RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 RPL19P84098 196 aaKnown RBP10.91□□□□□ -0.66
CPNE1-228ENST00000498814 PEA15Q15121 130 aa10.91□□□□□ -0.66
CPNE1-228ENST00000498814 PIK3CD-AS1Q5SR53 167 aa10.91□□□□□ -0.66
CPNE1-228ENST00000498814 POM121L12Q8N7R1 296 aa10.91□□□□□ -0.66
CPNE1-228ENST00000498814 C15orf53Q8NAA6 179 aa10.91□□□□□ -0.66
CPNE1-228ENST00000498814 LINC00476Q8WZB0 136 aa10.91□□□□□ -0.66
CPNE1-228ENST00000498814 DAZAP1Q96EP5 407 aaKnown RBP10.91□□□□□ -0.66
CPNE1-228ENST00000498814 SCRT2Q9NQ03 307 aa10.91□□□□□ -0.66
CPNE1-228ENST00000498814 H3BNG1 76 aa10.9□□□□□ -0.66
CPNE1-228ENST00000498814 IGHV3-53P01767 116 aa10.9□□□□□ -0.66
CPNE1-228ENST00000498814 MED14OSP0DP75 135 aa10.9□□□□□ -0.66
CPNE1-228ENST00000498814 FHL2Q14192 279 aa10.9□□□□□ -0.66
CPNE1-228ENST00000498814 LGALS9CQ6DKI2 356 aa10.9□□□□□ -0.66
CPNE1-228ENST00000498814 OR4C5Q8NGB2 326 aa10.9□□□□□ -0.66
CPNE1-228ENST00000498814 ZNF479Q96JC4 524 aa10.9□□□□□ -0.66
CPNE1-228ENST00000498814 SMIM7Q9BQ49 75 aa10.9□□□□□ -0.66
CPNE1-228ENST00000498814 LY96Q9Y6Y9 160 aa10.9□□□□□ -0.66
CPNE1-228ENST00000498814 ALMS1Q8TCU4 4167 aa10.89□□□□□ -0.67
CPNE1-228ENST00000498814 TRAV26-1A0A087WT03 109 aa10.89□□□□□ -0.67
CPNE1-228ENST00000498814 ZNF727A8MUV8 499 aa10.89□□□□□ -0.67
CPNE1-228ENST00000498814 K7EN84 100 aa10.89□□□□□ -0.67
CPNE1-228ENST00000498814 RPS20P60866 119 aaKnown RBP10.89□□□□□ -0.67
CPNE1-228ENST00000498814 SRSF3P84103 164 aaKnown RBP10.89□□□□□ -0.67
CPNE1-228ENST00000498814 SLAQ13239 276 aa10.89□□□□□ -0.67
CPNE1-228ENST00000498814 CLLU1Q5K131 121 aa10.89□□□□□ -0.67
CPNE1-228ENST00000498814 C9JQL5 133 aa10.88□□□□□ -0.67
CPNE1-228ENST00000498814 RS1O15537 224 aa10.88□□□□□ -0.67
CPNE1-228ENST00000498814 CIDEAO60543 219 aa10.88□□□□□ -0.67
CPNE1-228ENST00000498814 P01737 135 aa10.88□□□□□ -0.67
CPNE1-228ENST00000498814 SFTA3P0C7M3 94 aa10.88□□□□□ -0.67
CPNE1-228ENST00000498814 FAM74A3Q4VXF1 159 aa10.88□□□□□ -0.67
CPNE1-228ENST00000498814 SYT8Q8NBV8 401 aa10.88□□□□□ -0.67
CPNE1-228ENST00000498814 NUDT10Q8NFP7 164 aa10.88□□□□□ -0.67
CPNE1-228ENST00000498814 OR2D3Q8NGH3 330 aa10.88□□□□□ -0.67
CPNE1-228ENST00000498814 NUDT11Q96G61 164 aa10.88□□□□□ -0.67
CPNE1-228ENST00000498814 VSIG2Q96IQ7 327 aa10.88□□□□□ -0.67
CPNE1-228ENST00000498814 SSBP4Q9BWG4 385 aaPredicted RBP10.88□□□□□ -0.67
CPNE1-228ENST00000498814 PRO0255Q9UI72 69 aa10.88□□□□□ -0.67
CPNE1-228ENST00000498814 PHLDA3Q9Y5J5 127 aa10.88□□□□□ -0.67
CPNE1-228ENST00000498814 TRGV4A0A0C4DH28 118 aa10.87□□□□□ -0.67
CPNE1-228ENST00000498814 A0A0J9YY99 117 aa10.87□□□□□ -0.67
CPNE1-228ENST00000498814 LY6G6CO95867 125 aa10.87□□□□□ -0.67
CPNE1-228ENST00000498814 CFAP126Q5VTH2 177 aa10.87□□□□□ -0.67
CPNE1-228ENST00000498814 DMRTA1Q5VZB9 504 aa10.87□□□□□ -0.67
CPNE1-228ENST00000498814 HHLA3Q9XRX5 114 aa10.87□□□□□ -0.67
CPNE1-228ENST00000498814 DNAH1Q9P2D7 4330 aa10.86□□□□□ -0.67
CPNE1-228ENST00000498814 SACSQ9NZJ4 4579 aa10.86□□□□□ -0.67
CPNE1-228ENST00000498814 XKRY2A2RUG3 117 aa10.86□□□□□ -0.67
CPNE1-228ENST00000498814 A8MWV9 139 aa10.86□□□□□ -0.67
CPNE1-228ENST00000498814 SNAI2O43623 268 aa10.86□□□□□ -0.67
CPNE1-228ENST00000498814 OR5AL1P0C617 328 aa10.86□□□□□ -0.67
CPNE1-228ENST00000498814 P0DMU3 169 aa10.86□□□□□ -0.67
CPNE1-228ENST00000498814 FAM231AP0DMU4 169 aa10.86□□□□□ -0.67
CPNE1-228ENST00000498814 FAM231CP0DMU5 169 aa10.86□□□□□ -0.67
CPNE1-228ENST00000498814 CRYBA4P53673 196 aa10.86□□□□□ -0.67
CPNE1-228ENST00000498814 ZFP82Q8N141 532 aa10.86□□□□□ -0.67
CPNE1-228ENST00000498814 PAX4O43316 350 aa10.85□□□□□ -0.67
CPNE1-228ENST00000498814 NUDT3O95989 172 aa10.85□□□□□ -0.67
CPNE1-228ENST00000498814 IGLC6P0CF74 106 aa10.85□□□□□ -0.67
CPNE1-228ENST00000498814 FAM231DQ6ZW35 169 aa10.85□□□□□ -0.67
CPNE1-228ENST00000498814 LINC01551Q86U37 167 aa10.85□□□□□ -0.67
CPNE1-228ENST00000498814 RNASE7Q9H1E1 156 aaKnown RBP10.85□□□□□ -0.67
CPNE1-228ENST00000498814 M0R381 172 aa10.84□□□□□ -0.67
CPNE1-228ENST00000498814 NXPH4O95158 308 aa10.84□□□□□ -0.67
CPNE1-228ENST00000498814 GZMBP10144 247 aa10.84□□□□□ -0.67
CPNE1-228ENST00000498814 GATA1P15976 413 aaPredicted RBP10.84□□□□□ -0.67
CPNE1-228ENST00000498814 TMEM241Q24JQ0 296 aa10.84□□□□□ -0.67
CPNE1-228ENST00000498814 ZFP2Q6ZN57 461 aa10.84□□□□□ -0.67
CPNE1-228ENST00000498814 OR10AG1Q8NH19 301 aa10.84□□□□□ -0.67
CPNE1-228ENST00000498814 RPP21Q9H633 154 aaKnown RBP10.84□□□□□ -0.67
CPNE1-228ENST00000498814 RYR2Q92736 4967 aa10.83□□□□□ -0.68
CPNE1-228ENST00000498814 SOHLH1Q5JUK2 328 aa10.83□□□□□ -0.68
CPNE1-228ENST00000498814 FER1L6-AS1Q8NA97 138 aa10.83□□□□□ -0.68
CPNE1-228ENST00000498814 SFRP2Q96HF1 295 aa10.83□□□□□ -0.68
CPNE1-228ENST00000498814 JPT2Q9H910 190 aa10.83□□□□□ -0.68
CPNE1-228ENST00000498814 A0A096LPF7 62 aa10.82□□□□□ -0.68
CPNE1-228ENST00000498814 A0A1W2PPQ1 181 aa10.82□□□□□ -0.68
CPNE1-228ENST00000498814 ERVFC1-1P60608 527 aa10.82□□□□□ -0.68
CPNE1-228ENST00000498814 RNF212Q495C1 297 aa10.82□□□□□ -0.68
CPNE1-228ENST00000498814 UFSP1Q6NVU6 142 aa10.82□□□□□ -0.68
CPNE1-228ENST00000498814 NAT8Q9UHE5 227 aa10.82□□□□□ -0.68
CPNE1-228ENST00000498814 VPS13DQ5THJ4 4388 aa10.82□□□□□ -0.68
CPNE1-228ENST00000498814 RYR3Q15413 4870 aa10.81□□□□□ -0.68
CPNE1-228ENST00000498814 IGHV3-73A0A0B4J1V6 119 aa10.81□□□□□ -0.68
CPNE1-228ENST00000498814 TRBV6-4A0A1B0GX49 114 aa10.81□□□□□ -0.68
CPNE1-228ENST00000498814 F2Z2F3 143 aa10.81□□□□□ -0.68
CPNE1-228ENST00000498814 RHODO00212 210 aa10.81□□□□□ -0.68
CPNE1-228ENST00000498814 GATCO43716 136 aaKnown RBP10.81□□□□□ -0.68
CPNE1-228ENST00000498814 SPANXN1Q5VSR9 72 aa10.81□□□□□ -0.68
CPNE1-228ENST00000498814 SAMD10Q9BYL1 202 aa10.81□□□□□ -0.68
CPNE1-228ENST00000498814 OSTCQ9NRP0 149 aa10.81□□□□□ -0.68
CPNE1-228ENST00000498814 ICOSQ9Y6W8 199 aa10.81□□□□□ -0.68
CPNE1-228ENST00000498814 MUC21A0A0G2JKD1 596 aa10.8□□□□□ -0.68
CPNE1-228ENST00000498814 MUC21A0A140T8X8 626 aa10.8□□□□□ -0.68
CPNE1-228ENST00000498814 CRYGDP07320 174 aa10.8□□□□□ -0.68
CPNE1-228ENST00000498814 RPL23P62829 140 aaKnown RBP10.8□□□□□ -0.68
CPNE1-228ENST00000498814 MRPL23Q16540 153 aaKnown RBP10.8□□□□□ -0.68
CPNE1-228ENST00000498814 CT83Q5H943 113 aa10.8□□□□□ -0.68
CPNE1-228ENST00000498814 SLC25A29Q8N8R3 303 aa10.8□□□□□ -0.68
CPNE1-228ENST00000498814 ISOC2Q96AB3 205 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms