RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 TRBV30A0A0K0K1B3 111 aa4.91□□□□□ -1.62
CCDC6-202ENST00000491922 PRAC2D3DTV9 90 aa4.91□□□□□ -1.62
CCDC6-202ENST00000491922 J3QQQ9 107 aa4.91□□□□□ -1.62
CCDC6-202ENST00000491922 IGHV4-39P01824 125 aa4.91□□□□□ -1.62
CCDC6-202ENST00000491922 TSPEAR-AS2P59090 65 aa4.91□□□□□ -1.62
CCDC6-202ENST00000491922 ZNF56Q15929 161 aa4.91□□□□□ -1.62
CCDC6-202ENST00000491922 DEFB121Q5J5C9 76 aa4.91□□□□□ -1.62
CCDC6-202ENST00000491922 C2orf82Q6UX34 121 aa4.91□□□□□ -1.62
CCDC6-202ENST00000491922 LYPD2Q6UXB3 125 aa4.91□□□□□ -1.62
CCDC6-202ENST00000491922 TMEM141Q96I45 108 aa4.91□□□□□ -1.62
CCDC6-202ENST00000491922 AMELXQ99217 191 aa4.91□□□□□ -1.62
CCDC6-202ENST00000491922 IMUPQ9GZP8 106 aa4.91□□□□□ -1.62
CCDC6-202ENST00000491922 DPH3P1Q9H4G8 78 aa4.91□□□□□ -1.62
CCDC6-202ENST00000491922 UBTD1Q9HAC8 227 aa4.91□□□□□ -1.62
CCDC6-202ENST00000491922 S4R3C0 116 aa4.91□□□□□ -1.62
CCDC6-202ENST00000491922 ACACBO00763 2458 aa4.91□□□□□ -1.62
CCDC6-202ENST00000491922 C17orf100A8MU93 164 aa4.91□□□□□ -1.62
CCDC6-202ENST00000491922 PATE3B3GLJ2 98 aa4.91□□□□□ -1.62
CCDC6-202ENST00000491922 F8W735 103 aaPredicted RBP4.91□□□□□ -1.62
CCDC6-202ENST00000491922 TMEM170BQ5T4T1 132 aa4.91□□□□□ -1.62
CCDC6-202ENST00000491922 NUP37Q8NFH4 326 aa4.91□□□□□ -1.62
CCDC6-202ENST00000491922 AGPAT4-IT1Q9H0P7 198 aa4.91□□□□□ -1.62
CCDC6-202ENST00000491922 SPANXCQ9NY87 97 aa4.91□□□□□ -1.62
CCDC6-202ENST00000491922 KAAG1Q9UBP8 84 aa4.91□□□□□ -1.62
CCDC6-202ENST00000491922 NCOR2Q9Y618 2525 aa4.9□□□□□ -1.62
CCDC6-202ENST00000491922 ABCA1O95477 2261 aa4.9□□□□□ -1.62
CCDC6-202ENST00000491922 RNF223E7ERA6 249 aa4.9□□□□□ -1.62
CCDC6-202ENST00000491922 H7C2G1 150 aa4.9□□□□□ -1.62
CCDC6-202ENST00000491922 EIF4EBP3O60516 100 aaPredicted RBP4.9□□□□□ -1.62
CCDC6-202ENST00000491922 LRRC75A-AS1Q8N1F1 130 aa4.9□□□□□ -1.62
CCDC6-202ENST00000491922 RPL39LQ96EH5 51 aaKnown RBP4.9□□□□□ -1.62
CCDC6-202ENST00000491922 FANCD2OSQ96PS1 177 aa4.9□□□□□ -1.62
CCDC6-202ENST00000491922 GVINP1Q7Z2Y8 2422 aa4.9□□□□□ -1.62
CCDC6-202ENST00000491922 TPRP12270 2363 aaKnown RBP4.9□□□□□ -1.63
CCDC6-202ENST00000491922 FAM208BQ5VWN6 2430 aa4.9□□□□□ -1.63
CCDC6-202ENST00000491922 MBD3L4A6NDZ8 208 aaPredicted RBP4.9□□□□□ -1.63
CCDC6-202ENST00000491922 MBD3L3A6NE82 208 aaPredicted RBP4.9□□□□□ -1.63
CCDC6-202ENST00000491922 MBD3L5A6NJ08 208 aaPredicted RBP4.9□□□□□ -1.63
CCDC6-202ENST00000491922 LEPROTO15243 131 aa4.9□□□□□ -1.63
CCDC6-202ENST00000491922 NBR2O15453 112 aa4.9□□□□□ -1.63
CCDC6-202ENST00000491922 NDUFA7O95182 113 aa4.9□□□□□ -1.63
CCDC6-202ENST00000491922 EBI3Q14213 229 aa4.9□□□□□ -1.63
CCDC6-202ENST00000491922 C9orf153Q5TBE3 101 aa4.9□□□□□ -1.63
CCDC6-202ENST00000491922 C3orf22Q8N5N4 141 aa4.9□□□□□ -1.63
CCDC6-202ENST00000491922 MBD3L2Q8NHZ7 208 aaPredicted RBP4.9□□□□□ -1.63
CCDC6-202ENST00000491922 MRPL53Q96EL3 112 aaKnown RBP4.9□□□□□ -1.63
CCDC6-202ENST00000491922 TIMM17AQ99595 171 aa4.9□□□□□ -1.63
CCDC6-202ENST00000491922 CADP27708 2225 aa4.89□□□□□ -1.63
CCDC6-202ENST00000491922 RIF1Q5UIP0 2472 aaKnown RBP4.89□□□□□ -1.63
CCDC6-202ENST00000491922 A0A1B0GX51 115 aa4.89□□□□□ -1.63
CCDC6-202ENST00000491922 IGIPA6NJ69 53 aa4.89□□□□□ -1.63
CCDC6-202ENST00000491922 J3KT08 172 aa4.89□□□□□ -1.63
CCDC6-202ENST00000491922 TSHBP01222 138 aa4.89□□□□□ -1.63
CCDC6-202ENST00000491922 ELANEP08246 267 aa4.89□□□□□ -1.63
CCDC6-202ENST00000491922 LINC00694P0DN24 101 aa4.89□□□□□ -1.63
CCDC6-202ENST00000491922 DLX1P56177 255 aa4.89□□□□□ -1.63
CCDC6-202ENST00000491922 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.89□□□□□ -1.63
CCDC6-202ENST00000491922 MUSTN1Q8IVN3 82 aa4.89□□□□□ -1.63
CCDC6-202ENST00000491922 TP53TG1Q9Y2A0 90 aa4.89□□□□□ -1.63
CCDC6-202ENST00000491922 MSRB2Q9Y3D2 182 aa4.89□□□□□ -1.63
CCDC6-202ENST00000491922 FREM2Q5SZK8 3169 aa4.89□□□□□ -1.63
CCDC6-202ENST00000491922 H7C423 109 aa4.89□□□□□ -1.63
CCDC6-202ENST00000491922 UQCRQO14949 82 aa4.89□□□□□ -1.63
CCDC6-202ENST00000491922 TRIAP1O43715 76 aa4.89□□□□□ -1.63
CCDC6-202ENST00000491922 ATP5G1P05496 136 aa4.89□□□□□ -1.63
CCDC6-202ENST00000491922 ACYP1P07311 99 aa4.89□□□□□ -1.63
CCDC6-202ENST00000491922 EMP1P54849 157 aa4.89□□□□□ -1.63
CCDC6-202ENST00000491922 C9orf47Q6ZRZ4 202 aa4.89□□□□□ -1.63
CCDC6-202ENST00000491922 RNF182Q8N6D2 247 aa4.89□□□□□ -1.63
CCDC6-202ENST00000491922 C14orf178Q8N769 122 aaPredicted RBP4.89□□□□□ -1.63
CCDC6-202ENST00000491922 CCL17Q92583 94 aa4.89□□□□□ -1.63
CCDC6-202ENST00000491922 SIT1Q9Y3P8 196 aa4.89□□□□□ -1.63
CCDC6-202ENST00000491922 A0A0J9YX75 114 aa4.88□□□□□ -1.63
CCDC6-202ENST00000491922 FAM236AA0A1B0GUQ0 79 aa4.88□□□□□ -1.63
CCDC6-202ENST00000491922 FAM236BA0A1B0GV22 79 aa4.88□□□□□ -1.63
CCDC6-202ENST00000491922 SDHAF1A6NFY7 115 aa4.88□□□□□ -1.63
CCDC6-202ENST00000491922 CD3EP07766 207 aa4.88□□□□□ -1.63
CCDC6-202ENST00000491922 CTSGP08311 255 aa4.88□□□□□ -1.63
CCDC6-202ENST00000491922 MGPP08493 103 aa4.88□□□□□ -1.63
CCDC6-202ENST00000491922 COX6CP09669 75 aa4.88□□□□□ -1.63
CCDC6-202ENST00000491922 ZNF876PQ49A33 203 aa4.88□□□□□ -1.63
CCDC6-202ENST00000491922 POM121L12Q8N7R1 296 aa4.88□□□□□ -1.63
CCDC6-202ENST00000491922 C3orf56Q8N813 242 aa4.88□□□□□ -1.63
CCDC6-202ENST00000491922 NPBQ8NG41 125 aa4.88□□□□□ -1.63
CCDC6-202ENST00000491922 GPR179Q6PRD1 2367 aa4.88□□□□□ -1.63
CCDC6-202ENST00000491922 F5H768 121 aa4.88□□□□□ -1.63
CCDC6-202ENST00000491922 LY6LH3BQJ8 138 aa4.88□□□□□ -1.63
CCDC6-202ENST00000491922 NPFFO15130 113 aa4.88□□□□□ -1.63
CCDC6-202ENST00000491922 ZNF883P0CG24 379 aa4.88□□□□□ -1.63
CCDC6-202ENST00000491922 MED14OSP0DP75 135 aa4.88□□□□□ -1.63
CCDC6-202ENST00000491922 SEM1Q6ZVN7 128 aa4.88□□□□□ -1.63
CCDC6-202ENST00000491922 ZNRF2Q8NHG8 242 aa4.88□□□□□ -1.63
CCDC6-202ENST00000491922 BEX4Q9NWD9 120 aaPredicted RBP4.88□□□□□ -1.63
CCDC6-202ENST00000491922 LENEPQ9Y5L5 61 aa4.88□□□□□ -1.63
CCDC6-202ENST00000491922 ICOSQ9Y6W8 199 aa4.88□□□□□ -1.63
CCDC6-202ENST00000491922 VPS13AQ96RL7 3174 aa4.87□□□□□ -1.63
CCDC6-202ENST00000491922 A0A1W2PNU3 283 aaPredicted RBP4.87□□□□□ -1.63
CCDC6-202ENST00000491922 TMEM223A0PJW6 202 aa4.87□□□□□ -1.63
CCDC6-202ENST00000491922 BUB3O43684 328 aa4.87□□□□□ -1.63
CCDC6-202ENST00000491922 COX7A1P24310 79 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms