RNA–Protein interactions for RNA: ENST00000486960.5

SF1-217, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-217ENST00000486960 CXCL1P09341 107 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 INAFM2P0DMQ5 153 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 FABP4P15090 132 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 HOXB6P17509 224 aaKnown RBP4.04□□□□□ -1.76
SF1-217ENST00000486960 SNCAP37840 140 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 HMGA2P52926 109 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 GNB2P62879 340 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 PRR4Q16378 134 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 REG3GQ6UW15 175 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 UNQ5815/PRO19632Q6UWF5 114 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 SCXQ7RTU7 201 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 NFE4Q86UQ8 179 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 TEN1Q86WV5 123 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 BPIFA4PQ86YQ2 179 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 GPHB5Q86YW7 130 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 ATP6V0E2Q8NHE4 81 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 PFN4Q8NHR9 129 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 PRAC1Q96KF2 57 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 PARLQ9H300 379 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 NPVFQ9HCQ7 196 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 C21orf62Q9NYP8 219 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 LINC00312Q9Y6C7 94 aa4.04□□□□□ -1.76
SF1-217ENST00000486960 NCKAP5O14513 1909 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 RNF213Q63HN8 5207 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 DOCK7Q96N67 2140 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 NINQ8N4C6 2090 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 IGHV4-30-2A0A087WSY4 118 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 IGLV3-32A0A0A0MS00 114 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 IGKV1D-43A0A0B4J1Z2 117 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 A0A1B0GW54 56 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 EPM2AB3EWF7 344 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 M0R2P5 195 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 GNGT2O14610 69 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 ZNF253O75346 499 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 IGLV2-8P01709 118 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 CD7P09564 240 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 FXYD6P3P58550 94 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 YPEL3P61236 119 aaPredicted RBP4.03□□□□□ -1.76
SF1-217ENST00000486960 CCL20P78556 96 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 Q0VG73 95 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 FHL1Q13642 323 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 LGALS9BQ3B8N2 356 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 OR2T2Q6IF00 324 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 TMEM91Q6ZNR0 172 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 PHF5AQ7RTV0 110 aaKnown RBP4.03□□□□□ -1.76
SF1-217ENST00000486960 FAM57AQ8TBR7 257 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 ZNF431Q8TF32 576 aaPredicted RBP4.03□□□□□ -1.76
SF1-217ENST00000486960 POP5Q969H6 163 aaKnown RBP4.03□□□□□ -1.76
SF1-217ENST00000486960 PRELID3AQ96N28 172 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 HIST1H2BLQ99880 126 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 PYGO2Q9BRQ0 406 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 KRTAP9-2Q9BYQ4 174 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 GABARAPL1Q9H0R8 117 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 SLC39A9Q9NUM3 307 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 HMCN2Q8NDA2 5059 aa4.03□□□□□ -1.76
SF1-217ENST00000486960 SRRM2Q9UQ35 2752 aaKnown RBP4.02□□□□□ -1.77
SF1-217ENST00000486960 FAT2Q9NYQ8 4349 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 RPL37AP8A6NKH3 93 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 C9JCJ5 164 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 F8W1H4 67 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 SYNGR2O43760 224 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 HIST1H2BKO60814 126 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 PPP1R3DO95685 299 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 CYB5AP00167 134 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 SLC25A5P05141 298 aaKnown RBP4.02□□□□□ -1.77
SF1-217ENST00000486960 HIST1H2BJP06899 126 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 MPGP29372 298 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 TAS2R45P59539 299 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 CXCL6P80162 114 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 FOXF1Q12946 379 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 HMGN3Q15651 99 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 RSPO1Q2MKA7 263 aaPredicted RBP4.02□□□□□ -1.77
SF1-217ENST00000486960 TMEM155Q4W5P6 130 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 ADAMTSL4-AS1Q5T5F5 129 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 FAM53AQ6NSI3 398 aaPredicted RBP4.02□□□□□ -1.77
SF1-217ENST00000486960 Q6ZRP5 223 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 ZNF101Q8IZC7 436 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 ZNF645Q8N7E2 425 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 OR10G2Q8NGC3 310 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 RMI2Q96E14 147 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 YPEL2Q96QA6 119 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 KRTAP4-8Q9BYQ9 185 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 HEXA-AS1Q9H8Q6 139 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 SERP1Q9Y6X1 66 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 DNAH11Q96DT5 4516 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 MYCBP2O75592 4640 aa4.02□□□□□ -1.77
SF1-217ENST00000486960 IGHV3OR16-10A0A075B7F0 116 aa4.01□□□□□ -1.77
SF1-217ENST00000486960 FAM24AA6NFZ4 105 aa4.01□□□□□ -1.77
SF1-217ENST00000486960 MCRIP1C9JLW8 97 aa4.01□□□□□ -1.77
SF1-217ENST00000486960 H3BT86 120 aa4.01□□□□□ -1.77
SF1-217ENST00000486960 SNCGO76070 127 aa4.01□□□□□ -1.77
SF1-217ENST00000486960 RBP4P02753 201 aa4.01□□□□□ -1.77
SF1-217ENST00000486960 MT-ATP8P03928 68 aa4.01□□□□□ -1.77
SF1-217ENST00000486960 PRM2P04554 102 aa4.01□□□□□ -1.77
SF1-217ENST00000486960 ZNF823P16415 610 aa4.01□□□□□ -1.77
SF1-217ENST00000486960 DYNLT3P51808 116 aa4.01□□□□□ -1.77
SF1-217ENST00000486960 LSM3P62310 102 aaKnown RBP4.01□□□□□ -1.77
SF1-217ENST00000486960 SNRPD3P62318 126 aaKnown RBP4.01□□□□□ -1.77
SF1-217ENST00000486960 CASC10Q5T4H9 136 aa4.01□□□□□ -1.77
SF1-217ENST00000486960 PDPNQ86YL7 162 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms