RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, human

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPR-208	ENST00000492973	DUSP14	O95147	198 aa	Known RBP	4.97	□□□□□ -1.61
TPR-208	ENST00000492973	GIG44	P09565	113 aa	Predicted RBP	4.97	□□□□□ -1.61
TPR-208	ENST00000492973	MGST1	P10620	155 aa	Known RBP	4.97	□□□□□ -1.61
TPR-208	ENST00000492973	HLA-DRB4	P13762	266 aa		4.97	□□□□□ -1.61
TPR-208	ENST00000492973	RPL35A	P18077	110 aa	Known RBP	4.97	□□□□□ -1.61
TPR-208	ENST00000492973	ZNF80	P51504	273 aa	Predicted RBP	4.97	□□□□□ -1.61
TPR-208	ENST00000492973	RNF212	Q495C1	297 aa		4.97	□□□□□ -1.61
TPR-208	ENST00000492973	EBLN2	Q6P2I7	272 aa		4.97	□□□□□ -1.61
TPR-208	ENST00000492973	TRPT1	Q86TN4	253 aa	Known RBP	4.97	□□□□□ -1.61
TPR-208	ENST00000492973		Q8TAT8	98 aa		4.97	□□□□□ -1.61
TPR-208	ENST00000492973	ZC2HC1A	Q96GY0	325 aa		4.97	□□□□□ -1.61
TPR-208	ENST00000492973	CSTL1	Q9H114	145 aa		4.97	□□□□□ -1.61
TPR-208	ENST00000492973	OSTC	Q9NRP0	149 aa		4.97	□□□□□ -1.61
TPR-208	ENST00000492973	LENEP	Q9Y5L5	61 aa		4.97	□□□□□ -1.61
TPR-208	ENST00000492973	HLA-DRB4	X5D2U9	266 aa		4.97	□□□□□ -1.61
TPR-208	ENST00000492973		A0A087WWC5	75 aa		4.96	□□□□□ -1.62
TPR-208	ENST00000492973	TRBV7-9	A0A0J9YWB2	115 aa		4.96	□□□□□ -1.62
TPR-208	ENST00000492973	C19orf71	A6NCJ1	209 aa		4.96	□□□□□ -1.62
TPR-208	ENST00000492973	SCO1	O75880	301 aa		4.96	□□□□□ -1.62
TPR-208	ENST00000492973	CRISP2	P16562	243 aa		4.96	□□□□□ -1.62
TPR-208	ENST00000492973	SMUG1	Q53HV7	270 aa		4.96	□□□□□ -1.62
TPR-208	ENST00000492973	AMTN	Q6UX39	209 aa		4.96	□□□□□ -1.62
TPR-208	ENST00000492973	FAM231D	Q6ZW35	169 aa		4.96	□□□□□ -1.62
TPR-208	ENST00000492973	SMIM29	Q86T20	159 aa		4.96	□□□□□ -1.62
TPR-208	ENST00000492973	STH	Q8IWL8	128 aa		4.96	□□□□□ -1.62
TPR-208	ENST00000492973	ZFAND2A	Q8N6M9	145 aa		4.96	□□□□□ -1.62
TPR-208	ENST00000492973	OR4B1	Q8NGF8	309 aa		4.96	□□□□□ -1.62
TPR-208	ENST00000492973	OR10G8	Q8NGN5	311 aa		4.96	□□□□□ -1.62
TPR-208	ENST00000492973	SFRP2	Q96HF1	295 aa		4.96	□□□□□ -1.62
TPR-208	ENST00000492973	RNASE7	Q9H1E1	156 aa	Known RBP	4.96	□□□□□ -1.62
TPR-208	ENST00000492973	RPS10P5	Q9NQ39	176 aa		4.96	□□□□□ -1.62
TPR-208	ENST00000492973		A0A087WYN8	130 aa		4.95	□□□□□ -1.62
TPR-208	ENST00000492973	KIR2DL5B	A0A0G2JN68	375 aa		4.95	□□□□□ -1.62
TPR-208	ENST00000492973	KIR2DL5B	A0A0G2JPC4	375 aa		4.95	□□□□□ -1.62
TPR-208	ENST00000492973	FABP5P3	A8MUU1	101 aa		4.95	□□□□□ -1.62
TPR-208	ENST00000492973	KLLN	B2CW77	178 aa		4.95	□□□□□ -1.62
TPR-208	ENST00000492973	GATC	O43716	136 aa	Known RBP	4.95	□□□□□ -1.62
TPR-208	ENST00000492973	IGKV3-20	P01619	116 aa		4.95	□□□□□ -1.62
TPR-208	ENST00000492973	MT-ND4L	P03901	98 aa		4.95	□□□□□ -1.62
TPR-208	ENST00000492973	RHEB	Q15382	184 aa		4.95	□□□□□ -1.62
TPR-208	ENST00000492973	PRR9	Q5T870	116 aa		4.95	□□□□□ -1.62
TPR-208	ENST00000492973	PRR27	Q6MZM9	219 aa		4.95	□□□□□ -1.62
TPR-208	ENST00000492973		Q6ZQT7	251 aa		4.95	□□□□□ -1.62
TPR-208	ENST00000492973		Q6ZTC4	211 aa		4.95	□□□□□ -1.62
TPR-208	ENST00000492973	KIR2DL5A	Q8N109	375 aa		4.95	□□□□□ -1.62
TPR-208	ENST00000492973	KIR2DL5B	Q8NHK3	375 aa		4.95	□□□□□ -1.62
TPR-208	ENST00000492973	ODF3	Q96PU9	254 aa		4.95	□□□□□ -1.62
TPR-208	ENST00000492973	TM2D3	Q9BRN9	247 aa		4.95	□□□□□ -1.62
TPR-208	ENST00000492973	NDFIP1	Q9BT67	221 aa		4.95	□□□□□ -1.62
TPR-208	ENST00000492973	RETN	Q9HD89	108 aa		4.95	□□□□□ -1.62
TPR-208	ENST00000492973	BIN3	Q9NQY0	253 aa		4.95	□□□□□ -1.62
TPR-208	ENST00000492973	TMEM242	Q9NWH2	141 aa		4.95	□□□□□ -1.62
TPR-208	ENST00000492973		V9GYV3	84 aa		4.95	□□□□□ -1.62
TPR-208	ENST00000492973	DNAH7	Q8WXX0	4024 aa		4.95	□□□□□ -1.62
TPR-208	ENST00000492973	PLEC	Q15149	4684 aa	Known RBP	4.94	□□□□□ -1.62
TPR-208	ENST00000492973	UBE2C	O00762	179 aa		4.94	□□□□□ -1.62
TPR-208	ENST00000492973	PPP1R2P9	O14990	202 aa		4.94	□□□□□ -1.62
TPR-208	ENST00000492973	CRX	O43186	299 aa	Predicted RBP	4.94	□□□□□ -1.62
TPR-208	ENST00000492973	SH2D1A	O60880	128 aa		4.94	□□□□□ -1.62
TPR-208	ENST00000492973	ZNF324	O75467	553 aa	Predicted RBP	4.94	□□□□□ -1.62
TPR-208	ENST00000492973	GPX1	P07203	203 aa		4.94	□□□□□ -1.62
TPR-208	ENST00000492973	PFN1	P07737	140 aa	Known RBP	4.94	□□□□□ -1.62
TPR-208	ENST00000492973	MT3	P25713	68 aa		4.94	□□□□□ -1.62
TPR-208	ENST00000492973	RNASE4	P34096	147 aa	Known RBP	4.94	□□□□□ -1.62
TPR-208	ENST00000492973	LEP	P41159	167 aa		4.94	□□□□□ -1.62
TPR-208	ENST00000492973	APOC4	P55056	127 aa		4.94	□□□□□ -1.62
TPR-208	ENST00000492973	FXYD7	P58549	80 aa		4.94	□□□□□ -1.62
TPR-208	ENST00000492973	IBA57	Q5T440	356 aa	Known RBP	4.94	□□□□□ -1.62
TPR-208	ENST00000492973	FAM162B	Q5T6X4	162 aa		4.94	□□□□□ -1.62
TPR-208	ENST00000492973		Q6AWC8	147 aa		4.94	□□□□□ -1.62
TPR-208	ENST00000492973	MORN3	Q6PF18	240 aa	Predicted RBP	4.94	□□□□□ -1.62
TPR-208	ENST00000492973	C15orf54	Q8N8G6	183 aa		4.94	□□□□□ -1.62
TPR-208	ENST00000492973	ZNF705G	A8MUZ8	300 aa	Predicted RBP	4.93	□□□□□ -1.62
TPR-208	ENST00000492973		H7BYZ3	331 aa		4.93	□□□□□ -1.62
TPR-208	ENST00000492973		M0R2Z0	102 aa		4.93	□□□□□ -1.62
TPR-208	ENST00000492973	CA1	P00915	261 aa	Predicted RBP	4.93	□□□□□ -1.62
TPR-208	ENST00000492973		P01737	135 aa		4.93	□□□□□ -1.62
TPR-208	ENST00000492973	TSPO	P30536	169 aa		4.93	□□□□□ -1.62
TPR-208	ENST00000492973	CDKN1B	P46527	198 aa		4.93	□□□□□ -1.62
TPR-208	ENST00000492973	BTN1A1	Q13410	526 aa		4.93	□□□□□ -1.62
TPR-208	ENST00000492973	SPINK13	Q1W4C9	94 aa		4.93	□□□□□ -1.62
TPR-208	ENST00000492973	DEFB135	Q30KP9	77 aa		4.93	□□□□□ -1.62
TPR-208	ENST00000492973	CSNK1G2-AS1	Q8NCQ2	148 aa		4.93	□□□□□ -1.62
TPR-208	ENST00000492973	OVOL2	Q9BRP0	275 aa		4.93	□□□□□ -1.62
TPR-208	ENST00000492973	IL36B	Q9NZH7	164 aa		4.93	□□□□□ -1.62
TPR-208	ENST00000492973	AGRN	O00468	2067 aa		4.93	□□□□□ -1.62
TPR-208	ENST00000492973	STARD9	Q9P2P6	4700 aa		4.92	□□□□□ -1.62
TPR-208	ENST00000492973	TRAV12-2	A0A075B6T6	113 aa		4.92	□□□□□ -1.62
TPR-208	ENST00000492973	TRAV12-3	A0A0B4J271	114 aa		4.92	□□□□□ -1.62
TPR-208	ENST00000492973	TRAV21	A0A0B4J279	112 aa		4.92	□□□□□ -1.62
TPR-208	ENST00000492973	IGKV3D-20	A0A0C4DH25	116 aa		4.92	□□□□□ -1.62
TPR-208	ENST00000492973	C7orf71	A4D174	169 aa		4.92	□□□□□ -1.62
TPR-208	ENST00000492973	TMEM189	A5PLL7	270 aa		4.92	□□□□□ -1.62
TPR-208	ENST00000492973	FOXA3	P55318	350 aa	Predicted RBP	4.92	□□□□□ -1.62
TPR-208	ENST00000492973	RPL19	P84098	196 aa	Known RBP	4.92	□□□□□ -1.62
TPR-208	ENST00000492973	GFI1B	Q5VTD9	330 aa		4.92	□□□□□ -1.62
TPR-208	ENST00000492973	CBLN2	Q8IUK8	224 aa		4.92	□□□□□ -1.62
TPR-208	ENST00000492973	OR2D3	Q8NGH3	330 aa		4.92	□□□□□ -1.62
TPR-208	ENST00000492973	YPEL4	Q96NS1	127 aa		4.92	□□□□□ -1.62
TPR-208	ENST00000492973	IMMP2L	Q96T52	175 aa		4.92	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms