RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 KHDC3LQ587J8 217 aa9.1□□□□□ -0.95
VARS-227ENST00000489979 ZNF506Q5JVG8 444 aa9.1□□□□□ -0.95
VARS-227ENST00000489979 C9orf85Q96MD7 179 aa9.1□□□□□ -0.95
VARS-227ENST00000489979 SH3BGRL3Q9H299 93 aa9.1□□□□□ -0.95
VARS-227ENST00000489979 C11orf21Q9P2W6 132 aa9.1□□□□□ -0.95
VARS-227ENST00000489979 LINC00694P0DN24 101 aa9.09□□□□□ -0.95
VARS-227ENST00000489979 TAS2R45P59539 299 aa9.09□□□□□ -0.95
VARS-227ENST00000489979 FFAR4Q5NUL3 377 aa9.09□□□□□ -0.95
VARS-227ENST00000489979 FAM74A1Q5RGS3 127 aa9.09□□□□□ -0.95
VARS-227ENST00000489979 DAZAP1Q96EP5 407 aaKnown RBP9.09□□□□□ -0.95
VARS-227ENST00000489979 MBD2Q9UBB5 411 aa9.09□□□□□ -0.95
VARS-227ENST00000489979 LRP2P98164 4655 aa9.08□□□□□ -0.96
VARS-227ENST00000489979 ZNF80P51504 273 aaPredicted RBP9.08□□□□□ -0.96
VARS-227ENST00000489979 GNG5P63218 68 aa9.08□□□□□ -0.96
VARS-227ENST00000489979 TMEM75Q8N9X5 138 aa9.08□□□□□ -0.96
VARS-227ENST00000489979 SGK494Q96LW2 274 aa9.08□□□□□ -0.96
VARS-227ENST00000489979 OR5AC2Q9NZP5 309 aa9.08□□□□□ -0.96
VARS-227ENST00000489979 Q9UF83 564 aa9.08□□□□□ -0.96
VARS-227ENST00000489979 RNF213Q63HN8 5207 aa9.07□□□□□ -0.96
VARS-227ENST00000489979 IGLV2-11P01706 119 aa9.07□□□□□ -0.96
VARS-227ENST00000489979 ARL6IP6Q8N6S5 226 aa9.07□□□□□ -0.96
VARS-227ENST00000489979 CYB561D1Q8N8Q1 229 aa9.07□□□□□ -0.96
VARS-227ENST00000489979 PTH2Q96A98 100 aa9.07□□□□□ -0.96
VARS-227ENST00000489979 PARLQ9H300 379 aa9.07□□□□□ -0.96
VARS-227ENST00000489979 KLK12Q9UKR0 248 aa9.07□□□□□ -0.96
VARS-227ENST00000489979 URGCP-MRPS24S4R325 110 aa9.07□□□□□ -0.96
VARS-227ENST00000489979 TNXBP22105 4242 aa9.07□□□□□ -0.96
VARS-227ENST00000489979 A0A087WWC5 75 aa9.06□□□□□ -0.96
VARS-227ENST00000489979 RNASE3P12724 160 aaKnown RBP9.06□□□□□ -0.96
VARS-227ENST00000489979 NIT1Q86X76 327 aa9.06□□□□□ -0.96
VARS-227ENST00000489979 OR2T35Q8NGX2 323 aa9.06□□□□□ -0.96
VARS-227ENST00000489979 UBE2WQ96B02 151 aa9.06□□□□□ -0.96
VARS-227ENST00000489979 NDFIP1Q9BT67 221 aa9.06□□□□□ -0.96
VARS-227ENST00000489979 SAMD10Q9BYL1 202 aa9.06□□□□□ -0.96
VARS-227ENST00000489979 H0YIZ8 118 aa9.05□□□□□ -0.96
VARS-227ENST00000489979 TAAR5O14804 337 aa9.05□□□□□ -0.96
VARS-227ENST00000489979 SIX6O95475 246 aa9.05□□□□□ -0.96
VARS-227ENST00000489979 GCGP01275 180 aa9.05□□□□□ -0.96
VARS-227ENST00000489979 SEC11BP0C7V7 166 aa9.05□□□□□ -0.96
VARS-227ENST00000489979 MT1HL1P0DM35 61 aa9.05□□□□□ -0.96
VARS-227ENST00000489979 LRRC37A5PQ49AS3 106 aa9.05□□□□□ -0.96
VARS-227ENST00000489979 ZFP2Q6ZN57 461 aa9.05□□□□□ -0.96
VARS-227ENST00000489979 C14orf178Q8N769 122 aaPredicted RBP9.05□□□□□ -0.96
VARS-227ENST00000489979 A8MWV9 139 aa9.04□□□□□ -0.96
VARS-227ENST00000489979 INMT-MINDY4F8WBC2 141 aa9.04□□□□□ -0.96
VARS-227ENST00000489979 FGF8P55075 233 aaPredicted RBP9.04□□□□□ -0.96
VARS-227ENST00000489979 LGALSLQ3ZCW2 172 aaPredicted RBP9.04□□□□□ -0.96
VARS-227ENST00000489979 LINC00479Q96M42 142 aa9.04□□□□□ -0.96
VARS-227ENST00000489979 IFITM3Q01628 133 aa9.03□□□□□ -0.96
VARS-227ENST00000489979 PQLC2Q6ZP29 291 aa9.03□□□□□ -0.96
VARS-227ENST00000489979 JPT2Q9H910 190 aa9.03□□□□□ -0.96
VARS-227ENST00000489979 PTTG1O95997 202 aa9.02□□□□□ -0.97
VARS-227ENST00000489979 C14orf177Q52M58 125 aa9.02□□□□□ -0.97
VARS-227ENST00000489979 UFSP1Q6NVU6 142 aa9.02□□□□□ -0.97
VARS-227ENST00000489979 ATRAIDQ6UW56 229 aa9.02□□□□□ -0.97
VARS-227ENST00000489979 SCGB1C1Q8TD33 95 aa9.02□□□□□ -0.97
VARS-227ENST00000489979 PSG8Q9UQ74 426 aa9.02□□□□□ -0.97
VARS-227ENST00000489979 A0A087WX48 190 aa9.01□□□□□ -0.97
VARS-227ENST00000489979 SERTM2A0A1B0GWG4 89 aa9.01□□□□□ -0.97
VARS-227ENST00000489979 A0A1W2PPV4 95 aa9.01□□□□□ -0.97
VARS-227ENST00000489979 HMGB3O15347 200 aaKnown RBP9.01□□□□□ -0.97
VARS-227ENST00000489979 SSNA1O43805 119 aa9.01□□□□□ -0.97
VARS-227ENST00000489979 TCRAP04437 139 aa9.01□□□□□ -0.97
VARS-227ENST00000489979 ELOBQ15370 118 aa9.01□□□□□ -0.97
VARS-227ENST00000489979 SMUG1Q53HV7 270 aa9.01□□□□□ -0.97
VARS-227ENST00000489979 OR10G9Q8NGN4 311 aa9.01□□□□□ -0.97
VARS-227ENST00000489979 MARVELD1Q9BSK0 173 aa9.01□□□□□ -0.97
VARS-227ENST00000489979 SMIM3Q9BZL3 60 aa9.01□□□□□ -0.97
VARS-227ENST00000489979 S100A4P26447 101 aaKnown RBP9□□□□□ -0.97
VARS-227ENST00000489979 CYCSP99999 105 aaKnown RBP9□□□□□ -0.97
VARS-227ENST00000489979 Q0VG73 95 aa9□□□□□ -0.97
VARS-227ENST00000489979 ZFP69Q49AA0 526 aa9□□□□□ -0.97
VARS-227ENST00000489979 PIK3CD-AS1Q5SR53 167 aa9□□□□□ -0.97
VARS-227ENST00000489979 KCNIP4Q6PIL6 250 aa9□□□□□ -0.97
VARS-227ENST00000489979 PRNTQ86SH4 94 aa9□□□□□ -0.97
VARS-227ENST00000489979 CHCHD7Q9BUK0 85 aa9□□□□□ -0.97
VARS-227ENST00000489979 HSPB11Q9Y547 144 aa9□□□□□ -0.97
VARS-227ENST00000489979 IGKV3D-20A0A0C4DH25 116 aa8.99□□□□□ -0.97
VARS-227ENST00000489979 RAB2AP61019 212 aa8.99□□□□□ -0.97
VARS-227ENST00000489979 FLI1Q01543 452 aaPredicted RBP8.99□□□□□ -0.97
VARS-227ENST00000489979 DMRTA1Q5VZB9 504 aa8.99□□□□□ -0.97
VARS-227ENST00000489979 C5orf17Q8NAS9 161 aa8.99□□□□□ -0.97
VARS-227ENST00000489979 C1orf43Q9BWL3 253 aa8.99□□□□□ -0.97
VARS-227ENST00000489979 K7EQM0 130 aa8.98□□□□□ -0.97
VARS-227ENST00000489979 ARL14EPLP0DKL9 152 aa8.98□□□□□ -0.97
VARS-227ENST00000489979 RGS21Q2M5E4 152 aa8.98□□□□□ -0.97
VARS-227ENST00000489979 Q6ZRU5 148 aa8.98□□□□□ -0.97
VARS-227ENST00000489979 OR2G3Q8NGZ4 309 aa8.98□□□□□ -0.97
VARS-227ENST00000489979 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.98□□□□□ -0.97
VARS-227ENST00000489979 USP17L23D6RBM5 183 aa8.97□□□□□ -0.97
VARS-227ENST00000489979 TMEM262E9PQX1 116 aa8.97□□□□□ -0.97
VARS-227ENST00000489979 PANO1I0J062 215 aa8.97□□□□□ -0.97
VARS-227ENST00000489979 RHODO00212 210 aa8.97□□□□□ -0.97
VARS-227ENST00000489979 PET100P0DJ07 73 aa8.97□□□□□ -0.97
VARS-227ENST00000489979 ASIPP42127 132 aa8.97□□□□□ -0.97
VARS-227ENST00000489979 FAM74A4Q5TZK3 123 aa8.97□□□□□ -0.97
VARS-227ENST00000489979 ENHOQ6UWT2 76 aa8.97□□□□□ -0.97
VARS-227ENST00000489979 OR10G7Q8NGN6 311 aa8.97□□□□□ -0.97
VARS-227ENST00000489979 PPP1R1CQ8WVI7 109 aa8.97□□□□□ -0.97
VARS-227ENST00000489979 WFDC1Q9HC57 220 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms