RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 ASIPP42127 132 aa12.62□□□□□ -0.39
CAPN1-203ENST00000525013 Q6ZRN7 208 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-203ENST00000525013 OR11H4Q8NGC9 324 aa12.62□□□□□ -0.39
CAPN1-203ENST00000525013 FAM213BQ8TBF2 198 aa12.62□□□□□ -0.39
CAPN1-203ENST00000525013 SFT2D1Q8WV19 159 aa12.62□□□□□ -0.39
CAPN1-203ENST00000525013 PTH2Q96A98 100 aa12.62□□□□□ -0.39
CAPN1-203ENST00000525013 FMC1Q96HJ9 113 aa12.62□□□□□ -0.39
CAPN1-203ENST00000525013 ZNF471Q9BX82 626 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-203ENST00000525013 A0A0D9SG52 128 aa12.61□□□□□ -0.39
CAPN1-203ENST00000525013 KANTRA0A1W2PQU2 76 aa12.61□□□□□ -0.39
CAPN1-203ENST00000525013 B4DEV8 164 aa12.61□□□□□ -0.39
CAPN1-203ENST00000525013 KRTAP10-2P60368 255 aa12.61□□□□□ -0.39
CAPN1-203ENST00000525013 RHOHQ15669 191 aa12.61□□□□□ -0.39
CAPN1-203ENST00000525013 LGALSLQ3ZCW2 172 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-203ENST00000525013 NFE4Q86UQ8 179 aa12.61□□□□□ -0.39
CAPN1-203ENST00000525013 ZC2HC1AQ96GY0 325 aa12.61□□□□□ -0.39
CAPN1-203ENST00000525013 ZFP30Q9Y2G7 519 aa12.61□□□□□ -0.39
CAPN1-203ENST00000525013 PCLOQ9Y6V0 5065 aa12.6□□□□□ -0.39
CAPN1-203ENST00000525013 A0A1B0GV50 99 aa12.6□□□□□ -0.39
CAPN1-203ENST00000525013 TRBV6-4A0A1B0GX49 114 aa12.6□□□□□ -0.39
CAPN1-203ENST00000525013 M0R036 132 aa12.6□□□□□ -0.39
CAPN1-203ENST00000525013 SEC11BP0C7V7 166 aa12.6□□□□□ -0.39
CAPN1-203ENST00000525013 DNAH10OSP0CZ25 163 aa12.6□□□□□ -0.39
CAPN1-203ENST00000525013 CRIP1P50238 77 aa12.6□□□□□ -0.39
CAPN1-203ENST00000525013 UMAD1C9J7I0 102 aa12.59□□□□□ -0.39
CAPN1-203ENST00000525013 H3BVH4 76 aa12.59□□□□□ -0.39
CAPN1-203ENST00000525013 K7EP13 123 aa12.59□□□□□ -0.39
CAPN1-203ENST00000525013 EREGO14944 169 aa12.59□□□□□ -0.39
CAPN1-203ENST00000525013 BCL2L11O43521 198 aa12.59□□□□□ -0.39
CAPN1-203ENST00000525013 PAGE4O60829 102 aa12.59□□□□□ -0.39
CAPN1-203ENST00000525013 SH2D1AO60880 128 aa12.59□□□□□ -0.39
CAPN1-203ENST00000525013 CRYGDP07320 174 aa12.59□□□□□ -0.39
CAPN1-203ENST00000525013 AKR1C3P42330 323 aa12.59□□□□□ -0.39
CAPN1-203ENST00000525013 TIRAPP58753 221 aa12.59□□□□□ -0.39
CAPN1-203ENST00000525013 FAM162BQ5T6X4 162 aa12.59□□□□□ -0.39
CAPN1-203ENST00000525013 TCEAL7Q9BRU2 100 aa12.59□□□□□ -0.39
CAPN1-203ENST00000525013 MSRB1Q9NZV6 116 aa12.59□□□□□ -0.39
CAPN1-203ENST00000525013 A8MWV9 139 aa12.58□□□□□ -0.4
CAPN1-203ENST00000525013 KRBOX1C9JBD0 128 aa12.58□□□□□ -0.4
CAPN1-203ENST00000525013 PFDN1O60925 122 aa12.58□□□□□ -0.4
CAPN1-203ENST00000525013 MGST1P10620 155 aaKnown RBP12.58□□□□□ -0.4
CAPN1-203ENST00000525013 RYR1P21817 5038 aa12.58□□□□□ -0.4
CAPN1-203ENST00000525013 PARLQ9H300 379 aa12.58□□□□□ -0.4
CAPN1-203ENST00000525013 IL36BQ9NZH7 164 aa12.58□□□□□ -0.4
CAPN1-203ENST00000525013 TRAV8-6A0A0B4J262 113 aa12.57□□□□□ -0.4
CAPN1-203ENST00000525013 IGHV3-38A0A0C4DH36 116 aa12.57□□□□□ -0.4
CAPN1-203ENST00000525013 GRIFINA4D1Z8 144 aa12.57□□□□□ -0.4
CAPN1-203ENST00000525013 CDK2AP2O75956 126 aa12.57□□□□□ -0.4
CAPN1-203ENST00000525013 ERVFC1-1P60608 527 aa12.57□□□□□ -0.4
CAPN1-203ENST00000525013 OR10J3Q5JRS4 329 aa12.57□□□□□ -0.4
CAPN1-203ENST00000525013 COX8CQ7Z4L0 72 aa12.57□□□□□ -0.4
CAPN1-203ENST00000525013 C10orf126Q8N4M7 172 aa12.57□□□□□ -0.4
CAPN1-203ENST00000525013 MBD3L1Q8WWY6 194 aa12.57□□□□□ -0.4
CAPN1-203ENST00000525013 TMSB15BA0A087X1C1 80 aa12.56□□□□□ -0.4
CAPN1-203ENST00000525013 LTAP01374 205 aa12.56□□□□□ -0.4
CAPN1-203ENST00000525013 ARMS2P0C7Q2 107 aa12.56□□□□□ -0.4
CAPN1-203ENST00000525013 EIF5AP63241 154 aaKnown RBP12.56□□□□□ -0.4
CAPN1-203ENST00000525013 PIK3CD-AS1Q5SR53 167 aa12.56□□□□□ -0.4
CAPN1-203ENST00000525013 ZFP2Q6ZN57 461 aa12.56□□□□□ -0.4
CAPN1-203ENST00000525013 Q6ZSN1 163 aa12.56□□□□□ -0.4
CAPN1-203ENST00000525013 SYT8Q8NBV8 401 aa12.56□□□□□ -0.4
CAPN1-203ENST00000525013 ATP6V0E2Q8NHE4 81 aa12.56□□□□□ -0.4
CAPN1-203ENST00000525013 JPT2Q9H910 190 aa12.56□□□□□ -0.4
CAPN1-203ENST00000525013 LRP1BQ9NZR2 4599 aa12.56□□□□□ -0.4
CAPN1-203ENST00000525013 TRBV6-1A0A0K0K1D8 114 aa12.55□□□□□ -0.4
CAPN1-203ENST00000525013 H2AFB1P0C5Y9 115 aa12.55□□□□□ -0.4
CAPN1-203ENST00000525013 ZNF674Q2M3X9 581 aa12.55□□□□□ -0.4
CAPN1-203ENST00000525013 DMRTA1Q5VZB9 504 aa12.55□□□□□ -0.4
CAPN1-203ENST00000525013 TMUB2Q71RG4 321 aa12.55□□□□□ -0.4
CAPN1-203ENST00000525013 PHLDA3Q9Y5J5 127 aa12.55□□□□□ -0.4
CAPN1-203ENST00000525013 DNLZQ5SXM8 178 aa12.54□□□□□ -0.4
CAPN1-203ENST00000525013 SAMD10Q9BYL1 202 aa12.54□□□□□ -0.4
CAPN1-203ENST00000525013 GTSF1LQ9H1H1 148 aa12.54□□□□□ -0.4
CAPN1-203ENST00000525013 SCO2A0A1W2PP80 73 aa12.53□□□□□ -0.4
CAPN1-203ENST00000525013 GAGE12JA6NER3 117 aa12.53□□□□□ -0.4
CAPN1-203ENST00000525013 S100A9P06702 114 aaKnown RBP12.53□□□□□ -0.4
CAPN1-203ENST00000525013 TPT1P13693 172 aaKnown RBP12.53□□□□□ -0.4
CAPN1-203ENST00000525013 FUSP35637 526 aaKnown RBP eCLIP12.53□□□□□ -0.4
CAPN1-203ENST00000525013 GAGE1Q13065 139 aa12.53□□□□□ -0.4
CAPN1-203ENST00000525013 GAGE4Q13068 117 aa12.53□□□□□ -0.4
CAPN1-203ENST00000525013 GAGE5Q13069 117 aa12.53□□□□□ -0.4
CAPN1-203ENST00000525013 GAGE13Q4V321 117 aa12.53□□□□□ -0.4
CAPN1-203ENST00000525013 LINC01556Q5JQF7 62 aa12.53□□□□□ -0.4
CAPN1-203ENST00000525013 LELP1Q5T871 98 aa12.53□□□□□ -0.4
CAPN1-203ENST00000525013 FAM74A4Q5TZK3 123 aa12.53□□□□□ -0.4
CAPN1-203ENST00000525013 HSPG2P98160 4391 aa12.53□□□□□ -0.4
CAPN1-203ENST00000525013 A0A087WTM6 91 aa12.52□□□□□ -0.41
CAPN1-203ENST00000525013 LINC01559Q495D7 138 aa12.52□□□□□ -0.41
CAPN1-203ENST00000525013 PGPEP1Q9NXJ5 209 aa12.52□□□□□ -0.41
CAPN1-203ENST00000525013 BOLA1Q9Y3E2 137 aa12.52□□□□□ -0.41
CAPN1-203ENST00000525013 M0R381 172 aa12.51□□□□□ -0.41
CAPN1-203ENST00000525013 RHODO00212 210 aa12.51□□□□□ -0.41
CAPN1-203ENST00000525013 IGHV3-30P01768 117 aa12.51□□□□□ -0.41
CAPN1-203ENST00000525013 IGHV3-33P01772 117 aa12.51□□□□□ -0.41
CAPN1-203ENST00000525013 IGHV3-30-3P0DP02 117 aa12.51□□□□□ -0.41
CAPN1-203ENST00000525013 IGHV3-30-5P0DP03 117 aa12.51□□□□□ -0.41
CAPN1-203ENST00000525013 C14orf178Q8N769 122 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-203ENST00000525013 MAPKAPK5-AS1Q8N8E1 139 aa12.51□□□□□ -0.41
CAPN1-203ENST00000525013 A0A087WWL8 130 aa12.5□□□□□ -0.41
CAPN1-203ENST00000525013 UFSP1Q6NVU6 142 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms