RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 ICOSQ9Y6W8 199 aa14.91□□□□□ -0.02
COL27A1-207ENST00000494090 TMEM89A2RUT3 159 aa14.91□□□□□ -0.02
COL27A1-207ENST00000494090 LINC01545Q5VT33 79 aa14.9□□□□□ -0.02
COL27A1-207ENST00000494090 PIFOQ8TCI5 191 aa14.9□□□□□ -0.02
COL27A1-207ENST00000494090 DEFB125Q8N687 156 aa14.9□□□□□ -0.02
COL27A1-207ENST00000494090 A0A0J9YY99 117 aa14.9□□□□□ -0.02
COL27A1-207ENST00000494090 CTSGP08311 255 aa14.9□□□□□ -0.02
COL27A1-207ENST00000494090 XCL1P47992 114 aa14.9□□□□□ -0.02
COL27A1-207ENST00000494090 NOTCH3Q9UM47 2321 aa14.9□□□□□ -0.02
COL27A1-207ENST00000494090 PCP2Q8IVA1 136 aa14.89□□□□□ -0.03
COL27A1-207ENST00000494090 AJUBAQ96IF1 538 aa14.89□□□□□ -0.03
COL27A1-207ENST00000494090 MALRD1Q5VYJ5 2156 aa14.89□□□□□ -0.03
COL27A1-207ENST00000494090 IGHV4-38-2P0DP08 117 aa14.89□□□□□ -0.03
COL27A1-207ENST00000494090 GATA1P15976 413 aaPredicted RBP14.89□□□□□ -0.03
COL27A1-207ENST00000494090 C11orf1Q9H5F2 150 aa14.89□□□□□ -0.03
COL27A1-207ENST00000494090 CCL18P55774 89 aa14.89□□□□□ -0.03
COL27A1-207ENST00000494090 IGLV2-23P01705 113 aa14.88□□□□□ -0.03
COL27A1-207ENST00000494090 CARD19Q96LW7 228 aa14.88□□□□□ -0.03
COL27A1-207ENST00000494090 PRSS47A8MTI9 375 aa14.88□□□□□ -0.03
COL27A1-207ENST00000494090 C16orf54Q6UWD8 224 aa14.88□□□□□ -0.03
COL27A1-207ENST00000494090 C9orf153Q5TBE3 101 aa14.88□□□□□ -0.03
COL27A1-207ENST00000494090 K7EMT4 169 aa14.88□□□□□ -0.03
COL27A1-207ENST00000494090 SLURP1P55000 103 aa14.88□□□□□ -0.03
COL27A1-207ENST00000494090 GTF3C1Q12789 2109 aa14.88□□□□□ -0.03
COL27A1-207ENST00000494090 DAZ2Q13117 558 aaKnown RBP14.88□□□□□ -0.03
COL27A1-207ENST00000494090 CLPSL2Q6UWE3 100 aa14.88□□□□□ -0.03
COL27A1-207ENST00000494090 DAZ4Q86SG3 579 aaKnown RBP14.88□□□□□ -0.03
COL27A1-207ENST00000494090 DAZ3Q9NR90 486 aaKnown RBP14.88□□□□□ -0.03
COL27A1-207ENST00000494090 KMT2EQ8IZD2 1858 aa14.88□□□□□ -0.03
COL27A1-207ENST00000494090 DEFB136Q30KP8 78 aa14.87□□□□□ -0.03
COL27A1-207ENST00000494090 GAGE12HA6NDE8 117 aa14.87□□□□□ -0.03
COL27A1-207ENST00000494090 SPRY4Q9C004 299 aa14.87□□□□□ -0.03
COL27A1-207ENST00000494090 WI2-2373I1.2A0A1W2PRP0 233 aa14.87□□□□□ -0.03
COL27A1-207ENST00000494090 ATP6V0E2Q8NHE4 81 aa14.87□□□□□ -0.03
COL27A1-207ENST00000494090 IGHG4P01861 327 aa14.87□□□□□ -0.03
COL27A1-207ENST00000494090 K7EQD1 137 aa14.86□□□□□ -0.03
COL27A1-207ENST00000494090 IFITM1P13164 125 aa14.86□□□□□ -0.03
COL27A1-207ENST00000494090 SHANK1Q9Y566 2161 aa14.86□□□□□ -0.03
COL27A1-207ENST00000494090 AMTNQ6UX39 209 aa14.86□□□□□ -0.03
COL27A1-207ENST00000494090 ODF3L1Q8IXM7 274 aa14.86□□□□□ -0.03
COL27A1-207ENST00000494090 RNASE13Q5GAN3 156 aaKnown RBP14.86□□□□□ -0.03
COL27A1-207ENST00000494090 BUB3O43684 328 aa14.86□□□□□ -0.03
COL27A1-207ENST00000494090 Q9H8V8 135 aa14.85□□□□□ -0.03
COL27A1-207ENST00000494090 CFC1BP0CG36 223 aa14.85□□□□□ -0.03
COL27A1-207ENST00000494090 CFC1P0CG37 223 aa14.85□□□□□ -0.03
COL27A1-207ENST00000494090 MYCNOSP40205 109 aa14.85□□□□□ -0.03
COL27A1-207ENST00000494090 MRAPQ8TCY5 172 aa14.85□□□□□ -0.03
COL27A1-207ENST00000494090 C5orf56Q8N8D9 126 aa14.85□□□□□ -0.03
COL27A1-207ENST00000494090 TEX22C9J3V5 150 aa14.85□□□□□ -0.03
COL27A1-207ENST00000494090 ADORA2A-AS1P86434 159 aa14.85□□□□□ -0.03
COL27A1-207ENST00000494090 GTSF1Q8WW33 167 aa14.85□□□□□ -0.03
COL27A1-207ENST00000494090 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.85□□□□□ -0.03
COL27A1-207ENST00000494090 IGKV2-29A2NJV5 120 aaPredicted RBP14.85□□□□□ -0.03
COL27A1-207ENST00000494090 LINC00173Q6ZV60 143 aa14.84□□□□□ -0.03
COL27A1-207ENST00000494090 Q8N9W7 124 aa14.84□□□□□ -0.03
COL27A1-207ENST00000494090 GYPEP15421 78 aa14.84□□□□□ -0.03
COL27A1-207ENST00000494090 EML6Q6ZMW3 1958 aa14.84□□□□□ -0.03
COL27A1-207ENST00000494090 CRYGCP07315 174 aa14.84□□□□□ -0.03
COL27A1-207ENST00000494090 APRG1Q8IVJ8 170 aa14.84□□□□□ -0.03
COL27A1-207ENST00000494090 Q6ZQT7 251 aa14.84□□□□□ -0.03
COL27A1-207ENST00000494090 BLCAPP62952 87 aa14.83□□□□□ -0.03
COL27A1-207ENST00000494090 CITED1Q99966 193 aa14.83□□□□□ -0.03
COL27A1-207ENST00000494090 MSRB1Q9NZV6 116 aa14.83□□□□□ -0.03
COL27A1-207ENST00000494090 SEM1Q6ZVN7 128 aa14.83□□□□□ -0.04
COL27A1-207ENST00000494090 IGLV1-47P01700 117 aa14.83□□□□□ -0.04
COL27A1-207ENST00000494090 RPL39LQ96EH5 51 aaKnown RBP14.83□□□□□ -0.04
COL27A1-207ENST00000494090 ORMDL1Q9P0S3 153 aa14.82□□□□□ -0.04
COL27A1-207ENST00000494090 TDRG1Q3Y452 100 aa14.82□□□□□ -0.04
COL27A1-207ENST00000494090 CAMK2N2Q96S95 79 aa14.82□□□□□ -0.04
COL27A1-207ENST00000494090 Q9HAA7 133 aa14.82□□□□□ -0.04
COL27A1-207ENST00000494090 PCNX1Q96RV3 2341 aa14.82□□□□□ -0.04
COL27A1-207ENST00000494090 ETDCA0A1B0GVM5 59 aa14.82□□□□□ -0.04
COL27A1-207ENST00000494090 FBXL19-AS1Q494R0 122 aa14.82□□□□□ -0.04
COL27A1-207ENST00000494090 KIF26AQ9ULI4 1882 aaPredicted RBP14.82□□□□□ -0.04
COL27A1-207ENST00000494090 CCL25O15444 150 aa14.81□□□□□ -0.04
COL27A1-207ENST00000494090 ANKRD39Q53RE8 183 aa14.81□□□□□ -0.04
COL27A1-207ENST00000494090 TRBV6-1A0A0K0K1D8 114 aa14.81□□□□□ -0.04
COL27A1-207ENST00000494090 Q6ZVH6 145 aa14.81□□□□□ -0.04
COL27A1-207ENST00000494090 GPHB5Q86YW7 130 aa14.81□□□□□ -0.04
COL27A1-207ENST00000494090 SPRY2O43597 315 aa14.81□□□□□ -0.04
COL27A1-207ENST00000494090 COX7A2LO14548 114 aa14.81□□□□□ -0.04
COL27A1-207ENST00000494090 H3BQ85 93 aa14.8□□□□□ -0.04
COL27A1-207ENST00000494090 MED14OSP0DP75 135 aa14.8□□□□□ -0.04
COL27A1-207ENST00000494090 ZFP2Q6ZN57 461 aa14.79□□□□□ -0.04
COL27A1-207ENST00000494090 A0A1W2PNU3 283 aaPredicted RBP14.79□□□□□ -0.04
COL27A1-207ENST00000494090 P0C879 139 aa14.79□□□□□ -0.04
COL27A1-207ENST00000494090 C9orf47Q6ZRZ4 202 aa14.79□□□□□ -0.04
COL27A1-207ENST00000494090 TRAV4A0A0B4J268 109 aa14.79□□□□□ -0.04
COL27A1-207ENST00000494090 C2orf70A6NJV1 201 aa14.79□□□□□ -0.04
COL27A1-207ENST00000494090 NTN5Q8WTR8 489 aaPredicted RBP14.79□□□□□ -0.04
COL27A1-207ENST00000494090 IGLL5B9A064 214 aa14.79□□□□□ -0.04
COL27A1-207ENST00000494090 H0YGX0 51 aa14.79□□□□□ -0.04
COL27A1-207ENST00000494090 C5orf38Q86SI9 138 aa14.79□□□□□ -0.04
COL27A1-207ENST00000494090 hADV29S1A0JD25 119 aa14.79□□□□□ -0.04
COL27A1-207ENST00000494090 ZNF503Q96F45 646 aa14.79□□□□□ -0.04
COL27A1-207ENST00000494090 E7EUB6 86 aa14.78□□□□□ -0.04
COL27A1-207ENST00000494090 FUSP35637 526 aaKnown RBP eCLIP14.78□□□□□ -0.04
COL27A1-207ENST00000494090 IGHV4OR15-8A0A075B7B6 117 aa14.78□□□□□ -0.04
COL27A1-207ENST00000494090 A0A087WW49 117 aa14.78□□□□□ -0.04
COL27A1-207ENST00000494090 MRPL36Q9P0J6 103 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms