RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 ANK1P16157 1881 aa0.81□□□□□ -2.28
RNU6-840P-201ENST00000517275 EML5Q05BV3 1969 aa0.81□□□□□ -2.28
RNU6-840P-201ENST00000517275 CDK5RAP2Q96SN8 1893 aa0.8□□□□□ -2.28
RNU6-840P-201ENST00000517275 FCGBPQ9Y6R7 5405 aaPredicted RBP0.8□□□□□ -2.28
RNU6-840P-201ENST00000517275 LOC101927531A0A1B0GV80 90 aa0.8□□□□□ -2.28
RNU6-840P-201ENST00000517275 ZNF670-ZNF695F2Z2N8 137 aa0.8□□□□□ -2.28
RNU6-840P-201ENST00000517275 IL7P13232 177 aa0.8□□□□□ -2.28
RNU6-840P-201ENST00000517275 COPZ1P61923 177 aa0.8□□□□□ -2.28
RNU6-840P-201ENST00000517275 UNQ5815/PRO19632Q6UWF5 114 aa0.8□□□□□ -2.28
RNU6-840P-201ENST00000517275 TSTD1Q8NFU3 115 aa0.8□□□□□ -2.28
RNU6-840P-201ENST00000517275 VSTM2AQ8TAG5 236 aa0.8□□□□□ -2.28
RNU6-840P-201ENST00000517275 PLAC4Q8WY50 150 aa0.8□□□□□ -2.28
RNU6-840P-201ENST00000517275 LINC00208Q96KT6 92 aa0.8□□□□□ -2.28
RNU6-840P-201ENST00000517275 TMEM191AQ9H0A3 160 aa0.8□□□□□ -2.28
RNU6-840P-201ENST00000517275 ASH1LQ9NR48 2969 aaKnown RBP0.8□□□□□ -2.28
RNU6-840P-201ENST00000517275 TEX49A0A1B0GTD5 131 aa0.79□□□□□ -2.28
RNU6-840P-201ENST00000517275 EFCAB10A6NFE3 127 aa0.79□□□□□ -2.28
RNU6-840P-201ENST00000517275 K7ERU9 68 aa0.79□□□□□ -2.28
RNU6-840P-201ENST00000517275 PYYP10082 97 aa0.79□□□□□ -2.28
RNU6-840P-201ENST00000517275 SLC25A6P12236 298 aa0.79□□□□□ -2.28
RNU6-840P-201ENST00000517275 GUCA1AP43080 201 aaPredicted RBP0.79□□□□□ -2.28
RNU6-840P-201ENST00000517275 LINC01545Q5VT33 79 aa0.79□□□□□ -2.28
RNU6-840P-201ENST00000517275 OR2T2Q6IF00 324 aa0.79□□□□□ -2.28
RNU6-840P-201ENST00000517275 ERCC6Q03468 1493 aa0.79□□□□□ -2.28
RNU6-840P-201ENST00000517275 SPTBP11277 2137 aa0.78□□□□□ -2.28
RNU6-840P-201ENST00000517275 KLKP1Q107X0 134 aa0.78□□□□□ -2.28
RNU6-840P-201ENST00000517275 C1orf54Q8WWF1 131 aa0.78□□□□□ -2.28
RNU6-840P-201ENST00000517275 TMEM2Q9UHN6 1383 aa0.78□□□□□ -2.28
RNU6-840P-201ENST00000517275 ZCCHC6Q5VYS8 1495 aaKnown RBP0.78□□□□□ -2.28
RNU6-840P-201ENST00000517275 LRP5O75197 1615 aa0.78□□□□□ -2.29
RNU6-840P-201ENST00000517275 A0A096LNT2 108 aa0.77□□□□□ -2.29
RNU6-840P-201ENST00000517275 RRAS2P62070 204 aaPredicted RBP0.77□□□□□ -2.29
RNU6-840P-201ENST00000517275 SPCS2Q15005 226 aa0.77□□□□□ -2.29
RNU6-840P-201ENST00000517275 ZNF56Q15929 161 aa0.77□□□□□ -2.29
RNU6-840P-201ENST00000517275 SPINK13Q1W4C9 94 aa0.77□□□□□ -2.29
RNU6-840P-201ENST00000517275 SPINK9Q5DT21 86 aa0.77□□□□□ -2.29
RNU6-840P-201ENST00000517275 MIC13Q5XKP0 118 aa0.77□□□□□ -2.29
RNU6-840P-201ENST00000517275 Q6ZUT4 128 aa0.77□□□□□ -2.29
RNU6-840P-201ENST00000517275 DPH3Q96FX2 82 aa0.77□□□□□ -2.29
RNU6-840P-201ENST00000517275 CCDC167Q9P0B6 97 aa0.77□□□□□ -2.29
RNU6-840P-201ENST00000517275 BLMP54132 1417 aaPredicted RBP0.77□□□□□ -2.29
RNU6-840P-201ENST00000517275 BICRAQ9NZM4 1560 aa0.76□□□□□ -2.29
RNU6-840P-201ENST00000517275 APOC1P02654 83 aa0.76□□□□□ -2.29
RNU6-840P-201ENST00000517275 LINC00470Q9BZP3 86 aa0.76□□□□□ -2.29
RNU6-840P-201ENST00000517275 NDUFA12Q9UI09 145 aa0.76□□□□□ -2.29
RNU6-840P-201ENST00000517275 TRPM7Q96QT4 1865 aa0.75□□□□□ -2.29
RNU6-840P-201ENST00000517275 CASZ1Q86V15 1759 aa0.75□□□□□ -2.29
RNU6-840P-201ENST00000517275 PTPRMP28827 1452 aa0.75□□□□□ -2.29
RNU6-840P-201ENST00000517275 TRAV12-2A0A075B6T6 113 aa0.75□□□□□ -2.29
RNU6-840P-201ENST00000517275 TRAV17A0A0B4J275 112 aa0.75□□□□□ -2.29
RNU6-840P-201ENST00000517275 PRB3Q04118 309 aaPredicted RBP0.75□□□□□ -2.29
RNU6-840P-201ENST00000517275 EMX2Q04743 252 aa0.75□□□□□ -2.29
RNU6-840P-201ENST00000517275 IQCJQ1A5X6 159 aa0.75□□□□□ -2.29
RNU6-840P-201ENST00000517275 SPANXN1Q5VSR9 72 aa0.75□□□□□ -2.29
RNU6-840P-201ENST00000517275 PPP1R1CQ8WVI7 109 aa0.75□□□□□ -2.29
RNU6-840P-201ENST00000517275 TSC22D3Q99576 134 aa0.75□□□□□ -2.29
RNU6-840P-201ENST00000517275 KRTAP4-1Q9BYQ7 146 aa0.75□□□□□ -2.29
RNU6-840P-201ENST00000517275 ABCA4P78363 2273 aa0.75□□□□□ -2.29
RNU6-840P-201ENST00000517275 GRIN2AQ12879 1464 aa0.74□□□□□ -2.29
RNU6-840P-201ENST00000517275 FXYD6P3P58550 94 aa0.74□□□□□ -2.29
RNU6-840P-201ENST00000517275 Q86TA4 180 aa0.74□□□□□ -2.29
RNU6-840P-201ENST00000517275 TSKUQ8WUA8 353 aa0.74□□□□□ -2.29
RNU6-840P-201ENST00000517275 TMEM141Q96I45 108 aa0.74□□□□□ -2.29
RNU6-840P-201ENST00000517275 CDK12Q9NYV4 1490 aaPredicted RBP0.73□□□□□ -2.29
RNU6-840P-201ENST00000517275 PLXNA2O75051 1894 aa0.73□□□□□ -2.29
RNU6-840P-201ENST00000517275 ZDBF2Q9HCK1 2354 aa0.73□□□□□ -2.29
RNU6-840P-201ENST00000517275 A0A0D9SG42 100 aa0.73□□□□□ -2.29
RNU6-840P-201ENST00000517275 PIRTP0C851 137 aa0.73□□□□□ -2.29
RNU6-840P-201ENST00000517275 RPL37P61927 97 aaKnown RBP0.73□□□□□ -2.29
RNU6-840P-201ENST00000517275 BTG2P78543 158 aa0.73□□□□□ -2.29
RNU6-840P-201ENST00000517275 C9orf116Q5BN46 136 aaPredicted RBP0.73□□□□□ -2.29
RNU6-840P-201ENST00000517275 KCNRGQ8N5I3 272 aa0.73□□□□□ -2.29
RNU6-840P-201ENST00000517275 ARL11Q969Q4 196 aa0.73□□□□□ -2.29
RNU6-840P-201ENST00000517275 IFI27L1Q96BM0 104 aa0.73□□□□□ -2.29
RNU6-840P-201ENST00000517275 PSMG3Q9BT73 122 aaPredicted RBP0.73□□□□□ -2.29
RNU6-840P-201ENST00000517275 SNRNP25Q9BV90 132 aaKnown RBP0.73□□□□□ -2.29
RNU6-840P-201ENST00000517275 FAM107BQ9H098 131 aa0.73□□□□□ -2.29
RNU6-840P-201ENST00000517275 TMEM14BQ9NUH8 114 aa0.73□□□□□ -2.29
RNU6-840P-201ENST00000517275 BET1LQ9NYM9 111 aa0.73□□□□□ -2.29
RNU6-840P-201ENST00000517275 VIRMAQ69YN4 1812 aaKnown RBP0.73□□□□□ -2.29
RNU6-840P-201ENST00000517275 DLEC1Q9Y238 1755 aa0.73□□□□□ -2.29
RNU6-840P-201ENST00000517275 ATG2AQ2TAZ0 1938 aa0.72□□□□□ -2.29
RNU6-840P-201ENST00000517275 MYH13Q9UKX3 1938 aa0.72□□□□□ -2.29
RNU6-840P-201ENST00000517275 M0R129 80 aa0.72□□□□□ -2.29
RNU6-840P-201ENST00000517275 KIAA0100Q14667 2235 aaKnown RBP0.72□□□□□ -2.29
RNU6-840P-201ENST00000517275 KNTC1P50748 2209 aa0.71□□□□□ -2.3
RNU6-840P-201ENST00000517275 MCRIP1C9JLW8 97 aa0.71□□□□□ -2.3
RNU6-840P-201ENST00000517275 NDUFB6O95139 128 aa0.71□□□□□ -2.3
RNU6-840P-201ENST00000517275 ELOF1P60002 83 aaKnown RBP0.71□□□□□ -2.3
RNU6-840P-201ENST00000517275 SLC48A1Q6P1K1 146 aa0.71□□□□□ -2.3
RNU6-840P-201ENST00000517275 C10orf95Q9H7T3 257 aa0.71□□□□□ -2.3
RNU6-840P-201ENST00000517275 TMEM242Q9NWH2 141 aa0.71□□□□□ -2.3
RNU6-840P-201ENST00000517275 COA4Q9NYJ1 87 aa0.71□□□□□ -2.3
RNU6-840P-201ENST00000517275 AKAP11Q9UKA4 1901 aa0.71□□□□□ -2.3
RNU6-840P-201ENST00000517275 FBN2P35556 2912 aa0.71□□□□□ -2.3
RNU6-840P-201ENST00000517275 FAM92AA1XBS5 289 aa0.7□□□□□ -2.3
RNU6-840P-201ENST00000517275 CCL3L1P16619 93 aa0.7□□□□□ -2.3
RNU6-840P-201ENST00000517275 NPC2P61916 151 aa0.7□□□□□ -2.3
RNU6-840P-201ENST00000517275 SSBP1Q04837 148 aaKnown RBP0.7□□□□□ -2.3
RNU6-840P-201ENST00000517275 AGPAT4-IT1Q9H0P7 198 aa0.7□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms