RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 C18orf15Q96N68 181 aa8.32□□□□□ -1.08
HPS4-218ENST00000519774 MUC4Q99102 2169 aa8.32□□□□□ -1.08
HPS4-218ENST00000519774 NUDT3O95989 172 aa8.31□□□□□ -1.08
HPS4-218ENST00000519774 ZNF876PQ49A33 203 aa8.31□□□□□ -1.08
HPS4-218ENST00000519774 C15orf53Q8NAA6 179 aa8.31□□□□□ -1.08
HPS4-218ENST00000519774 DAZAP1Q96EP5 407 aaKnown RBP8.31□□□□□ -1.08
HPS4-218ENST00000519774 ZNF479Q96JC4 524 aa8.31□□□□□ -1.08
HPS4-218ENST00000519774 TRAV4A0A0B4J268 109 aa8.3□□□□□ -1.08
HPS4-218ENST00000519774 TRGV4A0A0C4DH28 118 aa8.3□□□□□ -1.08
HPS4-218ENST00000519774 ARMS2P0C7Q2 107 aa8.3□□□□□ -1.08
HPS4-218ENST00000519774 OR4C5Q8NGB2 326 aa8.3□□□□□ -1.08
HPS4-218ENST00000519774 SMIM12Q96EX1 92 aa8.3□□□□□ -1.08
HPS4-218ENST00000519774 IL36BQ9NZH7 164 aa8.3□□□□□ -1.08
HPS4-218ENST00000519774 SRP19P09132 144 aaKnown RBP8.29□□□□□ -1.08
HPS4-218ENST00000519774 RAB14P61106 215 aa8.29□□□□□ -1.08
HPS4-218ENST00000519774 DNLZQ5SXM8 178 aa8.29□□□□□ -1.08
HPS4-218ENST00000519774 LGALS9CQ6DKI2 356 aa8.29□□□□□ -1.08
HPS4-218ENST00000519774 POM121L12Q8N7R1 296 aa8.29□□□□□ -1.08
HPS4-218ENST00000519774 SMIM7Q9BQ49 75 aa8.29□□□□□ -1.08
HPS4-218ENST00000519774 BIN3Q9NQY0 253 aa8.29□□□□□ -1.08
HPS4-218ENST00000519774 PHLDA3Q9Y5J5 127 aa8.29□□□□□ -1.08
HPS4-218ENST00000519774 NACAE9PAV3 2078 aa8.28□□□□□ -1.08
HPS4-218ENST00000519774 C19orf71A6NCJ1 209 aa8.28□□□□□ -1.08
HPS4-218ENST00000519774 M0R381 172 aa8.28□□□□□ -1.08
HPS4-218ENST00000519774 P01737 135 aa8.28□□□□□ -1.08
HPS4-218ENST00000519774 FHL2Q14192 279 aa8.28□□□□□ -1.08
HPS4-218ENST00000519774 UBE2DNLQ8IWF7 75 aa8.28□□□□□ -1.08
HPS4-218ENST00000519774 SYT8Q8NBV8 401 aa8.28□□□□□ -1.08
HPS4-218ENST00000519774 OR2D3Q8NGH3 330 aa8.28□□□□□ -1.08
HPS4-218ENST00000519774 OCC1Q8TAD7 63 aa8.28□□□□□ -1.08
HPS4-218ENST00000519774 DYNC2H1Q8NCM8 4307 aaKnown RBP8.28□□□□□ -1.08
HPS4-218ENST00000519774 IGHV3-73A0A0B4J1V6 119 aa8.27□□□□□ -1.09
HPS4-218ENST00000519774 ZNF727A8MUV8 499 aa8.27□□□□□ -1.09
HPS4-218ENST00000519774 K7EN84 100 aa8.27□□□□□ -1.09
HPS4-218ENST00000519774 RS1O15537 224 aa8.27□□□□□ -1.09
HPS4-218ENST00000519774 PAX4O43316 350 aa8.27□□□□□ -1.09
HPS4-218ENST00000519774 CXCL1P09341 107 aa8.27□□□□□ -1.09
HPS4-218ENST00000519774 P0DMU3 169 aa8.27□□□□□ -1.09
HPS4-218ENST00000519774 FAM231AP0DMU4 169 aa8.27□□□□□ -1.09
HPS4-218ENST00000519774 FAM231CP0DMU5 169 aa8.27□□□□□ -1.09
HPS4-218ENST00000519774 GZMBP10144 247 aa8.27□□□□□ -1.09
HPS4-218ENST00000519774 SRSF3P84103 164 aaKnown RBP8.27□□□□□ -1.09
HPS4-218ENST00000519774 CFAP126Q5VTH2 177 aa8.27□□□□□ -1.09
HPS4-218ENST00000519774 ZNF575Q86XF7 245 aa8.27□□□□□ -1.09
HPS4-218ENST00000519774 PTH2Q96A98 100 aa8.27□□□□□ -1.09
HPS4-218ENST00000519774 VSIG2Q96IQ7 327 aa8.27□□□□□ -1.09
HPS4-218ENST00000519774 PRO0255Q9UI72 69 aa8.27□□□□□ -1.09
HPS4-218ENST00000519774 HHLA3Q9XRX5 114 aa8.27□□□□□ -1.09
HPS4-218ENST00000519774 ALMS1Q8TCU4 4167 aa8.27□□□□□ -1.09
HPS4-218ENST00000519774 LYSTQ99698 3801 aa8.26□□□□□ -1.09
HPS4-218ENST00000519774 MUC21A0A0G2JKD1 596 aa8.26□□□□□ -1.09
HPS4-218ENST00000519774 MUC21A0A140T8X8 626 aa8.26□□□□□ -1.09
HPS4-218ENST00000519774 FAM229AH3BQW9 127 aa8.26□□□□□ -1.09
HPS4-218ENST00000519774 NDUFS6O75380 124 aaKnown RBP8.26□□□□□ -1.09
HPS4-218ENST00000519774 CRYBA4P53673 196 aa8.26□□□□□ -1.09
HPS4-218ENST00000519774 RPS20P60866 119 aaKnown RBP8.26□□□□□ -1.09
HPS4-218ENST00000519774 IFITM2Q01629 132 aa8.26□□□□□ -1.09
HPS4-218ENST00000519774 SLAQ13239 276 aa8.26□□□□□ -1.09
HPS4-218ENST00000519774 PEA15Q15121 130 aa8.26□□□□□ -1.09
HPS4-218ENST00000519774 ZFP82Q8N141 532 aa8.26□□□□□ -1.09
HPS4-218ENST00000519774 TPPP3Q9BW30 176 aa8.26□□□□□ -1.09
HPS4-218ENST00000519774 RNASE7Q9H1E1 156 aaKnown RBP8.26□□□□□ -1.09
HPS4-218ENST00000519774 JPT2Q9H910 190 aa8.26□□□□□ -1.09
HPS4-218ENST00000519774 SCRT2Q9NQ03 307 aa8.26□□□□□ -1.09
HPS4-218ENST00000519774 A8MWV9 139 aa8.25□□□□□ -1.09
HPS4-218ENST00000519774 C9JQL5 133 aa8.25□□□□□ -1.09
HPS4-218ENST00000519774 H3BNG1 76 aa8.25□□□□□ -1.09
HPS4-218ENST00000519774 MED14OSP0DP75 135 aa8.25□□□□□ -1.09
HPS4-218ENST00000519774 GATA1P15976 413 aaPredicted RBP8.25□□□□□ -1.09
HPS4-218ENST00000519774 SSTP61278 116 aa8.25□□□□□ -1.09
HPS4-218ENST00000519774 NUDT10Q8NFP7 164 aa8.25□□□□□ -1.09
HPS4-218ENST00000519774 OR10AG1Q8NH19 301 aa8.25□□□□□ -1.09
HPS4-218ENST00000519774 NUDT11Q96G61 164 aa8.25□□□□□ -1.09
HPS4-218ENST00000519774 ICOSQ9Y6W8 199 aa8.25□□□□□ -1.09
HPS4-218ENST00000519774 PLECQ15149 4684 aaKnown RBP8.24□□□□□ -1.09
HPS4-218ENST00000519774 A0A096LPF7 62 aa8.24□□□□□ -1.09
HPS4-218ENST00000519774 XKRY2A2RUG3 117 aa8.24□□□□□ -1.09
HPS4-218ENST00000519774 SNAI2O43623 268 aa8.24□□□□□ -1.09
HPS4-218ENST00000519774 OR5AL1P0C617 328 aa8.24□□□□□ -1.09
HPS4-218ENST00000519774 GYPEP15421 78 aa8.24□□□□□ -1.09
HPS4-218ENST00000519774 PIK3CD-AS1Q5SR53 167 aa8.24□□□□□ -1.09
HPS4-218ENST00000519774 FAM74A4Q5TZK3 123 aa8.24□□□□□ -1.09
HPS4-218ENST00000519774 SPANXN1Q5VSR9 72 aa8.24□□□□□ -1.09
HPS4-218ENST00000519774 FER1L6-AS1Q8NA97 138 aa8.24□□□□□ -1.09
HPS4-218ENST00000519774 RPP21Q9H633 154 aaKnown RBP8.24□□□□□ -1.09
HPS4-218ENST00000519774 LY96Q9Y6Y9 160 aa8.24□□□□□ -1.09
HPS4-218ENST00000519774 KMT2CQ8NEZ4 4911 aaKnown RBP8.24□□□□□ -1.09
HPS4-218ENST00000519774 A0A087WWL8 130 aa8.23□□□□□ -1.09
HPS4-218ENST00000519774 LOC100131303A0A0U1RQF7 123 aa8.23□□□□□ -1.09
HPS4-218ENST00000519774 GATCO43716 136 aaKnown RBP8.23□□□□□ -1.09
HPS4-218ENST00000519774 CLLU1Q5K131 121 aa8.23□□□□□ -1.09
HPS4-218ENST00000519774 LINC01551Q86U37 167 aa8.23□□□□□ -1.09
HPS4-218ENST00000519774 SAMD10Q9BYL1 202 aa8.23□□□□□ -1.09
HPS4-218ENST00000519774 RHODO00212 210 aa8.22□□□□□ -1.09
HPS4-218ENST00000519774 CIDEAO60543 219 aa8.22□□□□□ -1.09
HPS4-218ENST00000519774 NXPH4O95158 308 aa8.22□□□□□ -1.09
HPS4-218ENST00000519774 IGLC6P0CF74 106 aa8.22□□□□□ -1.09
HPS4-218ENST00000519774 CCL18P55774 89 aa8.22□□□□□ -1.09
HPS4-218ENST00000519774 ERVFC1-1P60608 527 aa8.22□□□□□ -1.09
HPS4-218ENST00000519774 MRPL23Q16540 153 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms