS1P0C7T7 363 aa13.59□□□□□ -0.23
PHRF1-205ENST00000533464 LINC00173Q6ZV60 143 aa13.59□□□□□ -0.23
PHRF1-205ENST00000533464 TSSC4Q9Y5U2 329 aaPredicted RBP13.59□□□□□ -0.23
PHRF1-205ENST00000533464 U3KQE9 123 aa13.59□□□□□ -0.23
PHRF1-205ENST00000533464 ALPK3Q96L96 1907 aa13.59□□□□□ -0.23
PHRF1-205ENST00000533464 C10orf142B7Z368 130 aa13.59□□□□□ -0.23
PHRF1-205ENST00000533464 GTSF1LQ9H1H1 148 aa13.59□□□□□ -0.23
PHRF1-205ENST00000533464 LAMTOR3Q9UHA4 124 aa13.59□□□□□ -0.23
PHRF1-205ENST00000533464 HIVEP3Q5T1R4 2406 aa13.59□□□□□ -0.23
PHRF1-205ENST00000533464 RPL39LQ96EH5 51 aaKnown RBP13.58□□□□□ -0.23
PHRF1-205ENST00000533464 C2CD3Q4AC94 2353 aa13.58□□□□□ -0.23
PHRF1-205ENST00000533464 C1orf229Q6ZS94 237 aaPredicted RBP13.58□□□□□ -0.24
PHRF1-205ENST00000533464 IGKV1D-37A0A075B6S9 117 aa13.58□□□□□ -0.24
PHRF1-205ENST00000533464 NOP10Q9NPE3 64 aaKnown RBP13.58□□□□□ -0.24
PHRF1-205ENST00000533464 OCIAD2Q56VL3 154 aa13.58□□□□□ -0.24
PHRF1-205ENST00000533464 ZNF503Q96F45 646 aa13.58□□□□□ -0.24
PHRF1-205ENST00000533464 ABCA2Q9BZC7 2435 aa13.57□□□□□ -0.24
PHRF1-205ENST00000533464 TDRG1Q3Y452 100 aa13.57□□□□□ -0.24
PHRF1-205ENST00000533464 PCP2Q8IVA1 136 aa13.57□□□□□ -0.24
PHRF1-205ENST00000533464 A0A096LPF7 62 aa13.57□□□□□ -0.24
PHRF1-205ENST00000533464 KIR2DL5BA0A0G2JN68 375 aa13.57□□□□□ -0.24
PHRF1-205ENST00000533464 KIR2DL5BA0A0G2JPC4 375 aa13.57□□□□□ -0.24
PHRF1-205ENST00000533464 APOC4P55056 127 aa13.57□□□□□ -0.24
PHRF1-205ENST00000533464 KIR2DL5AQ8N109 375 aa13.57□□□□□ -0.24
PHRF1-205ENST00000533464 K7EMI3 77 aa13.56□□□□□ -0.24
PHRF1-205ENST00000533464 SPAG8Q99932 426 aaPredicted RBP13.56□□□□□ -0.24
PHRF1-205ENST00000533464 NAV3Q8IVL0 2385 aa13.56□□□□□ -0.24
PHRF1-205ENST00000533464 CEND1Q8N111 149 aa13.56□□□□□ -0.24
PHRF1-205ENST00000533464 K7ERJ3 54 aa13.56□□□□□ -0.24
PHRF1-205ENST00000533464 ETDBQ3ZM63 59 aa13.56□□□□□ -0.24
PHRF1-205ENST00000533464 PLXNB1O43157 2135 aa13.56□□□□□ -0.24
PHRF1-205ENST00000533464 TRBV20-1A0A075B6N2 111 aa13.55□□□□□ -0.24
PHRF1-205ENST00000533464 IGHG2P01859 326 aa13.55□□□□□ -0.24
PHRF1-205ENST00000533464 DEFB1P60022 68 aa13.55□□□□□ -0.24
PHRF1-205ENST00000533464 RHOHQ15669 191 aa13.55□□□□□ -0.24
PHRF1-205ENST00000533464 SPINK8P0C7L1 97 aa13.55□□□□□ -0.24
PHRF1-205ENST00000533464 OVOL2Q9BRP0 275 aa13.55□□□□□ -0.24
PHRF1-205ENST00000533464 IGHV4OR15-8A0A075B7B6 117 aa13.55□□□□□ -0.24
PHRF1-205ENST00000533464 A0A087WW49 117 aa13.55□□□□□ -0.24
PHRF1-205ENST00000533464 SIVA1O15304 175 aa13.54□□□□□ -0.24
PHRF1-205ENST00000533464 ZFAND6Q6FIF0 208 aa13.54□□□□□ -0.24
PHRF1-205ENST00000533464 PRO1854Q9UHT4 67 aa13.54□□□□□ -0.24
PHRF1-205ENST00000533464 PSCAO43653 123 aa13.54□□□□□ -0.24
PHRF1-205ENST00000533464 MUC22E2RYF6 1773 aaPredicted RBP13.54□□□□□ -0.24
PHRF1-205ENST00000533464 NXPH4O95158 308 aa13.54□□□□□ -0.24
PHRF1-205ENST00000533464 FGF6P10767 208 aa13.54□□□□□ -0.24
PHRF1-205ENST00000533464 TAL2Q16559 108 aa13.54□□□□□ -0.24
PHRF1-205ENST00000533464 SUMO4Q6EEV6 95 aa13.54□□□□□ -0.24
PHRF1-205ENST00000533464 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.53□□□□□ -0.24
PHRF1-205ENST00000533464 IGKV2-29A2NJV5 120 aaPredicted RBP13.53□□□□□ -0.24
PHRF1-205ENST00000533464 LMO4P61968 165 aa13.53□□□□□ -0.24
PHRF1-205ENST00000533464 HERVK_113P63121 156 aa13.53□□□□□ -0.24
PHRF1-205ENST00000533464 C9orf47Q6ZRZ4 202 aa13.53□□□□□ -0.24
PHRF1-205ENST00000533464 ZNF561-AS1K7EIQ3 104 aa13.53□□□□□ -0.24
PHRF1-205ENST00000533464 EIF4EBP1Q13541 118 aaPredicted RBP13.53□□□□□ -0.24
PHRF1-205ENST00000533464 UNQ9165/PRO28630Q6UXU0 137 aa13.53□□□□□ -0.24
PHRF1-205ENST00000533464 SORL1Q92673 2214 aa13.53□□□□□ -0.24
PHRF1-205ENST00000533464 A0A1W2PPM0 123 aa13.52□□□□□ -0.25
PHRF1-205ENST00000533464 K7EMT4 169 aa13.52□□□□□ -0.25
PHRF1-205ENST00000533464 K7EP34 96 aa13.52□□□□□ -0.25
PHRF1-205ENST00000533464 TRBV12-3P01733 135 aa13.52□□□□□ -0.25
PHRF1-205ENST00000533464 ZNF48Q96MX3 618 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms