RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 CSPG4Q6UVK1 2322 aa8.18□□□□□ -1.1
TRAPPC12-223ENST00000497597 CFC1BP0CG36 223 aa8.18□□□□□ -1.1
TRAPPC12-223ENST00000497597 CFC1P0CG37 223 aa8.18□□□□□ -1.1
TRAPPC12-223ENST00000497597 RASL10AQ92737 203 aa8.18□□□□□ -1.1
TRAPPC12-223ENST00000497597 RAI1Q7Z5J4 1906 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC12-223ENST00000497597 INS-IGF2F8WCM5 200 aa8.18□□□□□ -1.1
TRAPPC12-223ENST00000497597 BUB1B-PAK6H3BSN5 160 aa8.18□□□□□ -1.1
TRAPPC12-223ENST00000497597 FCN3O75636 299 aa8.18□□□□□ -1.1
TRAPPC12-223ENST00000497597 CEACAM4O75871 244 aa8.18□□□□□ -1.1
TRAPPC12-223ENST00000497597 IGKV3-20P01619 116 aa8.18□□□□□ -1.1
TRAPPC12-223ENST00000497597 IGF1P05019 195 aa8.18□□□□□ -1.1
TRAPPC12-223ENST00000497597 HTN1P15515 57 aa8.18□□□□□ -1.1
TRAPPC12-223ENST00000497597 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.18□□□□□ -1.1
TRAPPC12-223ENST00000497597 OPRPNQ99935 248 aaPredicted RBP8.18□□□□□ -1.1
TRAPPC12-223ENST00000497597 PPDPFQ9H3Y8 114 aa8.18□□□□□ -1.1
TRAPPC12-223ENST00000497597 NBR2O15453 112 aa8.17□□□□□ -1.1
TRAPPC12-223ENST00000497597 HOXB4P17483 251 aaPredicted RBP8.17□□□□□ -1.1
TRAPPC12-223ENST00000497597 PDE6HQ13956 83 aa8.17□□□□□ -1.1
TRAPPC12-223ENST00000497597 TRAV8-3A0A0A6YYJ7 113 aa8.17□□□□□ -1.1
TRAPPC12-223ENST00000497597 RNASE4P34096 147 aaKnown RBP8.17□□□□□ -1.1
TRAPPC12-223ENST00000497597 GATA4P43694 442 aa8.17□□□□□ -1.1
TRAPPC12-223ENST00000497597 FAM57AQ8TBR7 257 aa8.17□□□□□ -1.1
TRAPPC12-223ENST00000497597 RPL13AP40429 203 aaKnown RBP8.17□□□□□ -1.1
TRAPPC12-223ENST00000497597 MRGPRG-AS1Q2M3A8 158 aa8.17□□□□□ -1.1
TRAPPC12-223ENST00000497597 GATD1Q8NB37 220 aa8.17□□□□□ -1.1
TRAPPC12-223ENST00000497597 UBTD1Q9HAC8 227 aa8.17□□□□□ -1.1
TRAPPC12-223ENST00000497597 H3BMM0 161 aa8.16□□□□□ -1.1
TRAPPC12-223ENST00000497597 SRD5A1P18405 259 aa8.16□□□□□ -1.1
TRAPPC12-223ENST00000497597 UBE2WQ96B02 151 aa8.16□□□□□ -1.1
TRAPPC12-223ENST00000497597 ZFHX2Q9C0A1 2572 aaPredicted RBP8.16□□□□□ -1.1
TRAPPC12-223ENST00000497597 WNK1Q9H4A3 2382 aa8.16□□□□□ -1.1
TRAPPC12-223ENST00000497597 PTPRQQ9UMZ3 2332 aa8.16□□□□□ -1.1
TRAPPC12-223ENST00000497597 RHODO00212 210 aa8.16□□□□□ -1.1
TRAPPC12-223ENST00000497597 NRACQ8N912 160 aa8.16□□□□□ -1.1
TRAPPC12-223ENST00000497597 PIFOQ8TCI5 191 aa8.16□□□□□ -1.1
TRAPPC12-223ENST00000497597 DKK4Q9UBT3 224 aa8.16□□□□□ -1.1
TRAPPC12-223ENST00000497597 A0A0J9YY99 117 aa8.16□□□□□ -1.1
TRAPPC12-223ENST00000497597 YAE1D1Q9NRH1 226 aa8.16□□□□□ -1.1
TRAPPC12-223ENST00000497597 ATP5J2P56134 94 aa8.15□□□□□ -1.1
TRAPPC12-223ENST00000497597 C15orf32Q32M92 178 aa8.15□□□□□ -1.1
TRAPPC12-223ENST00000497597 TRBV6-1A0A0K0K1D8 114 aa8.15□□□□□ -1.1
TRAPPC12-223ENST00000497597 J3QQQ9 107 aa8.15□□□□□ -1.1
TRAPPC12-223ENST00000497597 LINC01559Q495D7 138 aa8.15□□□□□ -1.1
TRAPPC12-223ENST00000497597 LINC01620Q4KN68 170 aa8.15□□□□□ -1.1
TRAPPC12-223ENST00000497597 RNASE13Q5GAN3 156 aaKnown RBP8.15□□□□□ -1.1
TRAPPC12-223ENST00000497597 C9orf153Q5TBE3 101 aa8.15□□□□□ -1.1
TRAPPC12-223ENST00000497597 MUSTN1Q8IVN3 82 aa8.15□□□□□ -1.1
TRAPPC12-223ENST00000497597 JPT2Q9H910 190 aa8.15□□□□□ -1.1
TRAPPC12-223ENST00000497597 COL12A1Q99715 3063 aa8.15□□□□□ -1.11
TRAPPC12-223ENST00000497597 F6UB75 175 aa8.15□□□□□ -1.11
TRAPPC12-223ENST00000497597 MRPS12O15235 138 aaKnown RBP8.15□□□□□ -1.11
TRAPPC12-223ENST00000497597 GNRH2O43555 120 aa8.15□□□□□ -1.11
TRAPPC12-223ENST00000497597 PMVKQ15126 192 aa8.15□□□□□ -1.11
TRAPPC12-223ENST00000497597 SEM1Q6ZVN7 128 aa8.15□□□□□ -1.11
TRAPPC12-223ENST00000497597 CLEC2BQ92478 149 aa8.15□□□□□ -1.11
TRAPPC12-223ENST00000497597 SPXQ9BT56 116 aa8.15□□□□□ -1.11
TRAPPC12-223ENST00000497597 SMAD5-AS1Q9Y6J3 95 aa8.15□□□□□ -1.11
TRAPPC12-223ENST00000497597 DCHS2Q6V1P9 2916 aa8.14□□□□□ -1.11
TRAPPC12-223ENST00000497597 ATRXP46100 2492 aa8.14□□□□□ -1.11
TRAPPC12-223ENST00000497597 FAM236AA0A1B0GUQ0 79 aa8.14□□□□□ -1.11
TRAPPC12-223ENST00000497597 FAM236BA0A1B0GV22 79 aa8.14□□□□□ -1.11
TRAPPC12-223ENST00000497597 RBAKDNA6NC62 111 aa8.14□□□□□ -1.11
TRAPPC12-223ENST00000497597 M0QXV9 152 aa8.14□□□□□ -1.11
TRAPPC12-223ENST00000497597 UBE2D1P51668 147 aa8.14□□□□□ -1.11
TRAPPC12-223ENST00000497597 ATXN8Q156A1 80 aa8.14□□□□□ -1.11
TRAPPC12-223ENST00000497597 ASIPP42127 132 aa8.14□□□□□ -1.11
TRAPPC12-223ENST00000497597 TSPEAR-AS2P59090 65 aa8.14□□□□□ -1.11
TRAPPC12-223ENST00000497597 KLRB1Q12918 225 aa8.14□□□□□ -1.11
TRAPPC12-223ENST00000497597 NEXN-AS1Q8NBZ9 246 aa8.14□□□□□ -1.11
TRAPPC12-223ENST00000497597 LINC00477Q96M19 166 aa8.14□□□□□ -1.11
TRAPPC12-223ENST00000497597 IGLV2-18A0A075B6J9 118 aa8.13□□□□□ -1.11
TRAPPC12-223ENST00000497597 TNFRSF13BO14836 293 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC12-223ENST00000497597 CD7P09564 240 aa8.13□□□□□ -1.11
TRAPPC12-223ENST00000497597 UBE2D3P61077 147 aa8.13□□□□□ -1.11
TRAPPC12-223ENST00000497597 UBE2D2P62837 147 aa8.13□□□□□ -1.11
TRAPPC12-223ENST00000497597 ELANEP08246 267 aa8.13□□□□□ -1.11
TRAPPC12-223ENST00000497597 Q6ZSV7 163 aa8.13□□□□□ -1.11
TRAPPC12-223ENST00000497597 DEFB123Q8N688 67 aa8.13□□□□□ -1.11
TRAPPC12-223ENST00000497597 DPM3Q9P2X0 92 aa8.13□□□□□ -1.11
TRAPPC12-223ENST00000497597 CEP295Q9C0D2 2601 aa8.13□□□□□ -1.11
TRAPPC12-223ENST00000497597 ANKRD11Q6UB99 2663 aaPredicted RBP8.13□□□□□ -1.11
TRAPPC12-223ENST00000497597 COX6CP09669 75 aa8.13□□□□□ -1.11
TRAPPC12-223ENST00000497597 LINC00311Q8N616 119 aa8.13□□□□□ -1.11
TRAPPC12-223ENST00000497597 OR10J6PQ8NGY7 276 aa8.13□□□□□ -1.11
TRAPPC12-223ENST00000497597 RNASE6Q93091 150 aaKnown RBP8.13□□□□□ -1.11
TRAPPC12-223ENST00000497597 FANCD2OSQ96PS1 177 aa8.13□□□□□ -1.11
TRAPPC12-223ENST00000497597 DPH3P1Q9H4G8 78 aa8.13□□□□□ -1.11
TRAPPC12-223ENST00000497597 LOC107984640A0A0U1RRK4 108 aa8.12□□□□□ -1.11
TRAPPC12-223ENST00000497597 IGHG3P01860 377 aa8.12□□□□□ -1.11
TRAPPC12-223ENST00000497597 ASCL5Q7RTU5 278 aa8.12□□□□□ -1.11
TRAPPC12-223ENST00000497597 SLC50A1Q9BRV3 221 aa8.12□□□□□ -1.11
TRAPPC12-223ENST00000497597 KLK5Q9Y337 293 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC12-223ENST00000497597 CTSGP08311 255 aa8.12□□□□□ -1.11
TRAPPC12-223ENST00000497597 METTL26Q96S19 204 aa8.12□□□□□ -1.11
TRAPPC12-223ENST00000497597 LINC00574Q9H8X3 128 aa8.12□□□□□ -1.11
TRAPPC12-223ENST00000497597 DAND5Q8N907 189 aa8.12□□□□□ -1.11
TRAPPC12-223ENST00000497597 EEF1AKMT3Q96AZ1 226 aa8.12□□□□□ -1.11
TRAPPC12-223ENST00000497597 ZNF625Q96I27 306 aaPredicted RBP8.12□□□□□ -1.11
TRAPPC12-223ENST00000497597 G3V318 75 aa8.11□□□□□ -1.11
TRAPPC12-223ENST00000497597 TOMM6Q96B49 74 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms