RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 C11orf21Q9P2W6 132 aa8.45□□□□□ -1.06
EXOSC3-207ENST00000490516 FAM231BA6NCW3 169 aa8.44□□□□□ -1.06
EXOSC3-207ENST00000490516 UFSP1Q6NVU6 142 aa8.44□□□□□ -1.06
EXOSC3-207ENST00000490516 CLPSL2Q6UWE3 100 aa8.44□□□□□ -1.06
EXOSC3-207ENST00000490516 PTH2Q96A98 100 aa8.44□□□□□ -1.06
EXOSC3-207ENST00000490516 UBE2L5PA0A1B0GUS4 154 aa8.43□□□□□ -1.06
EXOSC3-207ENST00000490516 CST7O76096 145 aa8.43□□□□□ -1.06
EXOSC3-207ENST00000490516 TCRBP04435 133 aa8.43□□□□□ -1.06
EXOSC3-207ENST00000490516 SMIM18P0DKX4 95 aa8.43□□□□□ -1.06
EXOSC3-207ENST00000490516 RNASE3P12724 160 aaKnown RBP8.43□□□□□ -1.06
EXOSC3-207ENST00000490516 COX6A2Q02221 97 aa8.43□□□□□ -1.06
EXOSC3-207ENST00000490516 BAXQ07812 192 aa8.43□□□□□ -1.06
EXOSC3-207ENST00000490516 STPG4Q8N801 248 aa8.43□□□□□ -1.06
EXOSC3-207ENST00000490516 TMEM75Q8N9X5 138 aa8.43□□□□□ -1.06
EXOSC3-207ENST00000490516 OR10G7Q8NGN6 311 aa8.43□□□□□ -1.06
EXOSC3-207ENST00000490516 MCFD2Q8NI22 146 aa8.43□□□□□ -1.06
EXOSC3-207ENST00000490516 TMED6Q8WW62 240 aa8.43□□□□□ -1.06
EXOSC3-207ENST00000490516 UQCC1Q9NVA1 299 aa8.43□□□□□ -1.06
EXOSC3-207ENST00000490516 A0A087WWL8 130 aa8.42□□□□□ -1.06
EXOSC3-207ENST00000490516 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.42□□□□□ -1.06
EXOSC3-207ENST00000490516 IGKV2-24A0A0C4DH68 120 aa8.42□□□□□ -1.06
EXOSC3-207ENST00000490516 HYLS1Q96M11 299 aa8.42□□□□□ -1.06
EXOSC3-207ENST00000490516 BCL7BQ9BQE9 202 aa8.42□□□□□ -1.06
EXOSC3-207ENST00000490516 TREM1Q9NP99 234 aa8.42□□□□□ -1.06
EXOSC3-207ENST00000490516 TRAV26-2A0A0B4J265 109 aa8.41□□□□□ -1.06
EXOSC3-207ENST00000490516 A8MWV9 139 aa8.41□□□□□ -1.06
EXOSC3-207ENST00000490516 IAH1Q2TAA2 248 aaPredicted RBP8.41□□□□□ -1.06
EXOSC3-207ENST00000490516 LGALSLQ3ZCW2 172 aaPredicted RBP8.41□□□□□ -1.06
EXOSC3-207ENST00000490516 DIRAS2Q96HU8 199 aa8.41□□□□□ -1.06
EXOSC3-207ENST00000490516 NAA50Q9GZZ1 169 aaKnown RBP8.41□□□□□ -1.06
EXOSC3-207ENST00000490516 AP5S1Q9NUS5 200 aa8.41□□□□□ -1.06
EXOSC3-207ENST00000490516 GSKIPQ9P0R6 139 aa8.41□□□□□ -1.06
EXOSC3-207ENST00000490516 RABL2AQ9UBK7 228 aaPredicted RBP8.41□□□□□ -1.06
EXOSC3-207ENST00000490516 C9orf170A2RU37 121 aa8.4□□□□□ -1.06
EXOSC3-207ENST00000490516 CCSO14618 274 aa8.4□□□□□ -1.06
EXOSC3-207ENST00000490516 MBPP02686 304 aaPredicted RBP8.4□□□□□ -1.06
EXOSC3-207ENST00000490516 FGF7P21781 194 aa8.4□□□□□ -1.06
EXOSC3-207ENST00000490516 ZNF80P51504 273 aaPredicted RBP8.4□□□□□ -1.06
EXOSC3-207ENST00000490516 VCX3AQ9NNX9 186 aa8.4□□□□□ -1.06
EXOSC3-207ENST00000490516 IGLV10-54A0A075B6I4 117 aa8.39□□□□□ -1.07
EXOSC3-207ENST00000490516 FAM24AA6NFZ4 105 aa8.39□□□□□ -1.07
EXOSC3-207ENST00000490516 BCAP31P51572 246 aa8.39□□□□□ -1.07
EXOSC3-207ENST00000490516 ZNF664Q8N3J9 261 aa8.39□□□□□ -1.07
EXOSC3-207ENST00000490516 PRR26Q8N8Z3 221 aa8.39□□□□□ -1.07
EXOSC3-207ENST00000490516 PRSS3P2Q8NHM4 247 aa8.39□□□□□ -1.07
EXOSC3-207ENST00000490516 CHAC2Q8WUX2 184 aa8.39□□□□□ -1.07
EXOSC3-207ENST00000490516 NMES1Q9C002 83 aa8.39□□□□□ -1.07
EXOSC3-207ENST00000490516 PRR34Q9NV39 138 aa8.39□□□□□ -1.07
EXOSC3-207ENST00000490516 PSORS1C2Q9UIG4 136 aa8.39□□□□□ -1.07
EXOSC3-207ENST00000490516 TRBV6-8A0A0A6YYG3 113 aa8.38□□□□□ -1.07
EXOSC3-207ENST00000490516 L7N2F9 121 aa8.38□□□□□ -1.07
EXOSC3-207ENST00000490516 OR7C2O60412 319 aa8.38□□□□□ -1.07
EXOSC3-207ENST00000490516 FAUP35544 74 aaKnown RBP8.38□□□□□ -1.07
EXOSC3-207ENST00000490516 VAMP2P63027 116 aa8.38□□□□□ -1.07
EXOSC3-207ENST00000490516 CTF1Q16619 201 aa8.38□□□□□ -1.07
EXOSC3-207ENST00000490516 Q6ZRP5 223 aa8.38□□□□□ -1.07
EXOSC3-207ENST00000490516 GOLT1AQ6ZVE7 132 aa8.38□□□□□ -1.07
EXOSC3-207ENST00000490516 LINC00269Q8N2A0 174 aa8.38□□□□□ -1.07
EXOSC3-207ENST00000490516 SLC25A21Q9BQT8 299 aaPredicted RBP8.38□□□□□ -1.07
EXOSC3-207ENST00000490516 NDUFS6O75380 124 aaKnown RBP8.37□□□□□ -1.07
EXOSC3-207ENST00000490516 UBE2D3P61077 147 aa8.37□□□□□ -1.07
EXOSC3-207ENST00000490516 UBE2D2P62837 147 aa8.37□□□□□ -1.07
EXOSC3-207ENST00000490516 CACNG7P62955 275 aa8.37□□□□□ -1.07
EXOSC3-207ENST00000490516 SGK494Q96LW2 274 aa8.37□□□□□ -1.07
EXOSC3-207ENST00000490516 NPCDR1Q9BY65 106 aa8.37□□□□□ -1.07
EXOSC3-207ENST00000490516 A0A087WXM4 84 aa8.36□□□□□ -1.07
EXOSC3-207ENST00000490516 UBE2L3P68036 154 aaKnown RBP8.36□□□□□ -1.07
EXOSC3-207ENST00000490516 SPANXN2Q5MJ10 180 aa8.36□□□□□ -1.07
EXOSC3-207ENST00000490516 FAM74A4Q5TZK3 123 aa8.36□□□□□ -1.07
EXOSC3-207ENST00000490516 CHCHD5Q9BSY4 110 aa8.36□□□□□ -1.07
EXOSC3-207ENST00000490516 SLIRPQ9GZT3 109 aaKnown RBP8.36□□□□□ -1.07
EXOSC3-207ENST00000490516 RSL24D1Q9UHA3 163 aaKnown RBP8.36□□□□□ -1.07
EXOSC3-207ENST00000490516 PTTG1O95997 202 aa8.35□□□□□ -1.07
EXOSC3-207ENST00000490516 RPL36AP83881 106 aaKnown RBP8.35□□□□□ -1.07
EXOSC3-207ENST00000490516 CMTM2Q8TAZ6 248 aa8.35□□□□□ -1.07
EXOSC3-207ENST00000490516 RPL36ALQ969Q0 106 aaKnown RBP8.35□□□□□ -1.07
EXOSC3-207ENST00000490516 LSM5Q9Y4Y9 91 aaKnown RBP8.35□□□□□ -1.07
EXOSC3-207ENST00000490516 TRBV7-3A0A075B6L6 115 aa8.34□□□□□ -1.07
EXOSC3-207ENST00000490516 A0A096LNI7 61 aa8.34□□□□□ -1.07
EXOSC3-207ENST00000490516 GCGP01275 180 aa8.34□□□□□ -1.07
EXOSC3-207ENST00000490516 IFNA7P01567 189 aa8.34□□□□□ -1.07
EXOSC3-207ENST00000490516 S100A10P60903 97 aa8.34□□□□□ -1.07
EXOSC3-207ENST00000490516 RBX1P62877 108 aa8.34□□□□□ -1.07
EXOSC3-207ENST00000490516 GNG5P63218 68 aa8.34□□□□□ -1.07
EXOSC3-207ENST00000490516 PIK3CD-AS1Q5SR53 167 aa8.34□□□□□ -1.07
EXOSC3-207ENST00000490516 RHODO00212 210 aa8.33□□□□□ -1.08
EXOSC3-207ENST00000490516 S100A11P31949 105 aa8.33□□□□□ -1.08
EXOSC3-207ENST00000490516 RAB5CP51148 216 aa8.33□□□□□ -1.08
EXOSC3-207ENST00000490516 TOMM5Q8N4H5 51 aa8.33□□□□□ -1.08
EXOSC3-207ENST00000490516 TRIM63Q969Q1 353 aa8.33□□□□□ -1.08
EXOSC3-207ENST00000490516 C11orf1Q9H5F2 150 aa8.33□□□□□ -1.08
EXOSC3-207ENST00000490516 OTORQ9NRC9 128 aa8.33□□□□□ -1.08
EXOSC3-207ENST00000490516 IGSF23A1L1A6 192 aa8.32□□□□□ -1.08
EXOSC3-207ENST00000490516 S100A4P26447 101 aaKnown RBP8.32□□□□□ -1.08
EXOSC3-207ENST00000490516 RPS10P46783 165 aaKnown RBP8.32□□□□□ -1.08
EXOSC3-207ENST00000490516 SULT1A1P50225 295 aa8.32□□□□□ -1.08
EXOSC3-207ENST00000490516 REG3AQ06141 175 aa8.32□□□□□ -1.08
EXOSC3-207ENST00000490516 THAP6Q8TBB0 222 aa8.32□□□□□ -1.08
EXOSC3-207ENST00000490516 TRBV10-1A0A0K0K1A3 114 aa8.31□□□□□ -1.08
EXOSC3-207ENST00000490516 EIF3GO75821 320 aaKnown RBP eCLIP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms