RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 MBD2Q9UBB5 411 aa13.13□□□□□ -0.31
SQSTM1-215ENST00000514093 TNXBP22105 4242 aa13.13□□□□□ -0.31
SQSTM1-215ENST00000514093 CCDC160A6NGH7 325 aa13.12□□□□□ -0.31
SQSTM1-215ENST00000514093 A0A087WWC5 75 aa13.11□□□□□ -0.31
SQSTM1-215ENST00000514093 KHDC3LQ587J8 217 aa13.11□□□□□ -0.31
SQSTM1-215ENST00000514093 PARLQ9H300 379 aa13.11□□□□□ -0.31
SQSTM1-215ENST00000514093 KCNIP2Q9NS61 270 aa13.11□□□□□ -0.31
SQSTM1-215ENST00000514093 C17orf112F2Z3M2 114 aa13.1□□□□□ -0.31
SQSTM1-215ENST00000514093 PLA2G10O15496 165 aa13.1□□□□□ -0.31
SQSTM1-215ENST00000514093 TCRBP04435 133 aa13.1□□□□□ -0.31
SQSTM1-215ENST00000514093 IL7P13232 177 aa13.1□□□□□ -0.31
SQSTM1-215ENST00000514093 FFAR4Q5NUL3 377 aa13.1□□□□□ -0.31
SQSTM1-215ENST00000514093 FAM74A1Q5RGS3 127 aa13.1□□□□□ -0.31
SQSTM1-215ENST00000514093 C14orf178Q8N769 122 aaPredicted RBP13.1□□□□□ -0.31
SQSTM1-215ENST00000514093 RNASE3P12724 160 aaKnown RBP13.09□□□□□ -0.31
SQSTM1-215ENST00000514093 ASIPP42127 132 aa13.09□□□□□ -0.31
SQSTM1-215ENST00000514093 PTH2Q96A98 100 aa13.09□□□□□ -0.31
SQSTM1-215ENST00000514093 JPT2Q9H910 190 aa13.09□□□□□ -0.31
SQSTM1-215ENST00000514093 TAAR5O14804 337 aa13.08□□□□□ -0.32
SQSTM1-215ENST00000514093 GCGP01275 180 aa13.08□□□□□ -0.32
SQSTM1-215ENST00000514093 LGALSLQ3ZCW2 172 aaPredicted RBP13.08□□□□□ -0.32
SQSTM1-215ENST00000514093 NUDT15Q9NV35 164 aa13.08□□□□□ -0.32
SQSTM1-215ENST00000514093 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.08□□□□□ -0.32
SQSTM1-215ENST00000514093 PANO1I0J062 215 aa13.07□□□□□ -0.32
SQSTM1-215ENST00000514093 SEC11BP0C7V7 166 aa13.07□□□□□ -0.32
SQSTM1-215ENST00000514093 TAS2R45P59539 299 aa13.07□□□□□ -0.32
SQSTM1-215ENST00000514093 C14orf177Q52M58 125 aa13.07□□□□□ -0.32
SQSTM1-215ENST00000514093 ZFP2Q6ZN57 461 aa13.07□□□□□ -0.32
SQSTM1-215ENST00000514093 LINC00479Q96M42 142 aa13.07□□□□□ -0.32
SQSTM1-215ENST00000514093 OR5AC2Q9NZP5 309 aa13.07□□□□□ -0.32
SQSTM1-215ENST00000514093 A0A087WX48 190 aa13.06□□□□□ -0.32
SQSTM1-215ENST00000514093 LYRM1O43325 122 aa13.06□□□□□ -0.32
SQSTM1-215ENST00000514093 FGF8P55075 233 aaPredicted RBP13.06□□□□□ -0.32
SQSTM1-215ENST00000514093 ATRAIDQ6UW56 229 aa13.06□□□□□ -0.32
SQSTM1-215ENST00000514093 Q6ZRU5 148 aa13.06□□□□□ -0.32
SQSTM1-215ENST00000514093 NDFIP1Q9BT67 221 aa13.06□□□□□ -0.32
SQSTM1-215ENST00000514093 A8MWV9 139 aa13.05□□□□□ -0.32
SQSTM1-215ENST00000514093 SIX6O95475 246 aa13.04□□□□□ -0.32
SQSTM1-215ENST00000514093 ELOBQ15370 118 aa13.04□□□□□ -0.32
SQSTM1-215ENST00000514093 LRRC37A5PQ49AS3 106 aa13.04□□□□□ -0.32
SQSTM1-215ENST00000514093 UFSP1Q6NVU6 142 aa13.04□□□□□ -0.32
SQSTM1-215ENST00000514093 ARL6IP6Q8N6S5 226 aa13.04□□□□□ -0.32
SQSTM1-215ENST00000514093 C1orf43Q9BWL3 253 aa13.04□□□□□ -0.32
SQSTM1-215ENST00000514093 USP17L23D6RBM5 183 aa13.03□□□□□ -0.32
SQSTM1-215ENST00000514093 H0YIZ8 118 aa13.03□□□□□ -0.32
SQSTM1-215ENST00000514093 HMGB3O15347 200 aaKnown RBP13.03□□□□□ -0.32
SQSTM1-215ENST00000514093 H2AFB2P0C5Z0 115 aa13.03□□□□□ -0.32
SQSTM1-215ENST00000514093 DMRTA1Q5VZB9 504 aa13.03□□□□□ -0.32
SQSTM1-215ENST00000514093 ENHOQ6UWT2 76 aa13.03□□□□□ -0.32
SQSTM1-215ENST00000514093 PRSS1P07477 247 aa13.02□□□□□ -0.33
SQSTM1-215ENST00000514093 Q0VG73 95 aa13.02□□□□□ -0.33
SQSTM1-215ENST00000514093 ODF1Q14990 250 aa13.02□□□□□ -0.33
SQSTM1-215ENST00000514093 KCNIP4Q6PIL6 250 aa13.02□□□□□ -0.33
SQSTM1-215ENST00000514093 OR10G9Q8NGN4 311 aa13.02□□□□□ -0.33
SQSTM1-215ENST00000514093 PSG8Q9UQ74 426 aa13.02□□□□□ -0.33
SQSTM1-215ENST00000514093 S100A4P26447 101 aaKnown RBP13.01□□□□□ -0.33
SQSTM1-215ENST00000514093 OR2G3Q8NGZ4 309 aa13.01□□□□□ -0.33
SQSTM1-215ENST00000514093 IGKV3D-20A0A0C4DH25 116 aa13□□□□□ -0.33
SQSTM1-215ENST00000514093 TMEM262E9PQX1 116 aa13□□□□□ -0.33
SQSTM1-215ENST00000514093 HLA-DQA1P01909 254 aa13□□□□□ -0.33
SQSTM1-215ENST00000514093 SMUG1Q53HV7 270 aa13□□□□□ -0.33
SQSTM1-215ENST00000514093 C15orf54Q8N8G6 183 aa13□□□□□ -0.33
SQSTM1-215ENST00000514093 C9orf163Q8N9P6 203 aa13□□□□□ -0.33
SQSTM1-215ENST00000514093 CHCHD7Q9BUK0 85 aa13□□□□□ -0.33
SQSTM1-215ENST00000514093 SMIM3Q9BZL3 60 aa13□□□□□ -0.33
SQSTM1-215ENST00000514093 A0A0D9SG52 128 aa12.99□□□□□ -0.33
SQSTM1-215ENST00000514093 TCRAP04437 139 aa12.99□□□□□ -0.33
SQSTM1-215ENST00000514093 FAM74A4Q5TZK3 123 aa12.99□□□□□ -0.33
SQSTM1-215ENST00000514093 PQLC2Q6ZP29 291 aa12.99□□□□□ -0.33
SQSTM1-215ENST00000514093 PRNTQ86SH4 94 aa12.99□□□□□ -0.33
SQSTM1-215ENST00000514093 SCGB1C1Q8TD33 95 aa12.99□□□□□ -0.33
SQSTM1-215ENST00000514093 ZC2HC1AQ96GY0 325 aa12.99□□□□□ -0.33
SQSTM1-215ENST00000514093 CRPP02741 224 aa12.98□□□□□ -0.33
SQSTM1-215ENST00000514093 ZFP69Q49AA0 526 aa12.98□□□□□ -0.33
SQSTM1-215ENST00000514093 A0A1W2PPV4 95 aa12.97□□□□□ -0.33
SQSTM1-215ENST00000514093 RAB2AP61019 212 aa12.97□□□□□ -0.33
SQSTM1-215ENST00000514093 PIK3CD-AS1Q5SR53 167 aa12.97□□□□□ -0.33
SQSTM1-215ENST00000514093 DGAT2L7PQ6IED9 249 aa12.97□□□□□ -0.33
SQSTM1-215ENST00000514093 SDIM1Q6ZPB5 146 aa12.97□□□□□ -0.33
SQSTM1-215ENST00000514093 OR10G7Q8NGN6 311 aa12.97□□□□□ -0.33
SQSTM1-215ENST00000514093 RBM38Q9H0Z9 239 aaKnown RBP12.97□□□□□ -0.33
SQSTM1-215ENST00000514093 A0A087WWL8 130 aa12.96□□□□□ -0.33
SQSTM1-215ENST00000514093 SERTM2A0A1B0GWG4 89 aa12.96□□□□□ -0.33
SQSTM1-215ENST00000514093 FLI1Q01543 452 aaPredicted RBP12.96□□□□□ -0.33
SQSTM1-215ENST00000514093 H3BVH4 76 aa12.95□□□□□ -0.34
SQSTM1-215ENST00000514093 K7EQM0 130 aa12.95□□□□□ -0.34
SQSTM1-215ENST00000514093 C5orf17Q8NAS9 161 aa12.95□□□□□ -0.34
SQSTM1-215ENST00000514093 DPH3P1Q9H4G8 78 aa12.95□□□□□ -0.34
SQSTM1-215ENST00000514093 RHODO00212 210 aa12.94□□□□□ -0.34
SQSTM1-215ENST00000514093 ANGP03950 147 aaKnown RBP12.94□□□□□ -0.34
SQSTM1-215ENST00000514093 ARL14EPLP0DKL9 152 aa12.94□□□□□ -0.34
SQSTM1-215ENST00000514093 MPV17L2Q567V2 206 aa12.94□□□□□ -0.34
SQSTM1-215ENST00000514093 HSPB11Q9Y547 144 aa12.94□□□□□ -0.34
SQSTM1-215ENST00000514093 DPH3Q96FX2 82 aa12.93□□□□□ -0.34
SQSTM1-215ENST00000514093 IL36BQ9NZH7 164 aa12.93□□□□□ -0.34
SQSTM1-215ENST00000514093 FAM240BA0A1B0GVZ2 78 aa12.92□□□□□ -0.34
SQSTM1-215ENST00000514093 ARMS2P0C7Q2 107 aa12.92□□□□□ -0.34
SQSTM1-215ENST00000514093 UBE2D3P61077 147 aa12.92□□□□□ -0.34
SQSTM1-215ENST00000514093 UBE2D2P62837 147 aa12.92□□□□□ -0.34
SQSTM1-215ENST00000514093 SUMO1P63165 101 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms