RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 TMEM178BH3BS89 294 aa7.89□□□□□ -1.15
SREBF2-208ENST00000491541 LYRM7Q5U5X0 104 aa7.89□□□□□ -1.15
SREBF2-208ENST00000491541 BEX4Q9NWD9 120 aaPredicted RBP7.88□□□□□ -1.15
SREBF2-208ENST00000491541 ZNF815PA8K554 130 aa7.88□□□□□ -1.15
SREBF2-208ENST00000491541 OOSP1A8MZH6 123 aa7.88□□□□□ -1.15
SREBF2-208ENST00000491541 TEN1Q86WV5 123 aa7.88□□□□□ -1.15
SREBF2-208ENST00000491541 GAS8-AS1O95177 125 aa7.88□□□□□ -1.15
SREBF2-208ENST00000491541 DLX1P56177 255 aa7.88□□□□□ -1.15
SREBF2-208ENST00000491541 C3orf56Q8N813 242 aa7.88□□□□□ -1.15
SREBF2-208ENST00000491541 KIR2DL4Q99706 377 aa7.88□□□□□ -1.15
SREBF2-208ENST00000491541 TRAV26-2A0A0B4J265 109 aa7.87□□□□□ -1.15
SREBF2-208ENST00000491541 F8VRH5 84 aa7.87□□□□□ -1.15
SREBF2-208ENST00000491541 PPDPFLQ8WWR9 84 aa7.87□□□□□ -1.15
SREBF2-208ENST00000491541 MYMXA0A1B0GTQ4 84 aa7.87□□□□□ -1.15
SREBF2-208ENST00000491541 IGHV1-8P0DP01 117 aa7.87□□□□□ -1.15
SREBF2-208ENST00000491541 EGR2P11161 476 aaPredicted RBP7.87□□□□□ -1.15
SREBF2-208ENST00000491541 SHISA2Q6UWI4 295 aa7.87□□□□□ -1.15
SREBF2-208ENST00000491541 ZFP2Q6ZN57 461 aa7.87□□□□□ -1.15
SREBF2-208ENST00000491541 FANCD2OSQ96PS1 177 aa7.87□□□□□ -1.15
SREBF2-208ENST00000491541 USP9XQ93008 2570 aaPredicted RBP7.87□□□□□ -1.15
SREBF2-208ENST00000491541 IGLV4-69A0A075B6H9 119 aa7.87□□□□□ -1.15
SREBF2-208ENST00000491541 CNTFRP26992 372 aa7.87□□□□□ -1.15
SREBF2-208ENST00000491541 SLC50A1Q9BRV3 221 aa7.87□□□□□ -1.15
SREBF2-208ENST00000491541 ZFYVE26Q68DK2 2539 aa7.87□□□□□ -1.15
SREBF2-208ENST00000491541 SOCS3O14543 225 aa7.87□□□□□ -1.15
SREBF2-208ENST00000491541 IGHV3-23P01764 117 aa7.87□□□□□ -1.15
SREBF2-208ENST00000491541 EMP1P54849 157 aa7.87□□□□□ -1.15
SREBF2-208ENST00000491541 SPANXN1Q5VSR9 72 aa7.87□□□□□ -1.15
SREBF2-208ENST00000491541 C11orf86A6NJI1 115 aa7.86□□□□□ -1.15
SREBF2-208ENST00000491541 LYNX1G3V0Z9 82 aa7.86□□□□□ -1.15
SREBF2-208ENST00000491541 EIF4EBP3O60516 100 aaPredicted RBP7.86□□□□□ -1.15
SREBF2-208ENST00000491541 CRYGDP07320 174 aa7.86□□□□□ -1.15
SREBF2-208ENST00000491541 LGALS1P09382 135 aaKnown RBP7.86□□□□□ -1.15
SREBF2-208ENST00000491541 LYNX1P0DP58 116 aa7.86□□□□□ -1.15
SREBF2-208ENST00000491541 LINC00315P59091 139 aa7.86□□□□□ -1.15
SREBF2-208ENST00000491541 AGPAT4-IT1Q9H0P7 198 aa7.86□□□□□ -1.15
SREBF2-208ENST00000491541 ECSCRQ19T08 205 aa7.86□□□□□ -1.15
SREBF2-208ENST00000491541 SCGB3A1Q96QR1 104 aa7.86□□□□□ -1.15
SREBF2-208ENST00000491541 JMJD1CQ15652 2540 aa7.86□□□□□ -1.15
SREBF2-208ENST00000491541 C17orf100A8MU93 164 aa7.86□□□□□ -1.15
SREBF2-208ENST00000491541 IGHV3OR16-13A0A075B7E8 117 aa7.85□□□□□ -1.15
SREBF2-208ENST00000491541 IGHV3OR16-10A0A075B7F0 116 aa7.85□□□□□ -1.15
SREBF2-208ENST00000491541 IGHV3-74A0A0B4J1X5 117 aa7.85□□□□□ -1.15
SREBF2-208ENST00000491541 IGIPA6NJ69 53 aa7.85□□□□□ -1.15
SREBF2-208ENST00000491541 IGHV3-30P01768 117 aa7.85□□□□□ -1.15
SREBF2-208ENST00000491541 IGHV3-30-5P0DP03 117 aa7.85□□□□□ -1.15
SREBF2-208ENST00000491541 S100A4P26447 101 aaKnown RBP7.85□□□□□ -1.15
SREBF2-208ENST00000491541 HIST1H4AP62805 103 aaKnown RBP7.85□□□□□ -1.15
SREBF2-208ENST00000491541 AJUBAQ96IF1 538 aa7.85□□□□□ -1.15
SREBF2-208ENST00000491541 NAV2Q8IVL1 2488 aa7.85□□□□□ -1.15
SREBF2-208ENST00000491541 ZNF80P51504 273 aaPredicted RBP7.85□□□□□ -1.15
SREBF2-208ENST00000491541 TMEM78Q5T7P6 136 aa7.85□□□□□ -1.15
SREBF2-208ENST00000491541 RNF125Q96EQ8 232 aa7.85□□□□□ -1.15
SREBF2-208ENST00000491541 IMUPQ9GZP8 106 aa7.85□□□□□ -1.15
SREBF2-208ENST00000491541 A8MTW9 85 aa7.85□□□□□ -1.15
SREBF2-208ENST00000491541 H7C1H1 209 aa7.85□□□□□ -1.15
SREBF2-208ENST00000491541 HIVEP2P31629 2446 aa7.84□□□□□ -1.15
SREBF2-208ENST00000491541 SDHAF1A6NFY7 115 aa7.84□□□□□ -1.15
SREBF2-208ENST00000491541 C9JAW5 83 aa7.84□□□□□ -1.15
SREBF2-208ENST00000491541 SLC25A29Q8N8R3 303 aa7.84□□□□□ -1.15
SREBF2-208ENST00000491541 ODF3Q96PU9 254 aa7.84□□□□□ -1.15
SREBF2-208ENST00000491541 TIMM17AQ99595 171 aa7.84□□□□□ -1.15
SREBF2-208ENST00000491541 CLPSL1A2RUU4 121 aa7.84□□□□□ -1.15
SREBF2-208ENST00000491541 GAGE12JA6NER3 117 aa7.84□□□□□ -1.15
SREBF2-208ENST00000491541 TIMM23O14925 209 aa7.84□□□□□ -1.15
SREBF2-208ENST00000491541 GAGE7O76087 117 aa7.84□□□□□ -1.15
SREBF2-208ENST00000491541 IGHV1-69P01742 117 aa7.84□□□□□ -1.15
SREBF2-208ENST00000491541 ZNF688P0C7X2 276 aa7.84□□□□□ -1.15
SREBF2-208ENST00000491541 GAGE12FP0CL80 117 aa7.84□□□□□ -1.15
SREBF2-208ENST00000491541 GAGE12GP0CL81 117 aa7.84□□□□□ -1.15
SREBF2-208ENST00000491541 GAGE12IP0CL82 117 aa7.84□□□□□ -1.15
SREBF2-208ENST00000491541 HTN1P15515 57 aa7.84□□□□□ -1.15
SREBF2-208ENST00000491541 GAGE4Q13068 117 aa7.84□□□□□ -1.15
SREBF2-208ENST00000491541 ZNF256Q9Y2P7 627 aaPredicted RBP7.84□□□□□ -1.15
SREBF2-208ENST00000491541 FAM215AQ9Y5M1 114 aa7.84□□□□□ -1.15
SREBF2-208ENST00000491541 BUB1B-PAK6H3BSN5 160 aa7.84□□□□□ -1.15
SREBF2-208ENST00000491541 LAGE3Q14657 143 aa7.84□□□□□ -1.15
SREBF2-208ENST00000491541 PIK3CD-AS1Q5SR53 167 aa7.84□□□□□ -1.15
SREBF2-208ENST00000491541 NDUFA11Q86Y39 141 aa7.84□□□□□ -1.15
SREBF2-208ENST00000491541 GPHB5Q86YW7 130 aa7.84□□□□□ -1.15
SREBF2-208ENST00000491541 CTSZQ9UBR2 303 aa7.84□□□□□ -1.15
SREBF2-208ENST00000491541 SORL1Q92673 2214 aa7.83□□□□□ -1.16
SREBF2-208ENST00000491541 TMEM262E9PQX1 116 aa7.83□□□□□ -1.16
SREBF2-208ENST00000491541 MGPP08493 103 aa7.83□□□□□ -1.16
SREBF2-208ENST00000491541 WIPF1O43516 503 aa7.83□□□□□ -1.16
SREBF2-208ENST00000491541 PAPPA-AS1Q5QFB9 102 aa7.83□□□□□ -1.16
SREBF2-208ENST00000491541 IGHV3-66A0A0C4DH42 116 aa7.83□□□□□ -1.16
SREBF2-208ENST00000491541 IFITM1P13164 125 aa7.83□□□□□ -1.16
SREBF2-208ENST00000491541 BSPH1Q075Z2 132 aa7.83□□□□□ -1.16
SREBF2-208ENST00000491541 MSRB2Q9Y3D2 182 aa7.83□□□□□ -1.16
SREBF2-208ENST00000491541 IGKV3D-20A0A0C4DH25 116 aa7.82□□□□□ -1.16
SREBF2-208ENST00000491541 IGHV4-39P01824 125 aa7.82□□□□□ -1.16
SREBF2-208ENST00000491541 HLA-DMBP28068 263 aa7.82□□□□□ -1.16
SREBF2-208ENST00000491541 PPP1R27Q86WC6 154 aa7.82□□□□□ -1.16
SREBF2-208ENST00000491541 PRADC1Q9BSG0 188 aa7.82□□□□□ -1.16
SREBF2-208ENST00000491541 DTX2Q86UW9 622 aa7.82□□□□□ -1.16
SREBF2-208ENST00000491541 ANKRD29Q8N6D5 301 aa7.82□□□□□ -1.16
SREBF2-208ENST00000491541 KLHL30-AS1Q8NEE0 82 aa7.82□□□□□ -1.16
SREBF2-208ENST00000491541 LITAFQ99732 161 aa7.82□□□□□ -1.16
SREBF2-208ENST00000491541 TRBV30A0A0K0K1B3 111 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms