RNA–Protein interactions for RNA: ENST00000516254.1

RNU6-1041P-201, Transcript of RNA, U6 small nuclear 1041, pseudogene, humanhuman

BASIC

Gene RNU6-1041P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1041P-201ENST00000516254 PRR15LQ9BU68 103 aa0.16□□□□□ -2.38
RNU6-1041P-201ENST00000516254 BANF2Q9H503 90 aa0.16□□□□□ -2.38
RNU6-1041P-201ENST00000516254 HIGD1AQ9Y241 93 aa0.16□□□□□ -2.38
RNU6-1041P-201ENST00000516254 DNAJC15Q9Y5T4 150 aa0.16□□□□□ -2.38
RNU6-1041P-201ENST00000516254 LOC285556D6RIA3 1793 aa0.16□□□□□ -2.38
RNU6-1041P-201ENST00000516254 CPDO75976 1380 aa0.16□□□□□ -2.38
RNU6-1041P-201ENST00000516254 KDM6BO15054 1643 aa0.16□□□□□ -2.38
RNU6-1041P-201ENST00000516254 USP24Q9UPU5 2620 aa0.16□□□□□ -2.38
RNU6-1041P-201ENST00000516254 KDM5CP41229 1560 aa0.15□□□□□ -2.38
RNU6-1041P-201ENST00000516254 RREB1Q92766 1687 aa0.15□□□□□ -2.39
RNU6-1041P-201ENST00000516254 DLEC1Q9Y238 1755 aa0.15□□□□□ -2.39
RNU6-1041P-201ENST00000516254 CDK13Q14004 1512 aaKnown RBP0.15□□□□□ -2.39
RNU6-1041P-201ENST00000516254 RBAKDNA6NC62 111 aa0.15□□□□□ -2.39
RNU6-1041P-201ENST00000516254 F2Z2F3 143 aa0.15□□□□□ -2.39
RNU6-1041P-201ENST00000516254 ZNF670-ZNF695F2Z2N8 137 aa0.15□□□□□ -2.39
RNU6-1041P-201ENST00000516254 J3QLW9 94 aa0.15□□□□□ -2.39
RNU6-1041P-201ENST00000516254 TMEM244Q5VVB8 128 aa0.15□□□□□ -2.39
RNU6-1041P-201ENST00000516254 ATP11AUNQ6ZP68 121 aa0.15□□□□□ -2.39
RNU6-1041P-201ENST00000516254 VMO1Q7Z5L0 202 aa0.15□□□□□ -2.39
RNU6-1041P-201ENST00000516254 SNX29P2Q8IUI4 249 aa0.15□□□□□ -2.39
RNU6-1041P-201ENST00000516254 MMGT1Q8N4V1 131 aa0.15□□□□□ -2.39
RNU6-1041P-201ENST00000516254 NOP16Q9Y3C1 178 aaKnown RBP0.15□□□□□ -2.39
RNU6-1041P-201ENST00000516254 LRP5O75197 1615 aa0.15□□□□□ -2.39
RNU6-1041P-201ENST00000516254 ATG2AQ2TAZ0 1938 aa0.15□□□□□ -2.39
RNU6-1041P-201ENST00000516254 TCRBV3S1A0A5B6 114 aa0.14□□□□□ -2.39
RNU6-1041P-201ENST00000516254 M0R2P5 195 aa0.14□□□□□ -2.39
RNU6-1041P-201ENST00000516254 MT-ND4LP03901 98 aa0.14□□□□□ -2.39
RNU6-1041P-201ENST00000516254 NCS1P62166 190 aa0.14□□□□□ -2.39
RNU6-1041P-201ENST00000516254 CYP2G1PQ6ZSU1 146 aa0.14□□□□□ -2.39
RNU6-1041P-201ENST00000516254 BPESC1Q9GZL8 116 aa0.14□□□□□ -2.39
RNU6-1041P-201ENST00000516254 PROK2Q9HC23 129 aa0.14□□□□□ -2.39
RNU6-1041P-201ENST00000516254 MRPL40Q9NQ50 206 aaKnown RBP0.14□□□□□ -2.39
RNU6-1041P-201ENST00000516254 SAR1AQ9NR31 198 aa0.14□□□□□ -2.39
RNU6-1041P-201ENST00000516254 SPTBP11277 2137 aa0.14□□□□□ -2.39
RNU6-1041P-201ENST00000516254 LAMC3Q9Y6N6 1575 aa0.14□□□□□ -2.39
RNU6-1041P-201ENST00000516254 KNTC1P50748 2209 aa0.14□□□□□ -2.39
RNU6-1041P-201ENST00000516254 OVOS2A0A0J9YW53 1432 aa0.13□□□□□ -2.39
RNU6-1041P-201ENST00000516254 OVOS2Q6IE36 1432 aa0.13□□□□□ -2.39
RNU6-1041P-201ENST00000516254 SPAG17Q6Q759 2223 aa0.13□□□□□ -2.39
RNU6-1041P-201ENST00000516254 CACNA1EQ15878 2313 aa0.13□□□□□ -2.39
RNU6-1041P-201ENST00000516254 TRBV20-1A0A075B6N2 111 aa0.13□□□□□ -2.39
RNU6-1041P-201ENST00000516254 EMX2Q04743 252 aa0.13□□□□□ -2.39
RNU6-1041P-201ENST00000516254 SSBP1Q04837 148 aaKnown RBP0.13□□□□□ -2.39
RNU6-1041P-201ENST00000516254 OR2T2Q6IF00 324 aa0.13□□□□□ -2.39
RNU6-1041P-201ENST00000516254 AKAP14Q86UN6 197 aa0.13□□□□□ -2.39
RNU6-1041P-201ENST00000516254 ANKRD30AQ9BXX3 1397 aa0.13□□□□□ -2.39
RNU6-1041P-201ENST00000516254 UNC13BO14795 1591 aa0.13□□□□□ -2.39
RNU6-1041P-201ENST00000516254 TANC2Q9HCD6 1990 aa0.12□□□□□ -2.39
RNU6-1041P-201ENST00000516254 RBBP6Q7Z6E9 1792 aaKnown RBP0.12□□□□□ -2.39
RNU6-1041P-201ENST00000516254 ZNF142P52746 1687 aaPredicted RBP0.12□□□□□ -2.39
RNU6-1041P-201ENST00000516254 NCR2O95944 276 aa0.12□□□□□ -2.39
RNU6-1041P-201ENST00000516254 SLC25A6P12236 298 aa0.12□□□□□ -2.39
RNU6-1041P-201ENST00000516254 COX4I1P13073 169 aa0.12□□□□□ -2.39
RNU6-1041P-201ENST00000516254 CLLU1Q5K131 121 aa0.12□□□□□ -2.39
RNU6-1041P-201ENST00000516254 FAM74A4Q5TZK3 123 aa0.12□□□□□ -2.39
RNU6-1041P-201ENST00000516254 GSKIPQ9P0R6 139 aa0.12□□□□□ -2.39
RNU6-1041P-201ENST00000516254 SCP2D1Q9UJQ7 156 aa0.12□□□□□ -2.39
RNU6-1041P-201ENST00000516254 AFDNP55196 1824 aaKnown RBP0.12□□□□□ -2.39
RNU6-1041P-201ENST00000516254 NAV2Q8IVL1 2488 aa0.12□□□□□ -2.39
RNU6-1041P-201ENST00000516254 BDP1A6H8Y1 2624 aa0.12□□□□□ -2.39
RNU6-1041P-201ENST00000516254 DISP2A7MBM2 1401 aa0.12□□□□□ -2.39
RNU6-1041P-201ENST00000516254 SOGA1O94964 1423 aa0.12□□□□□ -2.39
RNU6-1041P-201ENST00000516254 TRPM7Q96QT4 1865 aa0.12□□□□□ -2.39
RNU6-1041P-201ENST00000516254 TNCP24821 2201 aa0.11□□□□□ -2.39
RNU6-1041P-201ENST00000516254 MEGF8Q7Z7M0 2845 aa0.11□□□□□ -2.39
RNU6-1041P-201ENST00000516254 MYH1P12882 1939 aa0.11□□□□□ -2.39
RNU6-1041P-201ENST00000516254 APODP05090 189 aa0.11□□□□□ -2.39
RNU6-1041P-201ENST00000516254 CCL3L1P16619 93 aa0.11□□□□□ -2.39
RNU6-1041P-201ENST00000516254 ELOF1P60002 83 aaKnown RBP0.11□□□□□ -2.39
RNU6-1041P-201ENST00000516254 SLC48A1Q6P1K1 146 aa0.11□□□□□ -2.39
RNU6-1041P-201ENST00000516254 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.11□□□□□ -2.39
RNU6-1041P-201ENST00000516254 SMIM11BQ8TCY0 68 aa0.11□□□□□ -2.39
RNU6-1041P-201ENST00000516254 TMEM242Q9NWH2 141 aa0.11□□□□□ -2.39
RNU6-1041P-201ENST00000516254 MAP2P11137 1827 aaKnown RBP0.1□□□□□ -2.39
RNU6-1041P-201ENST00000516254 PTPRMP28827 1452 aa0.1□□□□□ -2.39
RNU6-1041P-201ENST00000516254 FAT4Q6V0I7 4981 aa0.1□□□□□ -2.39
RNU6-1041P-201ENST00000516254 SYNE1Q8NF91 8797 aaKnown RBP0.1□□□□□ -2.39
RNU6-1041P-201ENST00000516254 J3QR89 54 aa0.1□□□□□ -2.39
RNU6-1041P-201ENST00000516254 SPINK1P00995 79 aa0.1□□□□□ -2.39
RNU6-1041P-201ENST00000516254 TSPAN19P0C672 248 aa0.1□□□□□ -2.39
RNU6-1041P-201ENST00000516254 COX6A2Q02221 97 aa0.1□□□□□ -2.39
RNU6-1041P-201ENST00000516254 Q5BKY6 102 aa0.1□□□□□ -2.39
RNU6-1041P-201ENST00000516254 SPANXN1Q5VSR9 72 aa0.1□□□□□ -2.39
RNU6-1041P-201ENST00000516254 VSTM2AQ8TAG5 236 aa0.1□□□□□ -2.39
RNU6-1041P-201ENST00000516254 IFI27L1Q96BM0 104 aa0.1□□□□□ -2.39
RNU6-1041P-201ENST00000516254 LSM2Q9Y333 95 aaKnown RBP0.1□□□□□ -2.39
RNU6-1041P-201ENST00000516254 MACF1Q9UPN3 7388 aaKnown RBP0.1□□□□□ -2.39
RNU6-1041P-201ENST00000516254 XIRP1Q702N8 1843 aaKnown RBP0.1□□□□□ -2.39
RNU6-1041P-201ENST00000516254 TANC1Q9C0D5 1861 aa0.1□□□□□ -2.39
RNU6-1041P-201ENST00000516254 ESPL1Q14674 2120 aa0.09□□□□□ -2.4
RNU6-1041P-201ENST00000516254 SPCS2Q15005 226 aa0.09□□□□□ -2.4
RNU6-1041P-201ENST00000516254 CTAGE3PQ8IX95 158 aa0.09□□□□□ -2.4
RNU6-1041P-201ENST00000516254 C4orf33Q8N1A6 199 aa0.09□□□□□ -2.4
RNU6-1041P-201ENST00000516254 COX7B2Q8TF08 81 aa0.09□□□□□ -2.4
RNU6-1041P-201ENST00000516254 LZICQ8WZA0 190 aa0.09□□□□□ -2.4
RNU6-1041P-201ENST00000516254 BATF3Q9NR55 127 aa0.09□□□□□ -2.4
RNU6-1041P-201ENST00000516254 V9GYV3 84 aa0.09□□□□□ -2.4
RNU6-1041P-201ENST00000516254 DAPK1P53355 1430 aa0.09□□□□□ -2.4
RNU6-1041P-201ENST00000516254 ERCC6Q03468 1493 aa0.09□□□□□ -2.4
RNU6-1041P-201ENST00000516254 HELZP42694 1942 aaKnown RBP0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms