RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 STOML3Q8TAV4 291 aa9.77□□□□□ -0.85
HMGCS1-203ENST00000507004 SCRT2Q9NQ03 307 aa9.77□□□□□ -0.85
HMGCS1-203ENST00000507004 HSPG2P98160 4391 aa9.76□□□□□ -0.85
HMGCS1-203ENST00000507004 ASIPP42127 132 aa9.76□□□□□ -0.85
HMGCS1-203ENST00000507004 OR10J3Q5JRS4 329 aa9.76□□□□□ -0.85
HMGCS1-203ENST00000507004 ZNF506Q5JVG8 444 aa9.76□□□□□ -0.85
HMGCS1-203ENST00000507004 C11orf21Q9P2W6 132 aa9.76□□□□□ -0.85
HMGCS1-203ENST00000507004 ZFP30Q9Y2G7 519 aa9.76□□□□□ -0.85
HMGCS1-203ENST00000507004 DNAH5Q8TE73 4624 aa9.75□□□□□ -0.85
HMGCS1-203ENST00000507004 IBA57-AS1B1ANH7 110 aa9.75□□□□□ -0.85
HMGCS1-203ENST00000507004 RHODO00212 210 aa9.75□□□□□ -0.85
HMGCS1-203ENST00000507004 PEX7O00628 323 aa9.75□□□□□ -0.85
HMGCS1-203ENST00000507004 PSCAO43653 123 aa9.75□□□□□ -0.85
HMGCS1-203ENST00000507004 RNASE3P12724 160 aaKnown RBP9.75□□□□□ -0.85
HMGCS1-203ENST00000507004 Q5BKY6 102 aa9.75□□□□□ -0.85
HMGCS1-203ENST00000507004 SYT8Q8NBV8 401 aa9.75□□□□□ -0.85
HMGCS1-203ENST00000507004 ATP6V0E2Q8NHE4 81 aa9.75□□□□□ -0.85
HMGCS1-203ENST00000507004 NTN5Q8WTR8 489 aaPredicted RBP9.75□□□□□ -0.85
HMGCS1-203ENST00000507004 GTSF1LQ9H1H1 148 aa9.75□□□□□ -0.85
HMGCS1-203ENST00000507004 IL36BQ9NZH7 164 aa9.75□□□□□ -0.85
HMGCS1-203ENST00000507004 ARL2-SNX15V9GYD0 113 aa9.75□□□□□ -0.85
HMGCS1-203ENST00000507004 LOC100131303A0A0U1RQF7 123 aa9.74□□□□□ -0.85
HMGCS1-203ENST00000507004 PGPEP1LA6NFU8 196 aa9.74□□□□□ -0.85
HMGCS1-203ENST00000507004 FHITP49789 147 aa9.74□□□□□ -0.85
HMGCS1-203ENST00000507004 FGF8P55075 233 aaPredicted RBP9.74□□□□□ -0.85
HMGCS1-203ENST00000507004 LAGE3Q14657 143 aa9.74□□□□□ -0.85
HMGCS1-203ENST00000507004 RGS21Q2M5E4 152 aa9.74□□□□□ -0.85
HMGCS1-203ENST00000507004 DNLZQ5SXM8 178 aa9.74□□□□□ -0.85
HMGCS1-203ENST00000507004 COX8CQ7Z4L0 72 aa9.74□□□□□ -0.85
HMGCS1-203ENST00000507004 KRTAP4-5Q9BYR2 181 aa9.74□□□□□ -0.85
HMGCS1-203ENST00000507004 TNFRSF18Q9Y5U5 241 aa9.74□□□□□ -0.85
HMGCS1-203ENST00000507004 A0A087WWC5 75 aa9.73□□□□□ -0.85
HMGCS1-203ENST00000507004 FAM74A7A6NL05 159 aa9.73□□□□□ -0.85
HMGCS1-203ENST00000507004 SEC11BP0C7V7 166 aa9.73□□□□□ -0.85
HMGCS1-203ENST00000507004 LGALSLQ3ZCW2 172 aaPredicted RBP9.73□□□□□ -0.85
HMGCS1-203ENST00000507004 TOR2AQ5JU69 321 aa9.73□□□□□ -0.85
HMGCS1-203ENST00000507004 DPPA3Q6W0C5 159 aa9.73□□□□□ -0.85
HMGCS1-203ENST00000507004 Q86TA4 180 aa9.73□□□□□ -0.85
HMGCS1-203ENST00000507004 FMC1Q96HJ9 113 aa9.73□□□□□ -0.85
HMGCS1-203ENST00000507004 TM2D2Q9BX73 214 aa9.73□□□□□ -0.85
HMGCS1-203ENST00000507004 PARLQ9H300 379 aa9.73□□□□□ -0.85
HMGCS1-203ENST00000507004 IGKV3D-20A0A0C4DH25 116 aa9.72□□□□□ -0.85
HMGCS1-203ENST00000507004 TRBV6-1A0A0K0K1D8 114 aa9.72□□□□□ -0.85
HMGCS1-203ENST00000507004 MAP1LC3B2A6NCE7 125 aa9.72□□□□□ -0.85
HMGCS1-203ENST00000507004 B4DEV8 164 aa9.72□□□□□ -0.85
HMGCS1-203ENST00000507004 UBE2G1P62253 170 aa9.72□□□□□ -0.85
HMGCS1-203ENST00000507004 ZNF726P1Q15940 193 aa9.72□□□□□ -0.85
HMGCS1-203ENST00000507004 MAP1LC3BQ9GZQ8 125 aa9.72□□□□□ -0.85
HMGCS1-203ENST00000507004 ABCA13Q86UQ4 5058 aa9.71□□□□□ -0.86
HMGCS1-203ENST00000507004 IGHV3-73A0A0B4J1V6 119 aa9.71□□□□□ -0.86
HMGCS1-203ENST00000507004 TRAV34A0A0B4J273 112 aa9.71□□□□□ -0.86
HMGCS1-203ENST00000507004 EPM2AB3EWF7 344 aa9.71□□□□□ -0.86
HMGCS1-203ENST00000507004 ARPC5O15511 151 aa9.71□□□□□ -0.86
HMGCS1-203ENST00000507004 S100A9P06702 114 aaKnown RBP9.71□□□□□ -0.86
HMGCS1-203ENST00000507004 GCSHP23434 173 aa9.71□□□□□ -0.86
HMGCS1-203ENST00000507004 UBE2G2P60604 165 aa9.71□□□□□ -0.86
HMGCS1-203ENST00000507004 FAM162BQ5T6X4 162 aa9.71□□□□□ -0.86
HMGCS1-203ENST00000507004 APOBP04114 4563 aaKnown RBP9.7□□□□□ -0.86
HMGCS1-203ENST00000507004 TRAV8-3A0A0A6YYJ7 113 aa9.7□□□□□ -0.86
HMGCS1-203ENST00000507004 UMAD1C9J7I0 102 aa9.7□□□□□ -0.86
HMGCS1-203ENST00000507004 ZNF345Q14585 488 aa9.7□□□□□ -0.86
HMGCS1-203ENST00000507004 OR11H4Q8NGC9 324 aa9.7□□□□□ -0.86
HMGCS1-203ENST00000507004 LINC00479Q96M42 142 aa9.7□□□□□ -0.86
HMGCS1-203ENST00000507004 COX11Q9Y6N1 276 aa9.7□□□□□ -0.86
HMGCS1-203ENST00000507004 TPT1P13693 172 aaKnown RBP9.69□□□□□ -0.86
HMGCS1-203ENST00000507004 EIF5AP63241 154 aaKnown RBP9.69□□□□□ -0.86
HMGCS1-203ENST00000507004 FRZBQ92765 325 aa9.69□□□□□ -0.86
HMGCS1-203ENST00000507004 PHLDA3Q9Y5J5 127 aa9.69□□□□□ -0.86
HMGCS1-203ENST00000507004 IGLV5-52A0A0A0MRZ9 124 aa9.68□□□□□ -0.86
HMGCS1-203ENST00000507004 KRBOX1C9JBD0 128 aa9.68□□□□□ -0.86
HMGCS1-203ENST00000507004 ARMS2P0C7Q2 107 aa9.68□□□□□ -0.86
HMGCS1-203ENST00000507004 LINC00694P0DN24 101 aa9.68□□□□□ -0.86
HMGCS1-203ENST00000507004 LINC01559Q495D7 138 aa9.68□□□□□ -0.86
HMGCS1-203ENST00000507004 CST9LP1Q5W188 147 aa9.68□□□□□ -0.86
HMGCS1-203ENST00000507004 TMEM70Q9BUB7 260 aa9.68□□□□□ -0.86
HMGCS1-203ENST00000507004 CYTL1Q9NRR1 136 aa9.68□□□□□ -0.86
HMGCS1-203ENST00000507004 TRBV10-1A0A0K0K1A3 114 aa9.67□□□□□ -0.86
HMGCS1-203ENST00000507004 LRCOL1A6NCL2 159 aa9.67□□□□□ -0.86
HMGCS1-203ENST00000507004 GAGE12JA6NER3 117 aa9.67□□□□□ -0.86
HMGCS1-203ENST00000507004 H3BVH4 76 aa9.67□□□□□ -0.86
HMGCS1-203ENST00000507004 SH2D1AO60880 128 aa9.67□□□□□ -0.86
HMGCS1-203ENST00000507004 LTAP01374 205 aa9.67□□□□□ -0.86
HMGCS1-203ENST00000507004 IGHV3-30P01768 117 aa9.67□□□□□ -0.86
HMGCS1-203ENST00000507004 IGHV3-33P01772 117 aa9.67□□□□□ -0.86
HMGCS1-203ENST00000507004 IGHV3-30-3P0DP02 117 aa9.67□□□□□ -0.86
HMGCS1-203ENST00000507004 IGHV3-30-5P0DP03 117 aa9.67□□□□□ -0.86
HMGCS1-203ENST00000507004 AKR1C3P42330 323 aa9.67□□□□□ -0.86
HMGCS1-203ENST00000507004 GAGE1Q13065 139 aa9.67□□□□□ -0.86
HMGCS1-203ENST00000507004 GAGE4Q13068 117 aa9.67□□□□□ -0.86
HMGCS1-203ENST00000507004 GAGE5Q13069 117 aa9.67□□□□□ -0.86
HMGCS1-203ENST00000507004 ZNF674Q2M3X9 581 aa9.67□□□□□ -0.86
HMGCS1-203ENST00000507004 GAGE13Q4V321 117 aa9.67□□□□□ -0.86
HMGCS1-203ENST00000507004 ZFP82Q8N141 532 aa9.67□□□□□ -0.86
HMGCS1-203ENST00000507004 RMI2Q96E14 147 aa9.67□□□□□ -0.86
HMGCS1-203ENST00000507004 ZC2HC1AQ96GY0 325 aa9.67□□□□□ -0.86
HMGCS1-203ENST00000507004 A0A0D9SG52 128 aa9.66□□□□□ -0.86
HMGCS1-203ENST00000507004 G3V3Q6 166 aa9.66□□□□□ -0.86
HMGCS1-203ENST00000507004 PFDN1O60925 122 aa9.66□□□□□ -0.86
HMGCS1-203ENST00000507004 C1QBP02746 253 aa9.66□□□□□ -0.86
HMGCS1-203ENST00000507004 CXCL1P09341 107 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms