RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 FXYD6-FXYD2A0A087WZ82 144 aa7.8□□□□□ -1.16
VTI1A-208ENST00000494728 IGHV3-38A0A0C4DH36 116 aa7.8□□□□□ -1.16
VTI1A-208ENST00000494728 LRCOL1A6NCL2 159 aa7.8□□□□□ -1.16
VTI1A-208ENST00000494728 LINC00694P0DN24 101 aa7.8□□□□□ -1.16
VTI1A-208ENST00000494728 PPT1P50897 306 aa7.8□□□□□ -1.16
VTI1A-208ENST00000494728 FGF8P55075 233 aaPredicted RBP7.8□□□□□ -1.16
VTI1A-208ENST00000494728 TIRAPP58753 221 aa7.8□□□□□ -1.16
VTI1A-208ENST00000494728 UBE2G2P60604 165 aa7.8□□□□□ -1.16
VTI1A-208ENST00000494728 SMUG1Q53HV7 270 aa7.8□□□□□ -1.16
VTI1A-208ENST00000494728 LINC01556Q5JQF7 62 aa7.8□□□□□ -1.16
VTI1A-208ENST00000494728 CDPF1Q6NVV7 123 aa7.8□□□□□ -1.16
VTI1A-208ENST00000494728 Q86TA4 180 aa7.8□□□□□ -1.16
VTI1A-208ENST00000494728 ACTR3CQ9C0K3 210 aaPredicted RBP7.8□□□□□ -1.16
VTI1A-208ENST00000494728 JPT2Q9H910 190 aa7.8□□□□□ -1.16
VTI1A-208ENST00000494728 TMEM167BQ9NRX6 74 aa7.8□□□□□ -1.16
VTI1A-208ENST00000494728 PGPEP1Q9NXJ5 209 aa7.8□□□□□ -1.16
VTI1A-208ENST00000494728 ARL2-SNX15V9GYD0 113 aa7.8□□□□□ -1.16
VTI1A-208ENST00000494728 TRAV9-2A0A087WT02 112 aa7.79□□□□□ -1.16
VTI1A-208ENST00000494728 TRBV6-4A0A1B0GX49 114 aa7.79□□□□□ -1.16
VTI1A-208ENST00000494728 TAAR5O14804 337 aa7.79□□□□□ -1.16
VTI1A-208ENST00000494728 MBP02144 154 aa7.79□□□□□ -1.16
VTI1A-208ENST00000494728 RHOHQ15669 191 aa7.79□□□□□ -1.16
VTI1A-208ENST00000494728 PARLQ9H300 379 aa7.79□□□□□ -1.16
VTI1A-208ENST00000494728 CTXND1A0A1B0GTU2 59 aa7.78□□□□□ -1.16
VTI1A-208ENST00000494728 A0A1W2PRE2 83 aa7.78□□□□□ -1.16
VTI1A-208ENST00000494728 FAM74A7A6NL05 159 aa7.78□□□□□ -1.16
VTI1A-208ENST00000494728 K7EP13 123 aa7.78□□□□□ -1.16
VTI1A-208ENST00000494728 K7EQM0 130 aa7.78□□□□□ -1.16
VTI1A-208ENST00000494728 EREGO14944 169 aa7.78□□□□□ -1.16
VTI1A-208ENST00000494728 IGHV3-30P01768 117 aa7.78□□□□□ -1.16
VTI1A-208ENST00000494728 IGHV3-33P01772 117 aa7.78□□□□□ -1.16
VTI1A-208ENST00000494728 IGHV3-30-3P0DP02 117 aa7.78□□□□□ -1.16
VTI1A-208ENST00000494728 IGHV3-30-5P0DP03 117 aa7.78□□□□□ -1.16
VTI1A-208ENST00000494728 CRIP1P50238 77 aa7.78□□□□□ -1.16
VTI1A-208ENST00000494728 WFDC2Q14508 124 aa7.78□□□□□ -1.16
VTI1A-208ENST00000494728 ZFP69Q49AA0 526 aa7.78□□□□□ -1.16
VTI1A-208ENST00000494728 UFSP1Q6NVU6 142 aa7.78□□□□□ -1.16
VTI1A-208ENST00000494728 OR2T35Q8NGX2 323 aa7.78□□□□□ -1.16
VTI1A-208ENST00000494728 ZC2HC1AQ96GY0 325 aa7.78□□□□□ -1.16
VTI1A-208ENST00000494728 SAMD10Q9BYL1 202 aa7.78□□□□□ -1.16
VTI1A-208ENST00000494728 Q9HAA7 133 aa7.78□□□□□ -1.16
VTI1A-208ENST00000494728 CYTL1Q9NRR1 136 aa7.78□□□□□ -1.16
VTI1A-208ENST00000494728 IBA57-AS1B1ANH7 110 aa7.77□□□□□ -1.17
VTI1A-208ENST00000494728 H3BVH4 76 aa7.77□□□□□ -1.17
VTI1A-208ENST00000494728 PEX7O00628 323 aa7.77□□□□□ -1.17
VTI1A-208ENST00000494728 OR10J3Q5JRS4 329 aa7.77□□□□□ -1.17
VTI1A-208ENST00000494728 SH2D6Q7Z4S9 175 aa7.77□□□□□ -1.17
VTI1A-208ENST00000494728 C10orf126Q8N4M7 172 aa7.77□□□□□ -1.17
VTI1A-208ENST00000494728 INO80EQ8NBZ0 244 aaPredicted RBP7.77□□□□□ -1.17
VTI1A-208ENST00000494728 PTH2Q96A98 100 aa7.77□□□□□ -1.17
VTI1A-208ENST00000494728 PRADC1Q9BSG0 188 aa7.77□□□□□ -1.17
VTI1A-208ENST00000494728 EPM2AB3EWF7 344 aa7.76□□□□□ -1.17
VTI1A-208ENST00000494728 SMLR1H3BR10 107 aa7.76□□□□□ -1.17
VTI1A-208ENST00000494728 M0R036 132 aa7.76□□□□□ -1.17
VTI1A-208ENST00000494728 FHITP49789 147 aa7.76□□□□□ -1.17
VTI1A-208ENST00000494728 SAPCD1Q5SSQ6 148 aa7.76□□□□□ -1.17
VTI1A-208ENST00000494728 LELP1Q5T871 98 aa7.76□□□□□ -1.17
VTI1A-208ENST00000494728 Q5VSD8 79 aa7.76□□□□□ -1.17
VTI1A-208ENST00000494728 C14orf178Q8N769 122 aaPredicted RBP7.76□□□□□ -1.17
VTI1A-208ENST00000494728 GTSF1LQ9H1H1 148 aa7.76□□□□□ -1.17
VTI1A-208ENST00000494728 MAP1LC3B2A6NCE7 125 aa7.75□□□□□ -1.17
VTI1A-208ENST00000494728 GAGE12JA6NER3 117 aa7.75□□□□□ -1.17
VTI1A-208ENST00000494728 ARPC5O15511 151 aa7.75□□□□□ -1.17
VTI1A-208ENST00000494728 SH2D1AO60880 128 aa7.75□□□□□ -1.17
VTI1A-208ENST00000494728 IFNA7P01567 189 aa7.75□□□□□ -1.17
VTI1A-208ENST00000494728 SMR3BP02814 79 aaPredicted RBP7.75□□□□□ -1.17
VTI1A-208ENST00000494728 MGST1P10620 155 aaKnown RBP7.75□□□□□ -1.17
VTI1A-208ENST00000494728 GCSHP23434 173 aa7.75□□□□□ -1.17
VTI1A-208ENST00000494728 ASIPP42127 132 aa7.75□□□□□ -1.17
VTI1A-208ENST00000494728 GAGE1Q13065 139 aa7.75□□□□□ -1.17
VTI1A-208ENST00000494728 GAGE4Q13068 117 aa7.75□□□□□ -1.17
VTI1A-208ENST00000494728 GAGE5Q13069 117 aa7.75□□□□□ -1.17
VTI1A-208ENST00000494728 GAGE13Q4V321 117 aa7.75□□□□□ -1.17
VTI1A-208ENST00000494728 ATP6V0E2Q8NHE4 81 aa7.75□□□□□ -1.17
VTI1A-208ENST00000494728 MAP1LC3BQ9GZQ8 125 aa7.75□□□□□ -1.17
VTI1A-208ENST00000494728 IL36BQ9NZH7 164 aa7.75□□□□□ -1.17
VTI1A-208ENST00000494728 IGLV5-52A0A0A0MRZ9 124 aa7.74□□□□□ -1.17
VTI1A-208ENST00000494728 BORCS7-ASMTA0A0B4J1R7 106 aa7.74□□□□□ -1.17
VTI1A-208ENST00000494728 TRAV8-6A0A0B4J262 113 aa7.74□□□□□ -1.17
VTI1A-208ENST00000494728 GRIFINA4D1Z8 144 aa7.74□□□□□ -1.17
VTI1A-208ENST00000494728 KRBOX1C9JBD0 128 aa7.74□□□□□ -1.17
VTI1A-208ENST00000494728 PSCAO43653 123 aa7.74□□□□□ -1.17
VTI1A-208ENST00000494728 CIDEAO60543 219 aa7.74□□□□□ -1.17
VTI1A-208ENST00000494728 LGALSLQ3ZCW2 172 aaPredicted RBP7.74□□□□□ -1.17
VTI1A-208ENST00000494728 ZFP2Q6ZN57 461 aa7.74□□□□□ -1.17
VTI1A-208ENST00000494728 Q8N814 137 aa7.74□□□□□ -1.17
VTI1A-208ENST00000494728 DNAJC30Q96LL9 226 aa7.74□□□□□ -1.17
VTI1A-208ENST00000494728 FAM30AQ9NZY2 134 aa7.74□□□□□ -1.17
VTI1A-208ENST00000494728 TMSB15BA0A087X1C1 80 aa7.73□□□□□ -1.17
VTI1A-208ENST00000494728 FABP5P3A8MUU1 101 aa7.73□□□□□ -1.17
VTI1A-208ENST00000494728 A8MWV9 139 aa7.73□□□□□ -1.17
VTI1A-208ENST00000494728 B4DEV8 164 aa7.73□□□□□ -1.17
VTI1A-208ENST00000494728 ARMS2P0C7Q2 107 aa7.73□□□□□ -1.17
VTI1A-208ENST00000494728 S100A4P26447 101 aaKnown RBP7.73□□□□□ -1.17
VTI1A-208ENST00000494728 AKR1C8PQ5T2L2 129 aa7.73□□□□□ -1.17
VTI1A-208ENST00000494728 COX8CQ7Z4L0 72 aa7.73□□□□□ -1.17
VTI1A-208ENST00000494728 DAZ4Q86SG3 579 aaKnown RBP7.73□□□□□ -1.17
VTI1A-208ENST00000494728 DAZ3Q9NR90 486 aaKnown RBP7.73□□□□□ -1.17
VTI1A-208ENST00000494728 LRP1Q07954 4544 aaKnown RBP7.72□□□□□ -1.17
VTI1A-208ENST00000494728 A0A087WWL8 130 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms