RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 C6orf223Q8N319 242 aa9.79□□□□□ -0.84
VEGFA-221ENST00000520265 C9orf85Q96MD7 179 aa9.79□□□□□ -0.84
VEGFA-221ENST00000520265 TXNDC17Q9BRA2 123 aa9.79□□□□□ -0.84
VEGFA-221ENST00000520265 MANBALQ9NQG1 85 aa9.79□□□□□ -0.84
VEGFA-221ENST00000520265 PGPEP1LA6NFU8 196 aa9.78□□□□□ -0.84
VEGFA-221ENST00000520265 LTAP01374 205 aa9.78□□□□□ -0.84
VEGFA-221ENST00000520265 RNASE3P12724 160 aaKnown RBP9.78□□□□□ -0.84
VEGFA-221ENST00000520265 SYT8Q8NBV8 401 aa9.78□□□□□ -0.84
VEGFA-221ENST00000520265 PRADC1Q9BSG0 188 aa9.78□□□□□ -0.84
VEGFA-221ENST00000520265 UPK3BQ9BT76 320 aa9.78□□□□□ -0.84
VEGFA-221ENST00000520265 SIVA1O15304 175 aa9.77□□□□□ -0.85
VEGFA-221ENST00000520265 IFNA1P01562 189 aa9.77□□□□□ -0.85
VEGFA-221ENST00000520265 S100A9P06702 114 aaKnown RBP9.77□□□□□ -0.85
VEGFA-221ENST00000520265 CCL20P78556 96 aa9.77□□□□□ -0.85
VEGFA-221ENST00000520265 CFAP126Q5VTH2 177 aa9.77□□□□□ -0.85
VEGFA-221ENST00000520265 BAGE2Q86Y30 109 aa9.77□□□□□ -0.85
VEGFA-221ENST00000520265 BIRC6Q9NR09 4857 aa9.76□□□□□ -0.85
VEGFA-221ENST00000520265 KRBOX1C9JBD0 128 aa9.76□□□□□ -0.85
VEGFA-221ENST00000520265 RS1O15537 224 aa9.76□□□□□ -0.85
VEGFA-221ENST00000520265 ARMS2P0C7Q2 107 aa9.76□□□□□ -0.85
VEGFA-221ENST00000520265 SULT1A2P50226 295 aa9.76□□□□□ -0.85
VEGFA-221ENST00000520265 CRIP1P50238 77 aa9.76□□□□□ -0.85
VEGFA-221ENST00000520265 FAM74A4Q5TZK3 123 aa9.76□□□□□ -0.85
VEGFA-221ENST00000520265 LYPD5Q6UWN5 251 aa9.76□□□□□ -0.85
VEGFA-221ENST00000520265 PHLDA3Q9Y5J5 127 aa9.76□□□□□ -0.85
VEGFA-221ENST00000520265 TRBV6-1A0A0K0K1D8 114 aa9.75□□□□□ -0.85
VEGFA-221ENST00000520265 M0R381 172 aa9.75□□□□□ -0.85
VEGFA-221ENST00000520265 MGST1P10620 155 aaKnown RBP9.75□□□□□ -0.85
VEGFA-221ENST00000520265 GATA1P15976 413 aaPredicted RBP9.75□□□□□ -0.85
VEGFA-221ENST00000520265 RHOHQ15669 191 aa9.75□□□□□ -0.85
VEGFA-221ENST00000520265 SLC25A29Q8N8R3 303 aa9.75□□□□□ -0.85
VEGFA-221ENST00000520265 IL36BQ9NZH7 164 aa9.75□□□□□ -0.85
VEGFA-221ENST00000520265 A8MWV9 139 aa9.74□□□□□ -0.85
VEGFA-221ENST00000520265 RPL35P42766 123 aaKnown RBP9.74□□□□□ -0.85
VEGFA-221ENST00000520265 RPL19P84098 196 aaKnown RBP9.74□□□□□ -0.85
VEGFA-221ENST00000520265 ZNF674Q2M3X9 581 aa9.74□□□□□ -0.85
VEGFA-221ENST00000520265 C9orf62Q8N4C0 152 aa9.74□□□□□ -0.85
VEGFA-221ENST00000520265 KRTAP1-5Q9BYS1 174 aa9.74□□□□□ -0.85
VEGFA-221ENST00000520265 CIDEAO60543 219 aa9.73□□□□□ -0.85
VEGFA-221ENST00000520265 LINC01559Q495D7 138 aa9.73□□□□□ -0.85
VEGFA-221ENST00000520265 SH2D6Q7Z4S9 175 aa9.73□□□□□ -0.85
VEGFA-221ENST00000520265 WFDC10BQ8IUB3 73 aa9.73□□□□□ -0.85
VEGFA-221ENST00000520265 DERL1Q9BUN8 251 aa9.73□□□□□ -0.85
VEGFA-221ENST00000520265 PARLQ9H300 379 aa9.73□□□□□ -0.85
VEGFA-221ENST00000520265 JPT2Q9H910 190 aa9.73□□□□□ -0.85
VEGFA-221ENST00000520265 A0A087WWL8 130 aa9.72□□□□□ -0.85
VEGFA-221ENST00000520265 TRAV1-1A0A0B4J248 108 aa9.72□□□□□ -0.85
VEGFA-221ENST00000520265 A0A1W2PPQ1 181 aa9.72□□□□□ -0.85
VEGFA-221ENST00000520265 GAGE12JA6NER3 117 aa9.72□□□□□ -0.85
VEGFA-221ENST00000520265 NKX2-5P52952 324 aaPredicted RBP9.72□□□□□ -0.85
VEGFA-221ENST00000520265 SSTP61278 116 aa9.72□□□□□ -0.85
VEGFA-221ENST00000520265 MEF2BQ02080 365 aaPredicted RBP9.72□□□□□ -0.85
VEGFA-221ENST00000520265 TNP2Q05952 138 aa9.72□□□□□ -0.85
VEGFA-221ENST00000520265 GAGE1Q13065 139 aa9.72□□□□□ -0.85
VEGFA-221ENST00000520265 GAGE4Q13068 117 aa9.72□□□□□ -0.85
VEGFA-221ENST00000520265 GAGE5Q13069 117 aa9.72□□□□□ -0.85
VEGFA-221ENST00000520265 GAGE13Q4V321 117 aa9.72□□□□□ -0.85
VEGFA-221ENST00000520265 CENPWQ5EE01 88 aa9.72□□□□□ -0.85
VEGFA-221ENST00000520265 DMRTA1Q5VZB9 504 aa9.72□□□□□ -0.85
VEGFA-221ENST00000520265 ALKAL2Q6UX46 152 aa9.72□□□□□ -0.85
VEGFA-221ENST00000520265 COX8CQ7Z4L0 72 aa9.72□□□□□ -0.85
VEGFA-221ENST00000520265 ZFP82Q8N141 532 aa9.72□□□□□ -0.85
VEGFA-221ENST00000520265 MED9Q9NWA0 146 aa9.72□□□□□ -0.85
VEGFA-221ENST00000520265 LY96Q9Y6Y9 160 aa9.72□□□□□ -0.85
VEGFA-221ENST00000520265 TRAV9-2A0A087WT02 112 aa9.71□□□□□ -0.86
VEGFA-221ENST00000520265 A0A1B0GVG6 124 aa9.71□□□□□ -0.86
VEGFA-221ENST00000520265 TRBV6-4A0A1B0GX49 114 aa9.71□□□□□ -0.86
VEGFA-221ENST00000520265 BCL2P10415 239 aa9.71□□□□□ -0.86
VEGFA-221ENST00000520265 GNG4P50150 75 aa9.71□□□□□ -0.86
VEGFA-221ENST00000520265 LINC00315P59091 139 aa9.71□□□□□ -0.86
VEGFA-221ENST00000520265 OR10J3Q5JRS4 329 aa9.71□□□□□ -0.86
VEGFA-221ENST00000520265 PTH2Q96A98 100 aa9.71□□□□□ -0.86
VEGFA-221ENST00000520265 DAZAP1Q96EP5 407 aaKnown RBP9.71□□□□□ -0.86
VEGFA-221ENST00000520265 TPPP3Q9BW30 176 aa9.71□□□□□ -0.86
VEGFA-221ENST00000520265 DNAH10Q8IVF4 4471 aa9.71□□□□□ -0.86
VEGFA-221ENST00000520265 MUC21A0A0G2JKD1 596 aa9.7□□□□□ -0.86
VEGFA-221ENST00000520265 MUC21A0A140T8X8 626 aa9.7□□□□□ -0.86
VEGFA-221ENST00000520265 RHODO00212 210 aa9.7□□□□□ -0.86
VEGFA-221ENST00000520265 PDE6DO43924 150 aa9.7□□□□□ -0.86
VEGFA-221ENST00000520265 EVI2AP22794 236 aa9.7□□□□□ -0.86
VEGFA-221ENST00000520265 SAMD10Q9BYL1 202 aa9.7□□□□□ -0.86
VEGFA-221ENST00000520265 VAX2Q9UIW0 290 aa9.7□□□□□ -0.86
VEGFA-221ENST00000520265 TRAV8-6A0A0B4J262 113 aa9.69□□□□□ -0.86
VEGFA-221ENST00000520265 A0A1B0GVY2 172 aa9.69□□□□□ -0.86
VEGFA-221ENST00000520265 RAB19A4D1S5 217 aa9.69□□□□□ -0.86
VEGFA-221ENST00000520265 SPANXN1Q5VSR9 72 aa9.69□□□□□ -0.86
VEGFA-221ENST00000520265 ATP6V0E2Q8NHE4 81 aa9.69□□□□□ -0.86
VEGFA-221ENST00000520265 C11orf52Q96A22 123 aa9.69□□□□□ -0.86
VEGFA-221ENST00000520265 HECTD4Q9Y4D8 3996 aa9.68□□□□□ -0.86
VEGFA-221ENST00000520265 CEBPGP53567 150 aa9.68□□□□□ -0.86
VEGFA-221ENST00000520265 ZNF56Q15929 161 aa9.68□□□□□ -0.86
VEGFA-221ENST00000520265 DNLZQ5SXM8 178 aa9.68□□□□□ -0.86
VEGFA-221ENST00000520265 ZFP2Q6ZN57 461 aa9.68□□□□□ -0.86
VEGFA-221ENST00000520265 Q6ZSN1 163 aa9.68□□□□□ -0.86
VEGFA-221ENST00000520265 C14orf178Q8N769 122 aaPredicted RBP9.68□□□□□ -0.86
VEGFA-221ENST00000520265 CRYGDP07320 174 aa9.67□□□□□ -0.86
VEGFA-221ENST00000520265 PIK3CD-AS1Q5SR53 167 aa9.67□□□□□ -0.86
VEGFA-221ENST00000520265 ZNF575Q86XF7 245 aa9.67□□□□□ -0.86
VEGFA-221ENST00000520265 OR2D3Q8NGH3 330 aa9.67□□□□□ -0.86
VEGFA-221ENST00000520265 OR10AG1Q8NH19 301 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms