RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 HELZ2Q9BYK8 2649 aaKnown RBP13.14□□□□□ -0.31
SFXN1-208ENST00000507823 AMTNQ6UX39 209 aa13.13□□□□□ -0.31
SFXN1-208ENST00000507823 DPH3P1Q9H4G8 78 aa13.13□□□□□ -0.31
SFXN1-208ENST00000507823 FCER1GP30273 86 aa13.13□□□□□ -0.31
SFXN1-208ENST00000507823 CCDC168Q8NDH2 2452 aa13.13□□□□□ -0.31
SFXN1-208ENST00000507823 TSPOP30536 169 aa13.12□□□□□ -0.31
SFXN1-208ENST00000507823 FAM159AQ6UWV7 190 aa13.12□□□□□ -0.31
SFXN1-208ENST00000507823 DPF1Q92782 380 aa13.12□□□□□ -0.31
SFXN1-208ENST00000507823 MYO9AB2RTY4 2548 aa13.12□□□□□ -0.31
SFXN1-208ENST00000507823 M0R381 172 aa13.12□□□□□ -0.31
SFXN1-208ENST00000507823 LGALS9BQ3B8N2 356 aa13.12□□□□□ -0.31
SFXN1-208ENST00000507823 LGALS9CQ6DKI2 356 aa13.12□□□□□ -0.31
SFXN1-208ENST00000507823 CDKN1BP46527 198 aa13.11□□□□□ -0.31
SFXN1-208ENST00000507823 C16orf95Q9H693 158 aa13.11□□□□□ -0.31
SFXN1-208ENST00000507823 RNASE1P07998 156 aaKnown RBP13.11□□□□□ -0.31
SFXN1-208ENST00000507823 TMEM160Q9NX00 188 aa13.11□□□□□ -0.31
SFXN1-208ENST00000507823 KIF25-AS1Q9Y6Z4 181 aa13.11□□□□□ -0.31
SFXN1-208ENST00000507823 MUC4Q99102 2169 aa13.11□□□□□ -0.31
SFXN1-208ENST00000507823 FHL3Q13643 280 aa13.1□□□□□ -0.31
SFXN1-208ENST00000507823 KLHL30-AS1Q8NEE0 82 aa13.1□□□□□ -0.31
SFXN1-208ENST00000507823 DLX4Q92988 240 aaPredicted RBP13.1□□□□□ -0.31
SFXN1-208ENST00000507823 C9orf85Q96MD7 179 aa13.1□□□□□ -0.31
SFXN1-208ENST00000507823 AP1S3Q96PC3 154 aa13.1□□□□□ -0.31
SFXN1-208ENST00000507823 TRAV12-3A0A0B4J271 114 aa13.1□□□□□ -0.31
SFXN1-208ENST00000507823 YAE1D1Q9NRH1 226 aa13.1□□□□□ -0.31
SFXN1-208ENST00000507823 TIMM8BQ9Y5J9 83 aaPredicted RBP13.1□□□□□ -0.31
SFXN1-208ENST00000507823 TRAV26-2A0A0B4J265 109 aa13.09□□□□□ -0.31
SFXN1-208ENST00000507823 IFI27L1Q96BM0 104 aa13.09□□□□□ -0.31
SFXN1-208ENST00000507823 C20orf78Q9BR46 151 aa13.09□□□□□ -0.31
SFXN1-208ENST00000507823 SONP18583 2426 aaKnown RBP13.09□□□□□ -0.31
SFXN1-208ENST00000507823 IGHV3-16A0A0C4DH30 117 aa13.09□□□□□ -0.31
SFXN1-208ENST00000507823 LINC00315P59091 139 aa13.09□□□□□ -0.31
SFXN1-208ENST00000507823 RASL10AQ92737 203 aa13.09□□□□□ -0.31
SFXN1-208ENST00000507823 MRPS16Q9Y3D3 137 aaKnown RBP13.09□□□□□ -0.31
SFXN1-208ENST00000507823 UNC79Q9P2D8 2635 aa13.08□□□□□ -0.31
SFXN1-208ENST00000507823 SCGB2A2Q13296 93 aa13.08□□□□□ -0.32
SFXN1-208ENST00000507823 SPRY2O43597 315 aa13.08□□□□□ -0.32
SFXN1-208ENST00000507823 HLA-DRB4P13762 266 aa13.08□□□□□ -0.32
SFXN1-208ENST00000507823 TMEM61Q8N0U2 210 aa13.08□□□□□ -0.32
SFXN1-208ENST00000507823 C14orf178Q8N769 122 aaPredicted RBP13.08□□□□□ -0.32
SFXN1-208ENST00000507823 HLA-DRB4X5D2U9 266 aa13.08□□□□□ -0.32
SFXN1-208ENST00000507823 hDV102S1A0JD36 115 aa13.07□□□□□ -0.32
SFXN1-208ENST00000507823 FXYD7P58549 80 aa13.07□□□□□ -0.32
SFXN1-208ENST00000507823 DEFB114Q30KQ6 69 aa13.07□□□□□ -0.32
SFXN1-208ENST00000507823 Q6ZN92 141 aa13.07□□□□□ -0.32
SFXN1-208ENST00000507823 MCRIP2Q9BUT9 160 aaKnown RBP13.07□□□□□ -0.32
SFXN1-208ENST00000507823 SMIM2Q9BVW6 85 aa13.07□□□□□ -0.32
SFXN1-208ENST00000507823 IGHV1OR15-1A0A075B7D0 117 aa13.07□□□□□ -0.32
SFXN1-208ENST00000507823 K7EMI3 77 aa13.07□□□□□ -0.32
SFXN1-208ENST00000507823 CD7P09564 240 aa13.07□□□□□ -0.32
SFXN1-208ENST00000507823 RAX2Q96IS3 184 aa13.07□□□□□ -0.32
SFXN1-208ENST00000507823 DUX3Q96PT4 197 aa13.07□□□□□ -0.32
SFXN1-208ENST00000507823 AGRNO00468 2067 aa13.06□□□□□ -0.32
SFXN1-208ENST00000507823 ITPR2Q14571 2701 aa13.06□□□□□ -0.32
SFXN1-208ENST00000507823 HSBP1L1C9JCN9 74 aa13.06□□□□□ -0.32
SFXN1-208ENST00000507823 PPP1R17O96001 155 aa13.06□□□□□ -0.32
SFXN1-208ENST00000507823 LAGE3Q14657 143 aa13.06□□□□□ -0.32
SFXN1-208ENST00000507823 KHDC1LQ5JSQ8 128 aa13.06□□□□□ -0.32
SFXN1-208ENST00000507823 HNRNPA3P51991 378 aaKnown RBP13.06□□□□□ -0.32
SFXN1-208ENST00000507823 SPINK13Q1W4C9 94 aa13.06□□□□□ -0.32
SFXN1-208ENST00000507823 TRAV12-2A0A075B6T6 113 aa13.05□□□□□ -0.32
SFXN1-208ENST00000507823 H3BMM0 161 aa13.05□□□□□ -0.32
SFXN1-208ENST00000507823 RPL32P62910 135 aaKnown RBP13.05□□□□□ -0.32
SFXN1-208ENST00000507823 TMEM158Q8WZ71 300 aa13.05□□□□□ -0.32
SFXN1-208ENST00000507823 TRAV25A0A0B4J276 109 aa13.05□□□□□ -0.32
SFXN1-208ENST00000507823 A0A1B0GV90 55 aa13.05□□□□□ -0.32
SFXN1-208ENST00000507823 IGKV3-20P01619 116 aa13.05□□□□□ -0.32
SFXN1-208ENST00000507823 DEFB131AP59861 70 aa13.05□□□□□ -0.32
SFXN1-208ENST00000507823 SUMO2P61956 95 aaKnown RBP13.05□□□□□ -0.32
SFXN1-208ENST00000507823 GOLT1BQ9Y3E0 138 aa13.05□□□□□ -0.32
SFXN1-208ENST00000507823 H0Y8G0 127 aa13.04□□□□□ -0.32
SFXN1-208ENST00000507823 PMCHL2Q9BQD1 86 aa13.04□□□□□ -0.32
SFXN1-208ENST00000507823 Q8N1Y9 231 aa13.04□□□□□ -0.32
SFXN1-208ENST00000507823 LINC01006Q8NI28 216 aa13.04□□□□□ -0.32
SFXN1-208ENST00000507823 CLUHP3Q96NS8 147 aa13.04□□□□□ -0.32
SFXN1-208ENST00000507823 SPAG8Q99932 426 aaPredicted RBP13.04□□□□□ -0.32
SFXN1-208ENST00000507823 DYNLRB2Q8TF09 96 aa13.03□□□□□ -0.32
SFXN1-208ENST00000507823 ZMAT4Q9H898 229 aa13.03□□□□□ -0.32
SFXN1-208ENST00000507823 KNCNA6PVL3 124 aa13.03□□□□□ -0.32
SFXN1-208ENST00000507823 CD28P10747 220 aa13.03□□□□□ -0.32
SFXN1-208ENST00000507823 HILS1P60008 231 aa13.03□□□□□ -0.32
SFXN1-208ENST00000507823 NUTF2P61970 127 aaKnown RBP13.03□□□□□ -0.32
SFXN1-208ENST00000507823 MAP6D1Q9H9H5 199 aa13.03□□□□□ -0.32
SFXN1-208ENST00000507823 ZNF256Q9Y2P7 627 aaPredicted RBP13.03□□□□□ -0.32
SFXN1-208ENST00000507823 SORL1Q92673 2214 aa13.02□□□□□ -0.32
SFXN1-208ENST00000507823 MDFICQ9P1T7 246 aa13.02□□□□□ -0.32
SFXN1-208ENST00000507823 RBMY1BA6NDE4 496 aaKnown RBP13.02□□□□□ -0.33
SFXN1-208ENST00000507823 RBMY1EA6NEQ0 496 aaKnown RBP13.02□□□□□ -0.33
SFXN1-208ENST00000507823 ATP5LO75964 103 aa13.02□□□□□ -0.33
SFXN1-208ENST00000507823 RBMY1DP0C7P1 496 aaKnown RBP13.02□□□□□ -0.33
SFXN1-208ENST00000507823 SMIM17P0DL12 118 aa13.02□□□□□ -0.33
SFXN1-208ENST00000507823 TSSC4Q9Y5U2 329 aaPredicted RBP13.02□□□□□ -0.33
SFXN1-208ENST00000507823 TRGV11A0A075B6L2 103 aa13.01□□□□□ -0.33
SFXN1-208ENST00000507823 CCL24O00175 119 aa13.01□□□□□ -0.33
SFXN1-208ENST00000507823 RPL39LQ96EH5 51 aaKnown RBP13.01□□□□□ -0.33
SFXN1-208ENST00000507823 NDUFA7O95182 113 aa13.01□□□□□ -0.33
SFXN1-208ENST00000507823 MGPP08493 103 aa13.01□□□□□ -0.33
SFXN1-208ENST00000507823 RBMY1A1P0DJD3 496 aaKnown RBP13.01□□□□□ -0.33
SFXN1-208ENST00000507823 RBMY1CP0DJD4 496 aa13.01□□□□□ -0.33
SFXN1-208ENST00000507823 RBMY1FQ15415 496 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms