RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 TRGV2A0A075B6R0 118 aa10.71□□□□□ -0.69
ACTB-213ENST00000493945 DEFB4AO15263 64 aa10.71□□□□□ -0.69
ACTB-213ENST00000493945 ARMS2P0C7Q2 107 aa10.71□□□□□ -0.69
ACTB-213ENST00000493945 C10orf91Q5T1B1 145 aa10.71□□□□□ -0.69
ACTB-213ENST00000493945 NBEAL2Q6ZNJ1 2754 aa10.71□□□□□ -0.69
ACTB-213ENST00000493945 PTH2Q96A98 100 aa10.71□□□□□ -0.69
ACTB-213ENST00000493945 C9orf85Q96MD7 179 aa10.71□□□□□ -0.69
ACTB-213ENST00000493945 MDFICQ9P1T7 246 aa10.71□□□□□ -0.69
ACTB-213ENST00000493945 CIDEAO60543 219 aa10.7□□□□□ -0.7
ACTB-213ENST00000493945 KCNIP4Q6PIL6 250 aa10.7□□□□□ -0.7
ACTB-213ENST00000493945 SMIM15Q7Z3B0 74 aa10.7□□□□□ -0.7
ACTB-213ENST00000493945 NAT8BQ9UHF3 227 aa10.7□□□□□ -0.7
ACTB-213ENST00000493945 A8MWV9 139 aa10.69□□□□□ -0.7
ACTB-213ENST00000493945 SNAI2O43623 268 aa10.69□□□□□ -0.7
ACTB-213ENST00000493945 SPINK4O60575 86 aa10.69□□□□□ -0.7
ACTB-213ENST00000493945 RNASE3P12724 160 aaKnown RBP10.69□□□□□ -0.7
ACTB-213ENST00000493945 S100PP25815 95 aa10.69□□□□□ -0.7
ACTB-213ENST00000493945 RNF212Q495C1 297 aa10.69□□□□□ -0.7
ACTB-213ENST00000493945 ZNF876PQ49A33 203 aa10.69□□□□□ -0.7
ACTB-213ENST00000493945 SLC7A5P1Q8MH63 180 aa10.69□□□□□ -0.7
ACTB-213ENST00000493945 RASL10AQ92737 203 aa10.69□□□□□ -0.7
ACTB-213ENST00000493945 V9GYV3 84 aa10.69□□□□□ -0.7
ACTB-213ENST00000493945 PLAC8L1A1L4L8 177 aa10.68□□□□□ -0.7
ACTB-213ENST00000493945 RHODO00212 210 aa10.68□□□□□ -0.7
ACTB-213ENST00000493945 PRM2P04554 102 aa10.68□□□□□ -0.7
ACTB-213ENST00000493945 S100A8P05109 93 aa10.68□□□□□ -0.7
ACTB-213ENST00000493945 TRGC1P0CF51 173 aa10.68□□□□□ -0.7
ACTB-213ENST00000493945 SMIM17P0DL12 118 aa10.68□□□□□ -0.7
ACTB-213ENST00000493945 DEFB130BP0DP73 79 aa10.68□□□□□ -0.7
ACTB-213ENST00000493945 DEFB130AP0DP74 79 aa10.68□□□□□ -0.7
ACTB-213ENST00000493945 CTRLP40313 264 aa10.68□□□□□ -0.7
ACTB-213ENST00000493945 WDR73Q6P4I2 378 aa10.68□□□□□ -0.7
ACTB-213ENST00000493945 CLRN3Q8NCR9 226 aa10.68□□□□□ -0.7
ACTB-213ENST00000493945 AP1S3Q96PC3 154 aa10.68□□□□□ -0.7
ACTB-213ENST00000493945 A0A087WWC5 75 aa10.67□□□□□ -0.7
ACTB-213ENST00000493945 GAGE12BA1L429 117 aa10.67□□□□□ -0.7
ACTB-213ENST00000493945 HIGD1CA8MV81 97 aa10.67□□□□□ -0.7
ACTB-213ENST00000493945 M0R381 172 aa10.67□□□□□ -0.7
ACTB-213ENST00000493945 GAGE7O76087 117 aa10.67□□□□□ -0.7
ACTB-213ENST00000493945 ATP5G1P05496 136 aa10.67□□□□□ -0.7
ACTB-213ENST00000493945 IGLC6P0CF74 106 aa10.67□□□□□ -0.7
ACTB-213ENST00000493945 GAGE12FP0CL80 117 aa10.67□□□□□ -0.7
ACTB-213ENST00000493945 GAGE12GP0CL81 117 aa10.67□□□□□ -0.7
ACTB-213ENST00000493945 GAGE12IP0CL82 117 aa10.67□□□□□ -0.7
ACTB-213ENST00000493945 BTF3L4Q96K17 158 aa10.67□□□□□ -0.7
ACTB-213ENST00000493945 C18orf15Q96N68 181 aa10.67□□□□□ -0.7
ACTB-213ENST00000493945 IMMP2LQ96T52 175 aa10.67□□□□□ -0.7
ACTB-213ENST00000493945 SSBP4Q9BWG4 385 aaPredicted RBP10.67□□□□□ -0.7
ACTB-213ENST00000493945 SCRT2Q9NQ03 307 aa10.67□□□□□ -0.7
ACTB-213ENST00000493945 TMEM242Q9NWH2 141 aa10.67□□□□□ -0.7
ACTB-213ENST00000493945 MRPL16Q9NX20 251 aaKnown RBP10.67□□□□□ -0.7
ACTB-213ENST00000493945 TRAV4A0A0B4J268 109 aa10.66□□□□□ -0.7
ACTB-213ENST00000493945 A0A1B0GW15 77 aa10.66□□□□□ -0.7
ACTB-213ENST00000493945 GZMBP10144 247 aa10.66□□□□□ -0.7
ACTB-213ENST00000493945 RIGQ13278 110 aa10.66□□□□□ -0.7
ACTB-213ENST00000493945 Q6ZTI0 123 aa10.66□□□□□ -0.7
ACTB-213ENST00000493945 OR4C5Q8NGB2 326 aa10.66□□□□□ -0.7
ACTB-213ENST00000493945 RPS10P5Q9NQ39 176 aa10.66□□□□□ -0.7
ACTB-213ENST00000493945 A0A1B0GUT8 65 aa10.65□□□□□ -0.7
ACTB-213ENST00000493945 SMIM27A0A1W2PRY6 76 aa10.65□□□□□ -0.7
ACTB-213ENST00000493945 FOXA3P55318 350 aaPredicted RBP10.65□□□□□ -0.7
ACTB-213ENST00000493945 SLAQ13239 276 aa10.65□□□□□ -0.7
ACTB-213ENST00000493945 LYZL1Q6UWQ5 148 aa10.65□□□□□ -0.7
ACTB-213ENST00000493945 LINC00612Q8N6U2 182 aa10.65□□□□□ -0.7
ACTB-213ENST00000493945 WWC2-AS2Q96NR7 200 aa10.65□□□□□ -0.7
ACTB-213ENST00000493945 EDA2RQ9HAV5 297 aa10.65□□□□□ -0.7
ACTB-213ENST00000493945 TRAV9-1A0A075B6T8 112 aa10.64□□□□□ -0.71
ACTB-213ENST00000493945 TRAV10A0A0B4J240 114 aa10.64□□□□□ -0.71
ACTB-213ENST00000493945 C7orf77A4D0Y5 90 aa10.64□□□□□ -0.71
ACTB-213ENST00000493945 NXPH4O95158 308 aa10.64□□□□□ -0.71
ACTB-213ENST00000493945 TWIST1Q15672 202 aa10.64□□□□□ -0.71
ACTB-213ENST00000493945 OR10AG1Q8NH19 301 aa10.64□□□□□ -0.71
ACTB-213ENST00000493945 PGLYRP4Q96LB8 373 aa10.64□□□□□ -0.71
ACTB-213ENST00000493945 CNFNQ9BYD5 112 aa10.64□□□□□ -0.71
ACTB-213ENST00000493945 CELA1Q9UNI1 258 aa10.64□□□□□ -0.71
ACTB-213ENST00000493945 PRKDCP78527 4128 aaKnown RBP10.64□□□□□ -0.71
ACTB-213ENST00000493945 IGHV4-4A0A075B6R2 117 aa10.63□□□□□ -0.71
ACTB-213ENST00000493945 ATP5L2Q7Z4Y8 100 aa10.63□□□□□ -0.71
ACTB-213ENST00000493945 GTSF1Q8WW33 167 aa10.63□□□□□ -0.71
ACTB-213ENST00000493945 TRGV4A0A0C4DH28 118 aa10.62□□□□□ -0.71
ACTB-213ENST00000493945 NUPR2A6NF83 97 aa10.62□□□□□ -0.71
ACTB-213ENST00000493945 S100A1P23297 94 aa10.62□□□□□ -0.71
ACTB-213ENST00000493945 NANOS2P60321 138 aaKnown RBP10.62□□□□□ -0.71
ACTB-213ENST00000493945 C12orf74Q32Q52 190 aa10.62□□□□□ -0.71
ACTB-213ENST00000493945 ZFP2Q6ZN57 461 aa10.62□□□□□ -0.71
ACTB-213ENST00000493945 NUP35Q8NFH5 326 aa10.62□□□□□ -0.71
ACTB-213ENST00000493945 TENM3Q9P273 2699 aa10.62□□□□□ -0.71
ACTB-213ENST00000493945 MUC4Q99102 2169 aa10.61□□□□□ -0.71
ACTB-213ENST00000493945 HTN3P15516 51 aa10.61□□□□□ -0.71
ACTB-213ENST00000493945 NTF3P20783 257 aa10.61□□□□□ -0.71
ACTB-213ENST00000493945 DMRTA1Q5VZB9 504 aa10.61□□□□□ -0.71
ACTB-213ENST00000493945 FAM210BQ96KR6 192 aa10.61□□□□□ -0.71
ACTB-213ENST00000493945 KLK5Q9Y337 293 aaPredicted RBP10.61□□□□□ -0.71
ACTB-213ENST00000493945 STAB2Q8WWQ8 2551 aa10.6□□□□□ -0.71
ACTB-213ENST00000493945 DEFB131BA0A096LNP1 70 aa10.6□□□□□ -0.71
ACTB-213ENST00000493945 F5H768 121 aa10.6□□□□□ -0.71
ACTB-213ENST00000493945 RS1O15537 224 aa10.6□□□□□ -0.71
ACTB-213ENST00000493945 HBBP68871 147 aa10.6□□□□□ -0.71
ACTB-213ENST00000493945 FAM74A4Q5TZK3 123 aa10.6□□□□□ -0.71
ACTB-213ENST00000493945 Q6ZTC4 211 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms