RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 SPXQ9BT56 116 aa9.77□□□□□ -0.85
CD44-224ENST00000526669 V9GYV3 84 aa9.77□□□□□ -0.85
CD44-224ENST00000526669 XKRY2A2RUG3 117 aa9.76□□□□□ -0.85
CD44-224ENST00000526669 M0R2P5 195 aa9.76□□□□□ -0.85
CD44-224ENST00000526669 CXCL1P09341 107 aa9.76□□□□□ -0.85
CD44-224ENST00000526669 C12orf74Q32Q52 190 aa9.76□□□□□ -0.85
CD44-224ENST00000526669 DNLZQ5SXM8 178 aa9.76□□□□□ -0.85
CD44-224ENST00000526669 IL36BQ9NZH7 164 aa9.76□□□□□ -0.85
CD44-224ENST00000526669 HTN3P15516 51 aa9.75□□□□□ -0.85
CD44-224ENST00000526669 PNRC1Q12796 327 aaPredicted RBP9.75□□□□□ -0.85
CD44-224ENST00000526669 NDUFA5Q16718 116 aa9.75□□□□□ -0.85
CD44-224ENST00000526669 RNF212Q495C1 297 aa9.75□□□□□ -0.85
CD44-224ENST00000526669 C10orf91Q5T1B1 145 aa9.75□□□□□ -0.85
CD44-224ENST00000526669 Q6ZTC4 211 aa9.75□□□□□ -0.85
CD44-224ENST00000526669 FER1L6-AS1Q8NA97 138 aa9.75□□□□□ -0.85
CD44-224ENST00000526669 OR10AG1Q8NH19 301 aa9.75□□□□□ -0.85
CD44-224ENST00000526669 PHLDA3Q9Y5J5 127 aa9.75□□□□□ -0.85
CD44-224ENST00000526669 TEX48A0A1B0GUV7 120 aa9.74□□□□□ -0.85
CD44-224ENST00000526669 A8MWL6 223 aa9.74□□□□□ -0.85
CD44-224ENST00000526669 M0R381 172 aa9.74□□□□□ -0.85
CD44-224ENST00000526669 SNAI2O43623 268 aa9.74□□□□□ -0.85
CD44-224ENST00000526669 IGHV3-53P01767 116 aa9.74□□□□□ -0.85
CD44-224ENST00000526669 APOC3P02656 99 aa9.74□□□□□ -0.85
CD44-224ENST00000526669 IGLC6P0CF74 106 aa9.74□□□□□ -0.85
CD44-224ENST00000526669 ZNF876PQ49A33 203 aa9.74□□□□□ -0.85
CD44-224ENST00000526669 LYZL1Q6UWQ5 148 aa9.74□□□□□ -0.85
CD44-224ENST00000526669 GTSF1Q8WW33 167 aa9.74□□□□□ -0.85
CD44-224ENST00000526669 CARHSP1Q9Y2V2 147 aaKnown RBP9.74□□□□□ -0.85
CD44-224ENST00000526669 CSMD3Q7Z407 3707 aa9.73□□□□□ -0.85
CD44-224ENST00000526669 TRGV2A0A075B6R0 118 aa9.73□□□□□ -0.85
CD44-224ENST00000526669 MED14OSP0DP75 135 aa9.73□□□□□ -0.85
CD44-224ENST00000526669 CT83Q5H943 113 aa9.73□□□□□ -0.85
CD44-224ENST00000526669 DMRTA1Q5VZB9 504 aa9.73□□□□□ -0.85
CD44-224ENST00000526669 LINC00612Q8N6U2 182 aa9.73□□□□□ -0.85
CD44-224ENST00000526669 PGLYRP4Q96LB8 373 aa9.73□□□□□ -0.85
CD44-224ENST00000526669 JPT2Q9H910 190 aa9.73□□□□□ -0.85
CD44-224ENST00000526669 SCRT2Q9NQ03 307 aa9.73□□□□□ -0.85
CD44-224ENST00000526669 OR5AL1P0C617 328 aa9.72□□□□□ -0.85
CD44-224ENST00000526669 LGALS9BQ3B8N2 356 aa9.72□□□□□ -0.85
CD44-224ENST00000526669 SPANXN1Q5VSR9 72 aa9.72□□□□□ -0.85
CD44-224ENST00000526669 SYT8Q8NBV8 401 aa9.72□□□□□ -0.85
CD44-224ENST00000526669 TSKUQ8WUA8 353 aa9.72□□□□□ -0.85
CD44-224ENST00000526669 WWC2-AS2Q96NR7 200 aa9.72□□□□□ -0.85
CD44-224ENST00000526669 STARD9Q9P2P6 4700 aa9.72□□□□□ -0.85
CD44-224ENST00000526669 A0A1W2PPQ1 181 aa9.71□□□□□ -0.86
CD44-224ENST00000526669 MT-ND4LP03901 98 aa9.71□□□□□ -0.86
CD44-224ENST00000526669 ZFAND6Q6FIF0 208 aa9.71□□□□□ -0.86
CD44-224ENST00000526669 ZFP82Q8N141 532 aa9.71□□□□□ -0.86
CD44-224ENST00000526669 CLRN3Q8NCR9 226 aa9.71□□□□□ -0.86
CD44-224ENST00000526669 RASL10AQ92737 203 aa9.71□□□□□ -0.86
CD44-224ENST00000526669 SSBP4Q9BWG4 385 aaPredicted RBP9.71□□□□□ -0.86
CD44-224ENST00000526669 IGHV3-73A0A0B4J1V6 119 aa9.7□□□□□ -0.86
CD44-224ENST00000526669 HIGD1CA8MV81 97 aa9.7□□□□□ -0.86
CD44-224ENST00000526669 PPP1R2P9O14990 202 aa9.7□□□□□ -0.86
CD44-224ENST00000526669 CTRLP40313 264 aa9.7□□□□□ -0.86
CD44-224ENST00000526669 POM121L12Q8N7R1 296 aa9.7□□□□□ -0.86
CD44-224ENST00000526669 ANAPC16Q96DE5 110 aa9.7□□□□□ -0.86
CD44-224ENST00000526669 ZNF479Q96JC4 524 aa9.7□□□□□ -0.86
CD44-224ENST00000526669 MSRB1Q9NZV6 116 aa9.7□□□□□ -0.86
CD44-224ENST00000526669 PLECQ15149 4684 aaKnown RBP9.7□□□□□ -0.86
CD44-224ENST00000526669 TRAV4A0A0B4J268 109 aa9.69□□□□□ -0.86
CD44-224ENST00000526669 F5H768 121 aa9.69□□□□□ -0.86
CD44-224ENST00000526669 RS1O15537 224 aa9.69□□□□□ -0.86
CD44-224ENST00000526669 ATP5G1P05496 136 aa9.69□□□□□ -0.86
CD44-224ENST00000526669 CFAP126Q5VTH2 177 aa9.69□□□□□ -0.86
CD44-224ENST00000526669 NUP35Q8NFH5 326 aa9.69□□□□□ -0.86
CD44-224ENST00000526669 OR4C5Q8NGB2 326 aa9.69□□□□□ -0.86
CD44-224ENST00000526669 PHLDA1Q8WV24 401 aaPredicted RBP9.69□□□□□ -0.86
CD44-224ENST00000526669 SAMD10Q9BYL1 202 aa9.69□□□□□ -0.86
CD44-224ENST00000526669 RPS10P5Q9NQ39 176 aa9.69□□□□□ -0.86
CD44-224ENST00000526669 A0A087WWL8 130 aa9.68□□□□□ -0.86
CD44-224ENST00000526669 DEFB131BA0A096LNP1 70 aa9.68□□□□□ -0.86
CD44-224ENST00000526669 TRAV10A0A0B4J240 114 aa9.68□□□□□ -0.86
CD44-224ENST00000526669 SMIM27A0A1W2PRY6 76 aa9.68□□□□□ -0.86
CD44-224ENST00000526669 C7orf77A4D0Y5 90 aa9.68□□□□□ -0.86
CD44-224ENST00000526669 F2Z2F3 143 aa9.68□□□□□ -0.86
CD44-224ENST00000526669 NXPH4O95158 308 aa9.68□□□□□ -0.86
CD44-224ENST00000526669 HOXA5P20719 270 aa9.68□□□□□ -0.86
CD44-224ENST00000526669 CACNG7P62955 275 aa9.68□□□□□ -0.86
CD44-224ENST00000526669 FAM74A4Q5TZK3 123 aa9.68□□□□□ -0.86
CD44-224ENST00000526669 PTH2Q96A98 100 aa9.68□□□□□ -0.86
CD44-224ENST00000526669 GFRA4Q9GZZ7 299 aa9.68□□□□□ -0.86
CD44-224ENST00000526669 NTF3P20783 257 aa9.67□□□□□ -0.86
CD44-224ENST00000526669 FAM3BP58499 235 aaPredicted RBP9.67□□□□□ -0.86
CD44-224ENST00000526669 TWIST1Q15672 202 aa9.67□□□□□ -0.86
CD44-224ENST00000526669 SVBPQ8N300 66 aa9.67□□□□□ -0.86
CD44-224ENST00000526669 MUC7Q8TAX7 377 aa9.67□□□□□ -0.86
CD44-224ENST00000526669 BORCS7Q96B45 105 aa9.67□□□□□ -0.86
CD44-224ENST00000526669 NAT8BQ9UHF3 227 aa9.67□□□□□ -0.86
CD44-224ENST00000526669 TRGV4A0A0C4DH28 118 aa9.66□□□□□ -0.86
CD44-224ENST00000526669 FAM231BA6NCW3 169 aa9.66□□□□□ -0.86
CD44-224ENST00000526669 A8MWV9 139 aa9.66□□□□□ -0.86
CD44-224ENST00000526669 SNAPINO95295 136 aa9.66□□□□□ -0.86
CD44-224ENST00000526669 FOXA3P55318 350 aaPredicted RBP9.66□□□□□ -0.86
CD44-224ENST00000526669 RHEBQ15382 184 aa9.66□□□□□ -0.86
CD44-224ENST00000526669 MRPL54Q6P161 138 aaKnown RBP9.66□□□□□ -0.86
CD44-224ENST00000526669 ATRAIDQ6UW56 229 aa9.66□□□□□ -0.86
CD44-224ENST00000526669 TENM2Q9NT68 2774 aa9.65□□□□□ -0.86
CD44-224ENST00000526669 A0A0J9YY99 117 aa9.65□□□□□ -0.86
CD44-224ENST00000526669 A0A1B0GUT8 65 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms