RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 B5MCH6 92 aa8.77□□□□□ -1.01
UPF3A-210ENST00000493727 CRXO43186 299 aaPredicted RBP8.77□□□□□ -1.01
UPF3A-210ENST00000493727 P01737 135 aa8.77□□□□□ -1.01
UPF3A-210ENST00000493727 ORM1P02763 201 aa8.77□□□□□ -1.01
UPF3A-210ENST00000493727 Q6AWC8 147 aa8.77□□□□□ -1.01
UPF3A-210ENST00000493727 CEMP1Q6PRD7 247 aaPredicted RBP8.77□□□□□ -1.01
UPF3A-210ENST00000493727 C15orf54Q8N8G6 183 aa8.77□□□□□ -1.01
UPF3A-210ENST00000493727 ISOC2Q96AB3 205 aa8.77□□□□□ -1.01
UPF3A-210ENST00000493727 LINC01587Q99440 93 aa8.77□□□□□ -1.01
UPF3A-210ENST00000493727 C20orf144Q9BQM9 153 aa8.77□□□□□ -1.01
UPF3A-210ENST00000493727 DNAH2Q9P225 4427 aa8.77□□□□□ -1.01
UPF3A-210ENST00000493727 H7BYZ3 331 aa8.76□□□□□ -1.01
UPF3A-210ENST00000493727 GATCO43716 136 aaKnown RBP8.76□□□□□ -1.01
UPF3A-210ENST00000493727 LY6G6CO95867 125 aa8.76□□□□□ -1.01
UPF3A-210ENST00000493727 GIG44P09565 113 aaPredicted RBP8.76□□□□□ -1.01
UPF3A-210ENST00000493727 HTN1P15515 57 aa8.76□□□□□ -1.01
UPF3A-210ENST00000493727 CRIP1P50238 77 aa8.76□□□□□ -1.01
UPF3A-210ENST00000493727 MUC21Q5SSG8 566 aa8.76□□□□□ -1.01
UPF3A-210ENST00000493727 C10orf91Q5T1B1 145 aa8.76□□□□□ -1.01
UPF3A-210ENST00000493727 IBA57Q5T440 356 aaKnown RBP8.76□□□□□ -1.01
UPF3A-210ENST00000493727 FAM159AQ6UWV7 190 aa8.76□□□□□ -1.01
UPF3A-210ENST00000493727 TMEM256Q8N2U0 113 aa8.76□□□□□ -1.01
UPF3A-210ENST00000493727 SVBPQ8N300 66 aa8.76□□□□□ -1.01
UPF3A-210ENST00000493727 RNASE7Q9H1E1 156 aaKnown RBP8.76□□□□□ -1.01
UPF3A-210ENST00000493727 IGHV1OR15-1A0A075B7D0 117 aa8.75□□□□□ -1.01
UPF3A-210ENST00000493727 TMSB15BA0A087X1C1 80 aa8.75□□□□□ -1.01
UPF3A-210ENST00000493727 TMEM189A5PLL7 270 aa8.75□□□□□ -1.01
UPF3A-210ENST00000493727 ZNF705GA8MUZ8 300 aaPredicted RBP8.75□□□□□ -1.01
UPF3A-210ENST00000493727 B4DEV8 164 aa8.75□□□□□ -1.01
UPF3A-210ENST00000493727 PTTG1IPP53801 180 aa8.75□□□□□ -1.01
UPF3A-210ENST00000493727 Q6ZQT7 251 aa8.75□□□□□ -1.01
UPF3A-210ENST00000493727 Q8N1X5 172 aa8.75□□□□□ -1.01
UPF3A-210ENST00000493727 SFRP2Q96HF1 295 aa8.75□□□□□ -1.01
UPF3A-210ENST00000493727 PYGO2Q9BRQ0 406 aa8.75□□□□□ -1.01
UPF3A-210ENST00000493727 DYNC1H1Q14204 4646 aaKnown RBP8.74□□□□□ -1.01
UPF3A-210ENST00000493727 C19orf71A6NCJ1 209 aa8.74□□□□□ -1.01
UPF3A-210ENST00000493727 CBY3A6NI87 242 aa8.74□□□□□ -1.01
UPF3A-210ENST00000493727 ATP6V1G1O75348 118 aa8.74□□□□□ -1.01
UPF3A-210ENST00000493727 ZNF324O75467 553 aaPredicted RBP8.74□□□□□ -1.01
UPF3A-210ENST00000493727 SNAPINO95295 136 aa8.74□□□□□ -1.01
UPF3A-210ENST00000493727 RBMY1A1P0DJD3 496 aaKnown RBP8.74□□□□□ -1.01
UPF3A-210ENST00000493727 RBMY1CP0DJD4 496 aa8.74□□□□□ -1.01
UPF3A-210ENST00000493727 RBMY1FQ15415 496 aaKnown RBP8.74□□□□□ -1.01
UPF3A-210ENST00000493727 ANXA2RQ3ZCQ2 193 aa8.74□□□□□ -1.01
UPF3A-210ENST00000493727 FAM231DQ6ZW35 169 aa8.74□□□□□ -1.01
UPF3A-210ENST00000493727 C1orf158Q8N1D5 194 aa8.74□□□□□ -1.01
UPF3A-210ENST00000493727 OR2D3Q8NGH3 330 aa8.74□□□□□ -1.01
UPF3A-210ENST00000493727 OR10G8Q8NGN5 311 aa8.74□□□□□ -1.01
UPF3A-210ENST00000493727 KCNS1Q96KK3 526 aa8.74□□□□□ -1.01
UPF3A-210ENST00000493727 RPP21Q9H633 154 aaKnown RBP8.74□□□□□ -1.01
UPF3A-210ENST00000493727 OSTCQ9NRP0 149 aa8.74□□□□□ -1.01
UPF3A-210ENST00000493727 TRGV11A0A075B6L2 103 aa8.73□□□□□ -1.01
UPF3A-210ENST00000493727 XKRY2A2RUG3 117 aa8.73□□□□□ -1.01
UPF3A-210ENST00000493727 PPP1R2P9O14990 202 aa8.73□□□□□ -1.01
UPF3A-210ENST00000493727 MT-ND4LP03901 98 aa8.73□□□□□ -1.01
UPF3A-210ENST00000493727 RPS20P60866 119 aaKnown RBP8.73□□□□□ -1.01
UPF3A-210ENST00000493727 RPL19P84098 196 aaKnown RBP8.73□□□□□ -1.01
UPF3A-210ENST00000493727 RHEBQ15382 184 aa8.73□□□□□ -1.01
UPF3A-210ENST00000493727 CSNK1G2-AS1Q8NCQ2 148 aa8.73□□□□□ -1.01
UPF3A-210ENST00000493727 C11orf21Q9P2W6 132 aa8.73□□□□□ -1.01
UPF3A-210ENST00000493727 S100A4P26447 101 aaKnown RBP8.72□□□□□ -1.01
UPF3A-210ENST00000493727 ASIPP42127 132 aa8.72□□□□□ -1.01
UPF3A-210ENST00000493727 RRN3P1Q2M238 152 aa8.72□□□□□ -1.01
UPF3A-210ENST00000493727 RNF212Q495C1 297 aa8.72□□□□□ -1.01
UPF3A-210ENST00000493727 C11orf68Q9H3H3 251 aaKnown RBP8.72□□□□□ -1.01
UPF3A-210ENST00000493727 RPS10P5Q9NQ39 176 aa8.72□□□□□ -1.01
UPF3A-210ENST00000493727 DNAH11Q96DT5 4516 aa8.72□□□□□ -1.01
UPF3A-210ENST00000493727 IGKV3D-20A0A0C4DH25 116 aa8.71□□□□□ -1.02
UPF3A-210ENST00000493727 GRIFINA4D1Z8 144 aa8.71□□□□□ -1.02
UPF3A-210ENST00000493727 TYMSP04818 313 aa8.71□□□□□ -1.02
UPF3A-210ENST00000493727 S100A1P23297 94 aa8.71□□□□□ -1.02
UPF3A-210ENST00000493727 ZNF705AQ6ZN79 300 aaPredicted RBP8.71□□□□□ -1.02
UPF3A-210ENST00000493727 OR11H2Q8NH07 326 aa8.71□□□□□ -1.02
UPF3A-210ENST00000493727 PHLDA1Q8WV24 401 aaPredicted RBP8.71□□□□□ -1.02
UPF3A-210ENST00000493727 TPPP3Q9BW30 176 aa8.71□□□□□ -1.02
UPF3A-210ENST00000493727 TIMM8BQ9Y5J9 83 aaPredicted RBP8.71□□□□□ -1.02
UPF3A-210ENST00000493727 DNAH17Q9UFH2 4485 aa8.71□□□□□ -1.02
UPF3A-210ENST00000493727 C7orf77A4D0Y5 90 aa8.7□□□□□ -1.02
UPF3A-210ENST00000493727 SMIM9A6NGZ8 99 aa8.7□□□□□ -1.02
UPF3A-210ENST00000493727 A8MWL6 223 aa8.7□□□□□ -1.02
UPF3A-210ENST00000493727 GNRH2O43555 120 aa8.7□□□□□ -1.02
UPF3A-210ENST00000493727 GZMBP10144 247 aa8.7□□□□□ -1.02
UPF3A-210ENST00000493727 ZNF415Q09FC8 603 aa8.7□□□□□ -1.02
UPF3A-210ENST00000493727 TDRG1Q3Y452 100 aa8.7□□□□□ -1.02
UPF3A-210ENST00000493727 LINC00467Q9BRT7 94 aa8.7□□□□□ -1.02
UPF3A-210ENST00000493727 CTDSP1Q9GZU7 261 aa8.7□□□□□ -1.02
UPF3A-210ENST00000493727 TP53TG3Q9ULZ0 132 aa8.7□□□□□ -1.02
UPF3A-210ENST00000493727 V9GYV3 84 aa8.7□□□□□ -1.02
UPF3A-210ENST00000493727 H3BVH4 76 aa8.69□□□□□ -1.02
UPF3A-210ENST00000493727 TCL1AP56279 114 aa8.69□□□□□ -1.02
UPF3A-210ENST00000493727 TCTAP57738 103 aa8.69□□□□□ -1.02
UPF3A-210ENST00000493727 LGALS9CQ6DKI2 356 aa8.69□□□□□ -1.02
UPF3A-210ENST00000493727 C11orf45Q8TAV5 145 aa8.69□□□□□ -1.02
UPF3A-210ENST00000493727 TMEM263Q8WUH6 116 aaKnown RBP8.69□□□□□ -1.02
UPF3A-210ENST00000493727 C16orf74Q96GX8 76 aa8.69□□□□□ -1.02
UPF3A-210ENST00000493727 NEU1Q99519 415 aa8.69□□□□□ -1.02
UPF3A-210ENST00000493727 FAM30AQ9NZY2 134 aa8.69□□□□□ -1.02
UPF3A-210ENST00000493727 ABCA13Q86UQ4 5058 aa8.69□□□□□ -1.02
UPF3A-210ENST00000493727 SNURFLB1AK76 121 aa8.68□□□□□ -1.02
UPF3A-210ENST00000493727 PRM2P04554 102 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 275.6 ms