RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 ZNF479Q96JC4 524 aa13.87□□□□□ -0.19
HLA-B-255ENST00000498007 TRAV4A0A0B4J268 109 aa13.86□□□□□ -0.19
HLA-B-255ENST00000498007 ARMS2P0C7Q2 107 aa13.86□□□□□ -0.19
HLA-B-255ENST00000498007 OR4C5Q8NGB2 326 aa13.86□□□□□ -0.19
HLA-B-255ENST00000498007 IL36BQ9NZH7 164 aa13.86□□□□□ -0.19
HLA-B-255ENST00000498007 TRGV4A0A0C4DH28 118 aa13.85□□□□□ -0.19
HLA-B-255ENST00000498007 POM121L12Q8N7R1 296 aa13.85□□□□□ -0.19
HLA-B-255ENST00000498007 DAZAP1Q96EP5 407 aaKnown RBP13.85□□□□□ -0.19
HLA-B-255ENST00000498007 MUC4Q99102 2169 aa13.85□□□□□ -0.19
HLA-B-255ENST00000498007 FHL2Q14192 279 aa13.84□□□□□ -0.19
HLA-B-255ENST00000498007 DNLZQ5SXM8 178 aa13.84□□□□□ -0.19
HLA-B-255ENST00000498007 P0DMU3 169 aa13.83□□□□□ -0.2
HLA-B-255ENST00000498007 FAM231AP0DMU4 169 aa13.83□□□□□ -0.2
HLA-B-255ENST00000498007 FAM231CP0DMU5 169 aa13.83□□□□□ -0.2
HLA-B-255ENST00000498007 ZNF575Q86XF7 245 aa13.83□□□□□ -0.2
HLA-B-255ENST00000498007 UBE2DNLQ8IWF7 75 aa13.83□□□□□ -0.2
HLA-B-255ENST00000498007 BIN3Q9NQY0 253 aa13.83□□□□□ -0.2
HLA-B-255ENST00000498007 PHLDA3Q9Y5J5 127 aa13.83□□□□□ -0.2
HLA-B-255ENST00000498007 SRP19P09132 144 aaKnown RBP13.82□□□□□ -0.2
HLA-B-255ENST00000498007 SYT8Q8NBV8 401 aa13.82□□□□□ -0.2
HLA-B-255ENST00000498007 PTH2Q96A98 100 aa13.82□□□□□ -0.2
HLA-B-255ENST00000498007 VSIG2Q96IQ7 327 aa13.82□□□□□ -0.2
HLA-B-255ENST00000498007 SMIM7Q9BQ49 75 aa13.82□□□□□ -0.2
HLA-B-255ENST00000498007 PRO0255Q9UI72 69 aa13.82□□□□□ -0.2
HLA-B-255ENST00000498007 IGHV3-73A0A0B4J1V6 119 aa13.81□□□□□ -0.2
HLA-B-255ENST00000498007 C19orf71A6NCJ1 209 aa13.81□□□□□ -0.2
HLA-B-255ENST00000498007 K7EN84 100 aa13.81□□□□□ -0.2
HLA-B-255ENST00000498007 M0R381 172 aa13.81□□□□□ -0.2
HLA-B-255ENST00000498007 PAX4O43316 350 aa13.81□□□□□ -0.2
HLA-B-255ENST00000498007 P01737 135 aa13.81□□□□□ -0.2
HLA-B-255ENST00000498007 CXCL1P09341 107 aa13.81□□□□□ -0.2
HLA-B-255ENST00000498007 RAB14P61106 215 aa13.81□□□□□ -0.2
HLA-B-255ENST00000498007 CFAP126Q5VTH2 177 aa13.81□□□□□ -0.2
HLA-B-255ENST00000498007 OR2D3Q8NGH3 330 aa13.81□□□□□ -0.2
HLA-B-255ENST00000498007 OCC1Q8TAD7 63 aa13.81□□□□□ -0.2
HLA-B-255ENST00000498007 HHLA3Q9XRX5 114 aa13.81□□□□□ -0.2
HLA-B-255ENST00000498007 NACAE9PAV3 2078 aa13.8□□□□□ -0.2
HLA-B-255ENST00000498007 H3BNG1 76 aa13.8□□□□□ -0.2
HLA-B-255ENST00000498007 RS1O15537 224 aa13.8□□□□□ -0.2
HLA-B-255ENST00000498007 NDUFS6O75380 124 aaKnown RBP13.8□□□□□ -0.2
HLA-B-255ENST00000498007 CRYBA4P53673 196 aa13.8□□□□□ -0.2
HLA-B-255ENST00000498007 SLAQ13239 276 aa13.8□□□□□ -0.2
HLA-B-255ENST00000498007 DMRTA1Q5VZB9 504 aa13.8□□□□□ -0.2
HLA-B-255ENST00000498007 SCRT2Q9NQ03 307 aa13.8□□□□□ -0.2
HLA-B-255ENST00000498007 ZNF727A8MUV8 499 aa13.79□□□□□ -0.2
HLA-B-255ENST00000498007 MED14OSP0DP75 135 aa13.79□□□□□ -0.2
HLA-B-255ENST00000498007 GZMBP10144 247 aa13.79□□□□□ -0.2
HLA-B-255ENST00000498007 SRSF3P84103 164 aaKnown RBP13.79□□□□□ -0.2
HLA-B-255ENST00000498007 KMT2AQ03164 3969 aa13.78□□□□□ -0.2
HLA-B-255ENST00000498007 PEA15Q15121 130 aa13.78□□□□□ -0.2
HLA-B-255ENST00000498007 ZFP82Q8N141 532 aa13.78□□□□□ -0.2
HLA-B-255ENST00000498007 TPPP3Q9BW30 176 aa13.78□□□□□ -0.2
HLA-B-255ENST00000498007 RNASE7Q9H1E1 156 aaKnown RBP13.78□□□□□ -0.2
HLA-B-255ENST00000498007 JPT2Q9H910 190 aa13.78□□□□□ -0.2
HLA-B-255ENST00000498007 MUC21A0A0G2JKD1 596 aa13.77□□□□□ -0.21
HLA-B-255ENST00000498007 MUC21A0A140T8X8 626 aa13.77□□□□□ -0.21
HLA-B-255ENST00000498007 A8MWV9 139 aa13.77□□□□□ -0.21
HLA-B-255ENST00000498007 C9JQL5 133 aa13.77□□□□□ -0.21
HLA-B-255ENST00000498007 RPS20P60866 119 aaKnown RBP13.77□□□□□ -0.21
HLA-B-255ENST00000498007 PIK3CD-AS1Q5SR53 167 aa13.77□□□□□ -0.21
HLA-B-255ENST00000498007 NUDT10Q8NFP7 164 aa13.77□□□□□ -0.21
HLA-B-255ENST00000498007 OR10AG1Q8NH19 301 aa13.77□□□□□ -0.21
HLA-B-255ENST00000498007 NUDT11Q96G61 164 aa13.77□□□□□ -0.21
HLA-B-255ENST00000498007 ICOSQ9Y6W8 199 aa13.77□□□□□ -0.21
HLA-B-255ENST00000498007 DNAH6Q9C0G6 4158 aa13.76□□□□□ -0.21
HLA-B-255ENST00000498007 A0A096LPF7 62 aa13.76□□□□□ -0.21
HLA-B-255ENST00000498007 GATA1P15976 413 aaPredicted RBP13.76□□□□□ -0.21
HLA-B-255ENST00000498007 SSTP61278 116 aa13.76□□□□□ -0.21
HLA-B-255ENST00000498007 XKRY2A2RUG3 117 aa13.75□□□□□ -0.21
HLA-B-255ENST00000498007 SNAI2O43623 268 aa13.75□□□□□ -0.21
HLA-B-255ENST00000498007 CCL18P55774 89 aa13.75□□□□□ -0.21
HLA-B-255ENST00000498007 IFITM2Q01629 132 aa13.75□□□□□ -0.21
HLA-B-255ENST00000498007 FAM74A4Q5TZK3 123 aa13.75□□□□□ -0.21
HLA-B-255ENST00000498007 SPANXN1Q5VSR9 72 aa13.75□□□□□ -0.21
HLA-B-255ENST00000498007 FER1L6-AS1Q8NA97 138 aa13.75□□□□□ -0.21
HLA-B-255ENST00000498007 SAMD10Q9BYL1 202 aa13.75□□□□□ -0.21
HLA-B-255ENST00000498007 RPP21Q9H633 154 aaKnown RBP13.75□□□□□ -0.21
HLA-B-255ENST00000498007 A0A087WWL8 130 aa13.74□□□□□ -0.21
HLA-B-255ENST00000498007 CIDEAO60543 219 aa13.74□□□□□ -0.21
HLA-B-255ENST00000498007 OR5AL1P0C617 328 aa13.74□□□□□ -0.21
HLA-B-255ENST00000498007 GYPEP15421 78 aa13.74□□□□□ -0.21
HLA-B-255ENST00000498007 RNF212Q495C1 297 aa13.74□□□□□ -0.21
HLA-B-255ENST00000498007 LINC01551Q86U37 167 aa13.74□□□□□ -0.21
HLA-B-255ENST00000498007 LY96Q9Y6Y9 160 aa13.74□□□□□ -0.21
HLA-B-255ENST00000498007 LOC100131303A0A0U1RQF7 123 aa13.73□□□□□ -0.21
HLA-B-255ENST00000498007 IGLC6P0CF74 106 aa13.73□□□□□ -0.21
HLA-B-255ENST00000498007 CLLU1Q5K131 121 aa13.73□□□□□ -0.21
HLA-B-255ENST00000498007 SLC25A29Q8N8R3 303 aa13.73□□□□□ -0.21
HLA-B-255ENST00000498007 SFRP2Q96HF1 295 aa13.73□□□□□ -0.21
HLA-B-255ENST00000498007 SSBP4Q9BWG4 385 aaPredicted RBP13.73□□□□□ -0.21
HLA-B-255ENST00000498007 SMDT1Q9H4I9 107 aa13.73□□□□□ -0.21
HLA-B-255ENST00000498007 K7EQD1 137 aa13.72□□□□□ -0.21
HLA-B-255ENST00000498007 RHODO00212 210 aa13.72□□□□□ -0.21
HLA-B-255ENST00000498007 NXPH4O95158 308 aa13.72□□□□□ -0.21
HLA-B-255ENST00000498007 SRIP30626 198 aa13.72□□□□□ -0.21
HLA-B-255ENST00000498007 ERVFC1-1P60608 527 aa13.72□□□□□ -0.21
HLA-B-255ENST00000498007 MRPL23Q16540 153 aaKnown RBP13.72□□□□□ -0.21
HLA-B-255ENST00000498007 FAM74A3Q4VXF1 159 aa13.72□□□□□ -0.21
HLA-B-255ENST00000498007 ZFP2Q6ZN57 461 aa13.72□□□□□ -0.21
HLA-B-255ENST00000498007 LINC00588Q9Y4M8 146 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms