RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 SAMD10Q9BYL1 202 aa13.71□□□□□ -0.21
CHKA-206ENST00000531341 TAS2R45P59539 299 aa13.7□□□□□ -0.22
CHKA-206ENST00000531341 TOR2AQ5JU69 321 aa13.7□□□□□ -0.22
CHKA-206ENST00000531341 PARLQ9H300 379 aa13.7□□□□□ -0.22
CHKA-206ENST00000531341 IGKV2D-24A0A075B6R9 120 aa13.69□□□□□ -0.22
CHKA-206ENST00000531341 ASAH1Q13510 395 aa13.69□□□□□ -0.22
CHKA-206ENST00000531341 FAM74A1Q5RGS3 127 aa13.69□□□□□ -0.22
CHKA-206ENST00000531341 OR2T35Q8NGX2 323 aa13.69□□□□□ -0.22
CHKA-206ENST00000531341 PTH2Q96A98 100 aa13.69□□□□□ -0.22
CHKA-206ENST00000531341 DAZAP1Q96EP5 407 aaKnown RBP13.69□□□□□ -0.22
CHKA-206ENST00000531341 TNXBP22105 4242 aa13.69□□□□□ -0.22
CHKA-206ENST00000531341 HMGB3O15347 200 aaKnown RBP13.68□□□□□ -0.22
CHKA-206ENST00000531341 ARL6IP6Q8N6S5 226 aa13.68□□□□□ -0.22
CHKA-206ENST00000531341 C14orf178Q8N769 122 aaPredicted RBP13.68□□□□□ -0.22
CHKA-206ENST00000531341 JPT2Q9H910 190 aa13.68□□□□□ -0.22
CHKA-206ENST00000531341 COX11Q9Y6N1 276 aa13.68□□□□□ -0.22
CHKA-206ENST00000531341 TAAR5O14804 337 aa13.67□□□□□ -0.22
CHKA-206ENST00000531341 GCGP01275 180 aa13.67□□□□□ -0.22
CHKA-206ENST00000531341 CYB561D1Q8N8Q1 229 aa13.67□□□□□ -0.22
CHKA-206ENST00000531341 SMIM3Q9BZL3 60 aa13.67□□□□□ -0.22
CHKA-206ENST00000531341 FAM240BA0A1B0GVZ2 78 aa13.66□□□□□ -0.22
CHKA-206ENST00000531341 NIT1Q86X76 327 aa13.66□□□□□ -0.22
CHKA-206ENST00000531341 LINC00479Q96M42 142 aa13.66□□□□□ -0.22
CHKA-206ENST00000531341 KLK12Q9UKR0 248 aa13.66□□□□□ -0.22
CHKA-206ENST00000531341 RPL37AP61513 92 aaKnown RBP13.65□□□□□ -0.22
CHKA-206ENST00000531341 ACOT6Q3I5F7 207 aaPredicted RBP13.65□□□□□ -0.22
CHKA-206ENST00000531341 UFSP1Q6NVU6 142 aa13.65□□□□□ -0.22
CHKA-206ENST00000531341 HSPB11Q9Y547 144 aa13.65□□□□□ -0.22
CHKA-206ENST00000531341 IGLV2-11P01706 119 aa13.64□□□□□ -0.23
CHKA-206ENST00000531341 RAB2AP61019 212 aa13.64□□□□□ -0.23
CHKA-206ENST00000531341 ZFP2Q6ZN57 461 aa13.64□□□□□ -0.23
CHKA-206ENST00000531341 UBE2WQ96B02 151 aa13.64□□□□□ -0.23
CHKA-206ENST00000531341 RMI2Q96E14 147 aa13.64□□□□□ -0.23
CHKA-206ENST00000531341 NDFIP1Q9BT67 221 aa13.64□□□□□ -0.23
CHKA-206ENST00000531341 WFDC1Q9HC57 220 aa13.64□□□□□ -0.23
CHKA-206ENST00000531341 PSG8Q9UQ74 426 aa13.64□□□□□ -0.23
CHKA-206ENST00000531341 A0A087WWC5 75 aa13.63□□□□□ -0.23
CHKA-206ENST00000531341 TCRAP04437 139 aa13.63□□□□□ -0.23
CHKA-206ENST00000531341 MT1HL1P0DM35 61 aa13.63□□□□□ -0.23
CHKA-206ENST00000531341 PQLC2Q6ZP29 291 aa13.63□□□□□ -0.23
CHKA-206ENST00000531341 SCGB1C1Q8TD33 95 aa13.63□□□□□ -0.23
CHKA-206ENST00000531341 IGKV3D-20A0A0C4DH25 116 aa13.62□□□□□ -0.23
CHKA-206ENST00000531341 A0A1W2PPV4 95 aa13.62□□□□□ -0.23
CHKA-206ENST00000531341 LGALSLQ3ZCW2 172 aaPredicted RBP13.62□□□□□ -0.23
CHKA-206ENST00000531341 SH3BGRL3Q9H299 93 aa13.62□□□□□ -0.23
CHKA-206ENST00000531341 A8MWV9 139 aa13.61□□□□□ -0.23
CHKA-206ENST00000531341 H2BFSP57053 126 aa13.61□□□□□ -0.23
CHKA-206ENST00000531341 PRNTQ86SH4 94 aa13.61□□□□□ -0.23
CHKA-206ENST00000531341 PPP1R1CQ8WVI7 109 aa13.61□□□□□ -0.23
CHKA-206ENST00000531341 URGCP-MRPS24S4R325 110 aa13.61□□□□□ -0.23
CHKA-206ENST00000531341 ARL14EPLP0DKL9 152 aa13.6□□□□□ -0.23
CHKA-206ENST00000531341 SMUG1Q53HV7 270 aa13.6□□□□□ -0.23
CHKA-206ENST00000531341 ATRAIDQ6UW56 229 aa13.6□□□□□ -0.23
CHKA-206ENST00000531341 FGF8P55075 233 aaPredicted RBP13.59□□□□□ -0.23
CHKA-206ENST00000531341 DMRTA1Q5VZB9 504 aa13.59□□□□□ -0.23
CHKA-206ENST00000531341 SERTM2A0A1B0GWG4 89 aa13.58□□□□□ -0.24
CHKA-206ENST00000531341 RPL12P30050 165 aaKnown RBP13.58□□□□□ -0.24
CHKA-206ENST00000531341 FLI1Q01543 452 aaPredicted RBP13.58□□□□□ -0.24
CHKA-206ENST00000531341 C5orf17Q8NAS9 161 aa13.58□□□□□ -0.24
CHKA-206ENST00000531341 OR10G9Q8NGN4 311 aa13.58□□□□□ -0.24
CHKA-206ENST00000531341 OR10G7Q8NGN6 311 aa13.58□□□□□ -0.24
CHKA-206ENST00000531341 MPC2O95563 127 aa13.57□□□□□ -0.24
CHKA-206ENST00000531341 S100A4P26447 101 aaKnown RBP13.57□□□□□ -0.24
CHKA-206ENST00000531341 PIK3CD-AS1Q5SR53 167 aa13.57□□□□□ -0.24
CHKA-206ENST00000531341 CCDC32Q9BV29 185 aa13.57□□□□□ -0.24
CHKA-206ENST00000531341 PANO1I0J062 215 aa13.56□□□□□ -0.24
CHKA-206ENST00000531341 SUMO1P63165 101 aaKnown RBP13.56□□□□□ -0.24
CHKA-206ENST00000531341 CYCSP99999 105 aaKnown RBP13.56□□□□□ -0.24
CHKA-206ENST00000531341 ZFP69Q49AA0 526 aa13.56□□□□□ -0.24
CHKA-206ENST00000531341 ENHOQ6UWT2 76 aa13.56□□□□□ -0.24
CHKA-206ENST00000531341 SUN5Q8TC36 379 aa13.56□□□□□ -0.24
CHKA-206ENST00000531341 EPDR1Q9UM22 224 aa13.56□□□□□ -0.24
CHKA-206ENST00000531341 A0A087WX48 190 aa13.55□□□□□ -0.24
CHKA-206ENST00000531341 STAG3L2P0CL84 134 aa13.55□□□□□ -0.24
CHKA-206ENST00000531341 STAG3L3P0CL85 134 aa13.55□□□□□ -0.24
CHKA-206ENST00000531341 MZT2BQ6NZ67 158 aa13.55□□□□□ -0.24
CHKA-206ENST00000531341 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.55□□□□□ -0.24
CHKA-206ENST00000531341 SEC11BP0C7V7 166 aa13.54□□□□□ -0.24
CHKA-206ENST00000531341 OR2G3Q8NGZ4 309 aa13.54□□□□□ -0.24
CHKA-206ENST00000531341 IL36BQ9NZH7 164 aa13.54□□□□□ -0.24
CHKA-206ENST00000531341 A0A087WWL8 130 aa13.53□□□□□ -0.24
CHKA-206ENST00000531341 TRAV34A0A0B4J273 112 aa13.53□□□□□ -0.24
CHKA-206ENST00000531341 H3BVH4 76 aa13.53□□□□□ -0.24
CHKA-206ENST00000531341 K7EQM0 130 aa13.53□□□□□ -0.24
CHKA-206ENST00000531341 GCHFRP30047 84 aa13.53□□□□□ -0.24
CHKA-206ENST00000531341 ASIPP42127 132 aa13.53□□□□□ -0.24
CHKA-206ENST00000531341 FAM74A4Q5TZK3 123 aa13.53□□□□□ -0.24
CHKA-206ENST00000531341 PRSS1P07477 247 aa13.52□□□□□ -0.25
CHKA-206ENST00000531341 CDC34P49427 236 aaPredicted RBP13.52□□□□□ -0.25
CHKA-206ENST00000531341 CRIP1P50238 77 aa13.52□□□□□ -0.25
CHKA-206ENST00000531341 ELOBQ15370 118 aa13.52□□□□□ -0.25
CHKA-206ENST00000531341 C14orf177Q52M58 125 aa13.52□□□□□ -0.25
CHKA-206ENST00000531341 CHCHD7Q9BUK0 85 aa13.52□□□□□ -0.25
CHKA-206ENST00000531341 C1orf43Q9BWL3 253 aa13.52□□□□□ -0.25
CHKA-206ENST00000531341 USP17L23D6RBM5 183 aa13.51□□□□□ -0.25
CHKA-206ENST00000531341 ARMS2P0C7Q2 107 aa13.51□□□□□ -0.25
CHKA-206ENST00000531341 Q0VG73 95 aa13.51□□□□□ -0.25
CHKA-206ENST00000531341 SAPCD1Q5SSQ6 148 aa13.51□□□□□ -0.25
CHKA-206ENST00000531341 RAB24Q969Q5 203 aa13.51□□□□□ -0.25
CHKA-206ENST00000531341 GRIFINA4D1Z8 144 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms