RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 TMEM167BQ9NRX6 74 aa8.47□□□□□ -1.05
SREBF1-215ENST00000487401 PSG8Q9UQ74 426 aa8.47□□□□□ -1.05
SREBF1-215ENST00000487401 FBLL1A6NHQ2 334 aaKnown RBP8.46□□□□□ -1.06
SREBF1-215ENST00000487401 GATA1P15976 413 aaPredicted RBP8.46□□□□□ -1.06
SREBF1-215ENST00000487401 PPT1P50897 306 aa8.46□□□□□ -1.06
SREBF1-215ENST00000487401 SUMO1P63165 101 aaKnown RBP8.46□□□□□ -1.06
SREBF1-215ENST00000487401 ZNF876PQ49A33 203 aa8.46□□□□□ -1.06
SREBF1-215ENST00000487401 SMUG1Q53HV7 270 aa8.46□□□□□ -1.06
SREBF1-215ENST00000487401 WFDC10BQ8IUB3 73 aa8.46□□□□□ -1.06
SREBF1-215ENST00000487401 Q8N1X5 172 aa8.46□□□□□ -1.06
SREBF1-215ENST00000487401 SCRT2Q9NQ03 307 aa8.46□□□□□ -1.06
SREBF1-215ENST00000487401 MSRB1Q9NZV6 116 aa8.46□□□□□ -1.06
SREBF1-215ENST00000487401 EPDR1Q9UM22 224 aa8.46□□□□□ -1.06
SREBF1-215ENST00000487401 LOC100131303A0A0U1RQF7 123 aa8.45□□□□□ -1.06
SREBF1-215ENST00000487401 TMEM218A2RU14 115 aa8.45□□□□□ -1.06
SREBF1-215ENST00000487401 GCGP01275 180 aa8.45□□□□□ -1.06
SREBF1-215ENST00000487401 CRYGDP07320 174 aa8.45□□□□□ -1.06
SREBF1-215ENST00000487401 PFN1P07737 140 aaKnown RBP8.45□□□□□ -1.06
SREBF1-215ENST00000487401 DNAH10OSP0CZ25 163 aa8.45□□□□□ -1.06
SREBF1-215ENST00000487401 FLI1Q01543 452 aaPredicted RBP8.45□□□□□ -1.06
SREBF1-215ENST00000487401 PRNTQ86SH4 94 aa8.45□□□□□ -1.06
SREBF1-215ENST00000487401 C10orf126Q8N4M7 172 aa8.45□□□□□ -1.06
SREBF1-215ENST00000487401 PRADC1Q9BSG0 188 aa8.45□□□□□ -1.06
SREBF1-215ENST00000487401 SH3BGRL3Q9H299 93 aa8.45□□□□□ -1.06
SREBF1-215ENST00000487401 A0A087WTM6 91 aa8.44□□□□□ -1.06
SREBF1-215ENST00000487401 BORCS7-ASMTA0A0B4J1R7 106 aa8.44□□□□□ -1.06
SREBF1-215ENST00000487401 RS1O15537 224 aa8.44□□□□□ -1.06
SREBF1-215ENST00000487401 CIDEAO60543 219 aa8.44□□□□□ -1.06
SREBF1-215ENST00000487401 APOC3P02656 99 aa8.44□□□□□ -1.06
SREBF1-215ENST00000487401 ZNF80P51504 273 aaPredicted RBP8.44□□□□□ -1.06
SREBF1-215ENST00000487401 TIRAPP58753 221 aa8.44□□□□□ -1.06
SREBF1-215ENST00000487401 BLOC1S1P78537 153 aa8.44□□□□□ -1.06
SREBF1-215ENST00000487401 SAPCD1Q5SSQ6 148 aa8.44□□□□□ -1.06
SREBF1-215ENST00000487401 CFAP126Q5VTH2 177 aa8.44□□□□□ -1.06
SREBF1-215ENST00000487401 CDPF1Q6NVV7 123 aa8.44□□□□□ -1.06
SREBF1-215ENST00000487401 CYB561D1Q8N8Q1 229 aa8.44□□□□□ -1.06
SREBF1-215ENST00000487401 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.44□□□□□ -1.06
SREBF1-215ENST00000487401 C11orf21Q9P2W6 132 aa8.44□□□□□ -1.06
SREBF1-215ENST00000487401 IGHV3-73A0A0B4J1V6 119 aa8.43□□□□□ -1.06
SREBF1-215ENST00000487401 TRAV8-6A0A0B4J262 113 aa8.43□□□□□ -1.06
SREBF1-215ENST00000487401 GGTLC3B5MD39 225 aa8.43□□□□□ -1.06
SREBF1-215ENST00000487401 FUSP35637 526 aaKnown RBP eCLIP8.43□□□□□ -1.06
SREBF1-215ENST00000487401 SULT1A2P50226 295 aa8.43□□□□□ -1.06
SREBF1-215ENST00000487401 RHOHQ15669 191 aa8.43□□□□□ -1.06
SREBF1-215ENST00000487401 C10orf91Q5T1B1 145 aa8.43□□□□□ -1.06
SREBF1-215ENST00000487401 RPL7L1Q6DKI1 246 aaKnown RBP8.43□□□□□ -1.06
SREBF1-215ENST00000487401 ATRAIDQ6UW56 229 aa8.43□□□□□ -1.06
SREBF1-215ENST00000487401 SLC25A29Q8N8R3 303 aa8.43□□□□□ -1.06
SREBF1-215ENST00000487401 TMEM75Q8N9X5 138 aa8.43□□□□□ -1.06
SREBF1-215ENST00000487401 IGHV3-38A0A0C4DH36 116 aa8.42□□□□□ -1.06
SREBF1-215ENST00000487401 A0A1W2PRE2 83 aa8.42□□□□□ -1.06
SREBF1-215ENST00000487401 IGLV2-11P01706 119 aa8.42□□□□□ -1.06
SREBF1-215ENST00000487401 S100A4P26447 101 aaKnown RBP8.42□□□□□ -1.06
SREBF1-215ENST00000487401 OR10J3Q5JRS4 329 aa8.42□□□□□ -1.06
SREBF1-215ENST00000487401 PTH2Q96A98 100 aa8.42□□□□□ -1.06
SREBF1-215ENST00000487401 CARHSP1Q9Y2V2 147 aaKnown RBP8.42□□□□□ -1.06
SREBF1-215ENST00000487401 TRAV34A0A0B4J273 112 aa8.41□□□□□ -1.06
SREBF1-215ENST00000487401 TRBV6-4A0A1B0GX49 114 aa8.41□□□□□ -1.06
SREBF1-215ENST00000487401 PGPEP1LA6NFU8 196 aa8.41□□□□□ -1.06
SREBF1-215ENST00000487401 PSCAO43653 123 aa8.41□□□□□ -1.06
SREBF1-215ENST00000487401 DPPA3Q6W0C5 159 aa8.41□□□□□ -1.06
SREBF1-215ENST00000487401 LINC00479Q96M42 142 aa8.41□□□□□ -1.06
SREBF1-215ENST00000487401 C9orf85Q96MD7 179 aa8.41□□□□□ -1.06
SREBF1-215ENST00000487401 NKX6-2Q9C056 277 aaPredicted RBP8.41□□□□□ -1.06
SREBF1-215ENST00000487401 CTXND1A0A1B0GTU2 59 aa8.4□□□□□ -1.06
SREBF1-215ENST00000487401 SEC11BP0C7V7 166 aa8.4□□□□□ -1.06
SREBF1-215ENST00000487401 MGST1P10620 155 aaKnown RBP8.4□□□□□ -1.06
SREBF1-215ENST00000487401 UBE2G2P60604 165 aa8.4□□□□□ -1.06
SREBF1-215ENST00000487401 LINC01556Q5JQF7 62 aa8.4□□□□□ -1.06
SREBF1-215ENST00000487401 ZNF506Q5JVG8 444 aa8.4□□□□□ -1.06
SREBF1-215ENST00000487401 AKR1C8PQ5T2L2 129 aa8.4□□□□□ -1.06
SREBF1-215ENST00000487401 SVBPQ8N300 66 aa8.4□□□□□ -1.06
SREBF1-215ENST00000487401 MUC4Q99102 2169 aa8.39□□□□□ -1.07
SREBF1-215ENST00000487401 FABP5P3A8MUU1 101 aa8.39□□□□□ -1.07
SREBF1-215ENST00000487401 PEX7O00628 323 aa8.39□□□□□ -1.07
SREBF1-215ENST00000487401 RNASE3P12724 160 aaKnown RBP8.39□□□□□ -1.07
SREBF1-215ENST00000487401 ASIPP42127 132 aa8.39□□□□□ -1.07
SREBF1-215ENST00000487401 LELP1Q5T871 98 aa8.39□□□□□ -1.07
SREBF1-215ENST00000487401 ATP6V0E2Q8NHE4 81 aa8.39□□□□□ -1.07
SREBF1-215ENST00000487401 LYPD6BQ8NI32 183 aa8.39□□□□□ -1.07
SREBF1-215ENST00000487401 SEC11CQ9BY50 192 aa8.39□□□□□ -1.07
SREBF1-215ENST00000487401 ARL2-SNX15V9GYD0 113 aa8.39□□□□□ -1.07
SREBF1-215ENST00000487401 A8MWV9 139 aa8.38□□□□□ -1.07
SREBF1-215ENST00000487401 IBA57-AS1B1ANH7 110 aa8.38□□□□□ -1.07
SREBF1-215ENST00000487401 EPM2AB3EWF7 344 aa8.38□□□□□ -1.07
SREBF1-215ENST00000487401 F8W036 122 aa8.38□□□□□ -1.07
SREBF1-215ENST00000487401 IGHV3-30P01768 117 aa8.38□□□□□ -1.07
SREBF1-215ENST00000487401 IGHV3-33P01772 117 aa8.38□□□□□ -1.07
SREBF1-215ENST00000487401 H2AFB1P0C5Y9 115 aa8.38□□□□□ -1.07
SREBF1-215ENST00000487401 IGHV3-30-3P0DP02 117 aa8.38□□□□□ -1.07
SREBF1-215ENST00000487401 IGHV3-30-5P0DP03 117 aa8.38□□□□□ -1.07
SREBF1-215ENST00000487401 ADCYAP1P18509 176 aa8.38□□□□□ -1.07
SREBF1-215ENST00000487401 GCSHP23434 173 aa8.38□□□□□ -1.07
SREBF1-215ENST00000487401 RAB5CP51148 216 aa8.38□□□□□ -1.07
SREBF1-215ENST00000487401 FGF8P55075 233 aaPredicted RBP8.38□□□□□ -1.07
SREBF1-215ENST00000487401 SRSF3P84103 164 aaKnown RBP8.38□□□□□ -1.07
SREBF1-215ENST00000487401 ZNF726P1Q15940 193 aa8.38□□□□□ -1.07
SREBF1-215ENST00000487401 HIST1H2BAQ96A08 127 aa8.38□□□□□ -1.07
SREBF1-215ENST00000487401 GTSF1LQ9H1H1 148 aa8.38□□□□□ -1.07
SREBF1-215ENST00000487401 Q9HAA7 133 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms