RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 ERCC8Q13216 396 aa6.24□□□□□ -1.41
NEDD9-211ENST00000508546 PEA15Q15121 130 aa6.24□□□□□ -1.41
NEDD9-211ENST00000508546 C9orf47Q6ZRZ4 202 aa6.24□□□□□ -1.41
NEDD9-211ENST00000508546 SH2D6Q7Z4S9 175 aa6.24□□□□□ -1.41
NEDD9-211ENST00000508546 ZFAND2AQ8N6M9 145 aa6.24□□□□□ -1.41
NEDD9-211ENST00000508546 OR1L4Q8NGR5 311 aa6.24□□□□□ -1.41
NEDD9-211ENST00000508546 DNAJC4Q9NNZ3 241 aa6.24□□□□□ -1.41
NEDD9-211ENST00000508546 MANBALQ9NQG1 85 aa6.24□□□□□ -1.41
NEDD9-211ENST00000508546 GNG13Q9P2W3 67 aa6.24□□□□□ -1.41
NEDD9-211ENST00000508546 PRELID1Q9Y255 219 aa6.24□□□□□ -1.41
NEDD9-211ENST00000508546 TMEM218A2RU14 115 aa6.23□□□□□ -1.41
NEDD9-211ENST00000508546 RBFOX3A6NFN3 312 aa6.23□□□□□ -1.41
NEDD9-211ENST00000508546 C9JCJ5 164 aa6.23□□□□□ -1.41
NEDD9-211ENST00000508546 CXorf1O96002 111 aa6.23□□□□□ -1.41
NEDD9-211ENST00000508546 SFTA3P0C7M3 94 aa6.23□□□□□ -1.41
NEDD9-211ENST00000508546 STAG3L2P0CL84 134 aa6.23□□□□□ -1.41
NEDD9-211ENST00000508546 STAG3L3P0CL85 134 aa6.23□□□□□ -1.41
NEDD9-211ENST00000508546 ARL14EPLP0DKL9 152 aa6.23□□□□□ -1.41
NEDD9-211ENST00000508546 PPT1P50897 306 aa6.23□□□□□ -1.41
NEDD9-211ENST00000508546 TAS2R45P59539 299 aa6.23□□□□□ -1.41
NEDD9-211ENST00000508546 KHDC3LQ587J8 217 aa6.23□□□□□ -1.41
NEDD9-211ENST00000508546 ZNF506Q5JVG8 444 aa6.23□□□□□ -1.41
NEDD9-211ENST00000508546 RASL10AQ92737 203 aa6.23□□□□□ -1.41
NEDD9-211ENST00000508546 ZNF479Q96JC4 524 aa6.23□□□□□ -1.41
NEDD9-211ENST00000508546 SMDT1Q9H4I9 107 aa6.23□□□□□ -1.41
NEDD9-211ENST00000508546 TRBV19A0A075B6N1 114 aa6.22□□□□□ -1.41
NEDD9-211ENST00000508546 ADCYAP1P18509 176 aa6.22□□□□□ -1.41
NEDD9-211ENST00000508546 GCHFRP30047 84 aa6.22□□□□□ -1.41
NEDD9-211ENST00000508546 TAGLN2P37802 199 aaKnown RBP6.22□□□□□ -1.41
NEDD9-211ENST00000508546 PDE6HQ13956 83 aa6.22□□□□□ -1.41
NEDD9-211ENST00000508546 TDRG1Q3Y452 100 aa6.22□□□□□ -1.41
NEDD9-211ENST00000508546 PRR9Q5T870 116 aa6.22□□□□□ -1.41
NEDD9-211ENST00000508546 MIR17HGQ75NE6 70 aa6.22□□□□□ -1.41
NEDD9-211ENST00000508546 BLNKQ8WV28 456 aa6.22□□□□□ -1.41
NEDD9-211ENST00000508546 Q9HAA7 133 aa6.22□□□□□ -1.41
NEDD9-211ENST00000508546 TRBV7-9A0A0J9YWB2 115 aa6.21□□□□□ -1.42
NEDD9-211ENST00000508546 C9JQL5 133 aa6.21□□□□□ -1.42
NEDD9-211ENST00000508546 F8W036 122 aa6.21□□□□□ -1.42
NEDD9-211ENST00000508546 OR7C2O60412 319 aa6.21□□□□□ -1.42
NEDD9-211ENST00000508546 NDUFB4O95168 129 aa6.21□□□□□ -1.42
NEDD9-211ENST00000508546 MEF2BQ02080 365 aaPredicted RBP6.21□□□□□ -1.42
NEDD9-211ENST00000508546 WFDC2Q14508 124 aa6.21□□□□□ -1.42
NEDD9-211ENST00000508546 LAGE3Q14657 143 aa6.21□□□□□ -1.42
NEDD9-211ENST00000508546 TMEM78Q5T7P6 136 aa6.21□□□□□ -1.42
NEDD9-211ENST00000508546 PQLC2Q6ZP29 291 aa6.21□□□□□ -1.42
NEDD9-211ENST00000508546 Q6ZQT7 251 aa6.21□□□□□ -1.42
NEDD9-211ENST00000508546 SCXQ7RTU7 201 aa6.21□□□□□ -1.42
NEDD9-211ENST00000508546 SPXQ9BT56 116 aa6.21□□□□□ -1.42
NEDD9-211ENST00000508546 TM2D2Q9BX73 214 aa6.21□□□□□ -1.42
NEDD9-211ENST00000508546 SEC11CQ9BY50 192 aa6.21□□□□□ -1.42
NEDD9-211ENST00000508546 TMEM14CQ9P0S9 112 aa6.21□□□□□ -1.42
NEDD9-211ENST00000508546 ZNF492Q9P255 531 aa6.21□□□□□ -1.42
NEDD9-211ENST00000508546 VAX2Q9UIW0 290 aa6.21□□□□□ -1.42
NEDD9-211ENST00000508546 CARHSP1Q9Y2V2 147 aaKnown RBP6.21□□□□□ -1.42
NEDD9-211ENST00000508546 TRAV8-6A0A0B4J262 113 aa6.2□□□□□ -1.42
NEDD9-211ENST00000508546 TRAV4A0A0B4J268 109 aa6.2□□□□□ -1.42
NEDD9-211ENST00000508546 APOC3P02656 99 aa6.2□□□□□ -1.42
NEDD9-211ENST00000508546 HIST1H1EP10412 219 aaKnown RBP6.2□□□□□ -1.42
NEDD9-211ENST00000508546 UBE2G2P60604 165 aa6.2□□□□□ -1.42
NEDD9-211ENST00000508546 UBE2L3P68036 154 aaKnown RBP6.2□□□□□ -1.42
NEDD9-211ENST00000508546 SLC25A2Q9BXI2 301 aa6.2□□□□□ -1.42
NEDD9-211ENST00000508546 TMEM167BQ9NRX6 74 aa6.2□□□□□ -1.42
NEDD9-211ENST00000508546 ARL2-SNX15V9GYD0 113 aa6.2□□□□□ -1.42
NEDD9-211ENST00000508546 FAT4Q6V0I7 4981 aa6.2□□□□□ -1.42
NEDD9-211ENST00000508546 IGKV2-40A0A087WW87 121 aaPredicted RBP6.19□□□□□ -1.42
NEDD9-211ENST00000508546 LOC100131303A0A0U1RQF7 123 aa6.19□□□□□ -1.42
NEDD9-211ENST00000508546 PAGE4O60829 102 aa6.19□□□□□ -1.42
NEDD9-211ENST00000508546 NDUFS6O75380 124 aaKnown RBP6.19□□□□□ -1.42
NEDD9-211ENST00000508546 IGKV2D-40P01614 121 aaPredicted RBP6.19□□□□□ -1.42
NEDD9-211ENST00000508546 SRP19P09132 144 aaKnown RBP6.19□□□□□ -1.42
NEDD9-211ENST00000508546 CEBPGP53567 150 aa6.19□□□□□ -1.42
NEDD9-211ENST00000508546 C10orf91Q5T1B1 145 aa6.19□□□□□ -1.42
NEDD9-211ENST00000508546 EXOC3-AS1Q8N2X6 119 aa6.19□□□□□ -1.42
NEDD9-211ENST00000508546 SVBPQ8N300 66 aa6.19□□□□□ -1.42
NEDD9-211ENST00000508546 CYB561D1Q8N8Q1 229 aa6.19□□□□□ -1.42
NEDD9-211ENST00000508546 NHLRC2Q8NBF2 726 aa6.19□□□□□ -1.42
NEDD9-211ENST00000508546 FAM167A-AS1Q96KT0 104 aa6.19□□□□□ -1.42
NEDD9-211ENST00000508546 CHAC1Q9BUX1 264 aa6.19□□□□□ -1.42
NEDD9-211ENST00000508546 AAMDCQ9H7C9 122 aa6.19□□□□□ -1.42
NEDD9-211ENST00000508546 TMEM250H0YL14 139 aa6.18□□□□□ -1.42
NEDD9-211ENST00000508546 PDE6DO43924 150 aa6.18□□□□□ -1.42
NEDD9-211ENST00000508546 PFN1P07737 140 aaKnown RBP6.18□□□□□ -1.42
NEDD9-211ENST00000508546 OR10J4P0C629 311 aa6.18□□□□□ -1.42
NEDD9-211ENST00000508546 ZNF138P52744 262 aa6.18□□□□□ -1.42
NEDD9-211ENST00000508546 OR10J3Q5JRS4 329 aa6.18□□□□□ -1.42
NEDD9-211ENST00000508546 MUC21Q5SSG8 566 aa6.18□□□□□ -1.42
NEDD9-211ENST00000508546 CST9LP1Q5W188 147 aa6.18□□□□□ -1.42
NEDD9-211ENST00000508546 OR4C5Q8NGB2 326 aa6.18□□□□□ -1.42
NEDD9-211ENST00000508546 PAXXQ9BUH6 204 aa6.18□□□□□ -1.42
NEDD9-211ENST00000508546 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.17□□□□□ -1.42
NEDD9-211ENST00000508546 TRGV11A0A075B6L2 103 aa6.17□□□□□ -1.42
NEDD9-211ENST00000508546 FAM74A7A6NL05 159 aa6.17□□□□□ -1.42
NEDD9-211ENST00000508546 F6UZH7 168 aa6.17□□□□□ -1.42
NEDD9-211ENST00000508546 RS1O15537 224 aa6.17□□□□□ -1.42
NEDD9-211ENST00000508546 SNAPINO95295 136 aa6.17□□□□□ -1.42
NEDD9-211ENST00000508546 IGLV2-8P01709 118 aa6.17□□□□□ -1.42
NEDD9-211ENST00000508546 IGHV3-30P01768 117 aa6.17□□□□□ -1.42
NEDD9-211ENST00000508546 IGHV3-33P01772 117 aa6.17□□□□□ -1.42
NEDD9-211ENST00000508546 IGHV3-30-3P0DP02 117 aa6.17□□□□□ -1.42
NEDD9-211ENST00000508546 IGHV3-30-5P0DP03 117 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms