RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 PRR20CP86479 221 aa3.7□□□□□ -1.82
NEAT1-202ENST00000501122 PRR20DP86480 221 aa3.7□□□□□ -1.82
NEAT1-202ENST00000501122 PRR20BP86481 221 aa3.7□□□□□ -1.82
NEAT1-202ENST00000501122 PRR20AP86496 221 aa3.7□□□□□ -1.82
NEAT1-202ENST00000501122 SPATA31D1Q6ZQQ2 1576 aa3.7□□□□□ -1.82
NEAT1-202ENST00000501122 IGKV1-27A0A075B6S5 117 aa3.7□□□□□ -1.82
NEAT1-202ENST00000501122 IGHV1-18A0A0C4DH31 117 aa3.7□□□□□ -1.82
NEAT1-202ENST00000501122 A0A0J9YXV3 536 aa3.7□□□□□ -1.82
NEAT1-202ENST00000501122 IGHV4-4A0A075B6R2 117 aa3.7□□□□□ -1.82
NEAT1-202ENST00000501122 LINC00473A8K010 186 aa3.7□□□□□ -1.82
NEAT1-202ENST00000501122 IGKV1-6A0A0C4DH72 117 aa3.7□□□□□ -1.82
NEAT1-202ENST00000501122 C8orf87E5RJ46 101 aa3.7□□□□□ -1.82
NEAT1-202ENST00000501122 TEX22C9J3V5 150 aa3.7□□□□□ -1.82
NEAT1-202ENST00000501122 ITLN1Q8WWA0 313 aa3.7□□□□□ -1.82
NEAT1-202ENST00000501122 PPRC1Q5VV67 1664 aaKnown RBP3.7□□□□□ -1.82
NEAT1-202ENST00000501122 BUB1B-PAK6H3BSN5 160 aa3.7□□□□□ -1.82
NEAT1-202ENST00000501122 IGHV3-30P01768 117 aa3.7□□□□□ -1.82
NEAT1-202ENST00000501122 IGHV3-30-3P0DP02 117 aa3.7□□□□□ -1.82
NEAT1-202ENST00000501122 IGHV3-30-5P0DP03 117 aa3.7□□□□□ -1.82
NEAT1-202ENST00000501122 Q8N6K4 173 aa3.7□□□□□ -1.82
NEAT1-202ENST00000501122 TRGV4A0A0C4DH28 118 aa3.7□□□□□ -1.82
NEAT1-202ENST00000501122 C20orf204Q6ZNR8 217 aa3.7□□□□□ -1.82
NEAT1-202ENST00000501122 A0A0J9YXY3 114 aa3.7□□□□□ -1.82
NEAT1-202ENST00000501122 BCE1O60756 84 aa3.7□□□□□ -1.82
NEAT1-202ENST00000501122 HHLA3Q9XRX5 114 aa3.7□□□□□ -1.82
NEAT1-202ENST00000501122 FOXS1O43638 330 aa3.69□□□□□ -1.82
NEAT1-202ENST00000501122 LINC00310P59036 64 aa3.69□□□□□ -1.82
NEAT1-202ENST00000501122 CFHR3Q02985 330 aa3.69□□□□□ -1.82
NEAT1-202ENST00000501122 SPAG11BQ08648 103 aa3.69□□□□□ -1.82
NEAT1-202ENST00000501122 SPAG11AQ6PDA7 123 aa3.69□□□□□ -1.82
NEAT1-202ENST00000501122 DKK1O94907 266 aa3.69□□□□□ -1.82
NEAT1-202ENST00000501122 MAP3K4Q9Y6R4 1608 aa3.69□□□□□ -1.82
NEAT1-202ENST00000501122 HTN3P15516 51 aa3.69□□□□□ -1.82
NEAT1-202ENST00000501122 TRGV3P03979 118 aa3.69□□□□□ -1.82
NEAT1-202ENST00000501122 WFDC10AQ9H1F0 79 aa3.69□□□□□ -1.82
NEAT1-202ENST00000501122 DUOX1Q9NRD9 1551 aa3.69□□□□□ -1.82
NEAT1-202ENST00000501122 CCL5P13501 91 aa3.69□□□□□ -1.82
NEAT1-202ENST00000501122 U3KQK5 164 aa3.69□□□□□ -1.82
NEAT1-202ENST00000501122 CCL3P10147 92 aa3.69□□□□□ -1.82
NEAT1-202ENST00000501122 USP9XQ93008 2570 aaPredicted RBP3.69□□□□□ -1.82
NEAT1-202ENST00000501122 NDUFA4L2Q9NRX3 87 aa3.69□□□□□ -1.82
NEAT1-202ENST00000501122 LCA10Q71F78 164 aa3.69□□□□□ -1.82
NEAT1-202ENST00000501122 LRRK2Q5S007 2527 aa3.68□□□□□ -1.82
NEAT1-202ENST00000501122 ALPK3Q96L96 1907 aa3.68□□□□□ -1.82
NEAT1-202ENST00000501122 TMEM263Q8WUH6 116 aaKnown RBP3.68□□□□□ -1.82
NEAT1-202ENST00000501122 IGKV1-39P01597 117 aa3.68□□□□□ -1.82
NEAT1-202ENST00000501122 IGKV1D-39P04432 117 aa3.68□□□□□ -1.82
NEAT1-202ENST00000501122 FAM167A-AS1Q96KT0 104 aa3.68□□□□□ -1.82
NEAT1-202ENST00000501122 RNF5Q99942 180 aa3.68□□□□□ -1.82
NEAT1-202ENST00000501122 RPL39LQ96EH5 51 aaKnown RBP3.68□□□□□ -1.82
NEAT1-202ENST00000501122 MSRB1Q9NZV6 116 aa3.68□□□□□ -1.82
NEAT1-202ENST00000501122 MIR7-3HGQ8N6C7 128 aa3.68□□□□□ -1.82
NEAT1-202ENST00000501122 Q96MF0 132 aa3.68□□□□□ -1.82
NEAT1-202ENST00000501122 NHLRC4P0CG21 123 aaPredicted RBP3.68□□□□□ -1.82
NEAT1-202ENST00000501122 KLK9Q9UKQ9 250 aa3.68□□□□□ -1.82
NEAT1-202ENST00000501122 PRRC2CQ9Y520 2896 aaKnown RBP3.68□□□□□ -1.82
NEAT1-202ENST00000501122 MBD6Q96DN6 1003 aa3.68□□□□□ -1.82
NEAT1-202ENST00000501122 ZNF837Q96EG3 531 aaPredicted RBP3.68□□□□□ -1.82
NEAT1-202ENST00000501122 RLFQ13129 1914 aa3.68□□□□□ -1.82
NEAT1-202ENST00000501122 IGHV1-3A0A0C4DH29 117 aa3.68□□□□□ -1.82
NEAT1-202ENST00000501122 ATP11AUNQ6ZP68 121 aa3.68□□□□□ -1.82
NEAT1-202ENST00000501122 PRO0461Q9UI25 63 aa3.68□□□□□ -1.82
NEAT1-202ENST00000501122 N4BP2Q86UW6 1770 aaPredicted RBP3.68□□□□□ -1.82
NEAT1-202ENST00000501122 ZNF73O43830 326 aaPredicted RBP3.67□□□□□ -1.82
NEAT1-202ENST00000501122 UBE2D1P51668 147 aa3.67□□□□□ -1.82
NEAT1-202ENST00000501122 KTN1-AS1Q86SY8 53 aa3.67□□□□□ -1.82
NEAT1-202ENST00000501122 SIT1Q9Y3P8 196 aa3.67□□□□□ -1.82
NEAT1-202ENST00000501122 IGHV4OR15-8A0A075B7B6 117 aa3.67□□□□□ -1.82
NEAT1-202ENST00000501122 A0A087WW49 117 aa3.67□□□□□ -1.82
NEAT1-202ENST00000501122 NEXN-AS1Q8NBZ9 246 aa3.67□□□□□ -1.82
NEAT1-202ENST00000501122 HCG22E2RYF7 251 aa3.67□□□□□ -1.82
NEAT1-202ENST00000501122 ZNF672Q499Z4 452 aaPredicted RBP3.67□□□□□ -1.82
NEAT1-202ENST00000501122 TPSG1Q9NRR2 321 aa3.67□□□□□ -1.82
NEAT1-202ENST00000501122 SLPIP03973 132 aa3.67□□□□□ -1.82
NEAT1-202ENST00000501122 CD59P13987 128 aa3.67□□□□□ -1.82
NEAT1-202ENST00000501122 RIMS1Q86UR5 1692 aaKnown RBP3.67□□□□□ -1.82
NEAT1-202ENST00000501122 NAV1Q8NEY1 1877 aa3.67□□□□□ -1.82
NEAT1-202ENST00000501122 CENPFP49454 3210 aa3.67□□□□□ -1.82
NEAT1-202ENST00000501122 C10orf55Q5SWW7 151 aa3.67□□□□□ -1.82
NEAT1-202ENST00000501122 TDRD15B5MCY1 1934 aaKnown RBP3.67□□□□□ -1.82
NEAT1-202ENST00000501122 ZNF491Q8N8L2 437 aa3.67□□□□□ -1.82
NEAT1-202ENST00000501122 TRGV1A0A0A0MS02 117 aa3.67□□□□□ -1.82
NEAT1-202ENST00000501122 CEMP1Q6PRD7 247 aaPredicted RBP3.67□□□□□ -1.82
NEAT1-202ENST00000501122 SLC22A18ASQ8N1D0 253 aa3.67□□□□□ -1.82
NEAT1-202ENST00000501122 COL22A1Q8NFW1 1626 aaPredicted RBP3.67□□□□□ -1.82
NEAT1-202ENST00000501122 KCPQ6ZWJ8 1503 aa3.67□□□□□ -1.82
NEAT1-202ENST00000501122 FAM27E3Q08E93 113 aa3.67□□□□□ -1.82
NEAT1-202ENST00000501122 IGHV3-53P01767 116 aa3.67□□□□□ -1.82
NEAT1-202ENST00000501122 CRIP2P52943 208 aaPredicted RBP3.67□□□□□ -1.82
NEAT1-202ENST00000501122 RSPO1Q2MKA7 263 aaPredicted RBP3.67□□□□□ -1.82
NEAT1-202ENST00000501122 RNASE3P12724 160 aaKnown RBP3.67□□□□□ -1.82
NEAT1-202ENST00000501122 MYO5AQ9Y4I1 1855 aaKnown RBP3.67□□□□□ -1.82
NEAT1-202ENST00000501122 IGHV7-4-1A0A0J9YVY3 117 aa3.67□□□□□ -1.82
NEAT1-202ENST00000501122 C17orf100A8MU93 164 aa3.67□□□□□ -1.82
NEAT1-202ENST00000501122 C11orf1Q9H5F2 150 aa3.67□□□□□ -1.82
NEAT1-202ENST00000501122 LY6EQ16553 131 aa3.66□□□□□ -1.82
NEAT1-202ENST00000501122 C15orf32Q32M92 178 aa3.66□□□□□ -1.82
NEAT1-202ENST00000501122 C19orf71A6NCJ1 209 aa3.66□□□□□ -1.82
NEAT1-202ENST00000501122 IGKV4-1P06312 121 aa3.66□□□□□ -1.82
NEAT1-202ENST00000501122 TRBV10-3A0A0K0K1G6 114 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms