RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 F2Z2F3 143 aa13.35□□□□□ -0.27
MCF2L-230ENST00000491028 ATP6V1G1O75348 118 aa13.35□□□□□ -0.27
MCF2L-230ENST00000491028 CTRLP40313 264 aa13.35□□□□□ -0.27
MCF2L-230ENST00000491028 GTSF1Q8WW33 167 aa13.35□□□□□ -0.27
MCF2L-230ENST00000491028 PTH2Q96A98 100 aa13.35□□□□□ -0.27
MCF2L-230ENST00000491028 RPS10P5Q9NQ39 176 aa13.35□□□□□ -0.27
MCF2L-230ENST00000491028 M0R2P5 195 aa13.34□□□□□ -0.27
MCF2L-230ENST00000491028 DEFB4AO15263 64 aa13.34□□□□□ -0.27
MCF2L-230ENST00000491028 S100A1P23297 94 aa13.34□□□□□ -0.27
MCF2L-230ENST00000491028 EMP1P54849 157 aa13.34□□□□□ -0.27
MCF2L-230ENST00000491028 LGALS9BQ3B8N2 356 aa13.34□□□□□ -0.27
MCF2L-230ENST00000491028 NDUFAF3Q9BU61 184 aa13.34□□□□□ -0.27
MCF2L-230ENST00000491028 NOP10Q9NPE3 64 aaKnown RBP13.34□□□□□ -0.27
MCF2L-230ENST00000491028 NAT8BQ9UHF3 227 aa13.34□□□□□ -0.27
MCF2L-230ENST00000491028 PHLDA3Q9Y5J5 127 aa13.34□□□□□ -0.27
MCF2L-230ENST00000491028 A0A0J9YWU9 116 aa13.33□□□□□ -0.28
MCF2L-230ENST00000491028 HIGD1CA8MV81 97 aa13.33□□□□□ -0.28
MCF2L-230ENST00000491028 SPINK4O60575 86 aa13.33□□□□□ -0.28
MCF2L-230ENST00000491028 PIK3CD-AS1Q5SR53 167 aa13.33□□□□□ -0.28
MCF2L-230ENST00000491028 LYZL1Q6UWQ5 148 aa13.33□□□□□ -0.28
MCF2L-230ENST00000491028 IMMP2LQ96T52 175 aa13.33□□□□□ -0.28
MCF2L-230ENST00000491028 TPPP3Q9BW30 176 aa13.33□□□□□ -0.28
MCF2L-230ENST00000491028 SPART-AS1P0CW21 52 aa13.32□□□□□ -0.28
MCF2L-230ENST00000491028 CACNG7P62955 275 aa13.32□□□□□ -0.28
MCF2L-230ENST00000491028 FAM222AQ5U5X8 452 aa13.32□□□□□ -0.28
MCF2L-230ENST00000491028 WDR73Q6P4I2 378 aa13.32□□□□□ -0.28
MCF2L-230ENST00000491028 ZFP82Q8N141 532 aa13.32□□□□□ -0.28
MCF2L-230ENST00000491028 SYT8Q8NBV8 401 aa13.32□□□□□ -0.28
MCF2L-230ENST00000491028 CNFNQ9BYD5 112 aa13.32□□□□□ -0.28
MCF2L-230ENST00000491028 DKK2Q9UBU2 259 aa13.32□□□□□ -0.28
MCF2L-230ENST00000491028 DNAH9Q9NYC9 4486 aa13.32□□□□□ -0.28
MCF2L-230ENST00000491028 NXPH4O95158 308 aa13.31□□□□□ -0.28
MCF2L-230ENST00000491028 SPANXN1Q5VSR9 72 aa13.31□□□□□ -0.28
MCF2L-230ENST00000491028 OR10AG1Q8NH19 301 aa13.31□□□□□ -0.28
MCF2L-230ENST00000491028 RASL10AQ92737 203 aa13.31□□□□□ -0.28
MCF2L-230ENST00000491028 BORCS7Q96B45 105 aa13.31□□□□□ -0.28
MCF2L-230ENST00000491028 IGHV4-4A0A075B6R2 117 aa13.3□□□□□ -0.28
MCF2L-230ENST00000491028 TRGV1A0A0A0MS02 117 aa13.3□□□□□ -0.28
MCF2L-230ENST00000491028 ZNF876PQ49A33 203 aa13.3□□□□□ -0.28
MCF2L-230ENST00000491028 KCNIP4Q6PIL6 250 aa13.3□□□□□ -0.28
MCF2L-230ENST00000491028 LINC00612Q8N6U2 182 aa13.3□□□□□ -0.28
MCF2L-230ENST00000491028 NUP35Q8NFH5 326 aa13.3□□□□□ -0.28
MCF2L-230ENST00000491028 PGLYRP4Q96LB8 373 aa13.3□□□□□ -0.28
MCF2L-230ENST00000491028 MRPL16Q9NX20 251 aaKnown RBP13.3□□□□□ -0.28
MCF2L-230ENST00000491028 U3KQK5 164 aa13.3□□□□□ -0.28
MCF2L-230ENST00000491028 MUC4Q99102 2169 aa13.3□□□□□ -0.28
MCF2L-230ENST00000491028 PRKDCP78527 4128 aaKnown RBP13.29□□□□□ -0.28
MCF2L-230ENST00000491028 TENM3Q9P273 2699 aa13.29□□□□□ -0.28
MCF2L-230ENST00000491028 CXorf65A6NEN9 183 aa13.29□□□□□ -0.28
MCF2L-230ENST00000491028 M0R381 172 aa13.29□□□□□ -0.28
MCF2L-230ENST00000491028 ATRAIDQ6UW56 229 aa13.29□□□□□ -0.28
MCF2L-230ENST00000491028 Q6ZTI0 123 aa13.29□□□□□ -0.28
MCF2L-230ENST00000491028 CELA1Q9UNI1 258 aa13.29□□□□□ -0.28
MCF2L-230ENST00000491028 A0A1B0GUT8 65 aa13.28□□□□□ -0.28
MCF2L-230ENST00000491028 S100PP25815 95 aa13.28□□□□□ -0.28
MCF2L-230ENST00000491028 C18orf15Q96N68 181 aa13.28□□□□□ -0.28
MCF2L-230ENST00000491028 HUWE1Q7Z6Z7 4374 aaKnown RBP13.27□□□□□ -0.28
MCF2L-230ENST00000491028 COL7A1Q02388 2944 aa13.27□□□□□ -0.28
MCF2L-230ENST00000491028 TRAV9-1A0A075B6T8 112 aa13.27□□□□□ -0.29
MCF2L-230ENST00000491028 GAGE12BA1L429 117 aa13.27□□□□□ -0.29
MCF2L-230ENST00000491028 GAGE7O76087 117 aa13.27□□□□□ -0.29
MCF2L-230ENST00000491028 GAGE12FP0CL80 117 aa13.27□□□□□ -0.29
MCF2L-230ENST00000491028 GAGE12GP0CL81 117 aa13.27□□□□□ -0.29
MCF2L-230ENST00000491028 GAGE12IP0CL82 117 aa13.27□□□□□ -0.29
MCF2L-230ENST00000491028 DMRTA1Q5VZB9 504 aa13.27□□□□□ -0.29
MCF2L-230ENST00000491028 MUC21A0A0G2JKD1 596 aa13.26□□□□□ -0.29
MCF2L-230ENST00000491028 MUC21A0A140T8X8 626 aa13.26□□□□□ -0.29
MCF2L-230ENST00000491028 NTF3P20783 257 aa13.26□□□□□ -0.29
MCF2L-230ENST00000491028 FAM3BP58499 235 aaPredicted RBP13.26□□□□□ -0.29
MCF2L-230ENST00000491028 DAD1P61803 113 aa13.26□□□□□ -0.29
MCF2L-230ENST00000491028 RIGQ13278 110 aa13.26□□□□□ -0.29
MCF2L-230ENST00000491028 TRGV2A0A075B6R0 118 aa13.25□□□□□ -0.29
MCF2L-230ENST00000491028 A0A1B0GW15 77 aa13.25□□□□□ -0.29
MCF2L-230ENST00000491028 A8MWV9 139 aa13.25□□□□□ -0.29
MCF2L-230ENST00000491028 DEFB130BP0DP73 79 aa13.25□□□□□ -0.29
MCF2L-230ENST00000491028 DEFB130AP0DP74 79 aa13.25□□□□□ -0.29
MCF2L-230ENST00000491028 ATP5L2Q7Z4Y8 100 aa13.25□□□□□ -0.29
MCF2L-230ENST00000491028 C11orf45Q8TAV5 145 aa13.25□□□□□ -0.29
MCF2L-230ENST00000491028 BTF3L4Q96K17 158 aa13.25□□□□□ -0.29
MCF2L-230ENST00000491028 AP1S3Q96PC3 154 aa13.25□□□□□ -0.29
MCF2L-230ENST00000491028 EDA2RQ9HAV5 297 aa13.25□□□□□ -0.29
MCF2L-230ENST00000491028 TRGC1P0CF51 173 aa13.24□□□□□ -0.29
MCF2L-230ENST00000491028 TWIST1Q15672 202 aa13.24□□□□□ -0.29
MCF2L-230ENST00000491028 TRAV4A0A0B4J268 109 aa13.23□□□□□ -0.29
MCF2L-230ENST00000491028 RS1O15537 224 aa13.23□□□□□ -0.29
MCF2L-230ENST00000491028 CIDEAO60543 219 aa13.23□□□□□ -0.29
MCF2L-230ENST00000491028 SSTP61278 116 aa13.23□□□□□ -0.29
MCF2L-230ENST00000491028 SMCO4Q9NRQ5 59 aa13.23□□□□□ -0.29
MCF2L-230ENST00000491028 URGCP-MRPS24S4R325 110 aa13.23□□□□□ -0.29
MCF2L-230ENST00000491028 S100A8P05109 93 aa13.22□□□□□ -0.29
MCF2L-230ENST00000491028 HBBP68871 147 aa13.22□□□□□ -0.29
MCF2L-230ENST00000491028 C12orf74Q32Q52 190 aa13.22□□□□□ -0.29
MCF2L-230ENST00000491028 CFAP126Q5VTH2 177 aa13.22□□□□□ -0.29
MCF2L-230ENST00000491028 MSRB1Q9NZV6 116 aa13.22□□□□□ -0.29
MCF2L-230ENST00000491028 TGP01266 2768 aa13.22□□□□□ -0.29
MCF2L-230ENST00000491028 A0A1B0GXF2 115 aa13.21□□□□□ -0.29
MCF2L-230ENST00000491028 RHODO00212 210 aa13.21□□□□□ -0.29
MCF2L-230ENST00000491028 ATP5G1P05496 136 aa13.21□□□□□ -0.29
MCF2L-230ENST00000491028 MRPL54Q6P161 138 aaKnown RBP13.21□□□□□ -0.29
MCF2L-230ENST00000491028 SMIM15Q7Z3B0 74 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms