RNA–Protein interactions for RNA: ENST00000486235.5

TMEM39A-209, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 885 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-209ENST00000486235 TMEM37Q8WXS4 190 aa4.63□□□□□ -1.67
TMEM39A-209ENST00000486235 HINT2Q9BX68 163 aa4.63□□□□□ -1.67
TMEM39A-209ENST00000486235 TMEM167BQ9NRX6 74 aa4.63□□□□□ -1.67
TMEM39A-209ENST00000486235 UQCR10Q9UDW1 63 aa4.63□□□□□ -1.67
TMEM39A-209ENST00000486235 DEFB131BA0A096LNP1 70 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 IGHV3-66A0A0C4DH42 116 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 A0A0G2JRQ6 117 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 A0A0U1RRA0 63 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 C15orf61A6NNL5 157 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 ZNF705FA8MVS1 300 aaPredicted RBP4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 H3BP45 60 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 K7EIM0 57 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 K7EQM0 130 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 GIG44P09565 113 aaPredicted RBP4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 ZNF705DP0CH99 300 aaPredicted RBP4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 ZNF705BP0CI00 300 aaPredicted RBP4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 STAG3L2P0CL84 134 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 STAG3L3P0CL85 134 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 P0DMU3 169 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 FAM231AP0DMU4 169 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 FAM231CP0DMU5 169 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 IAPPP10997 89 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 ZNF25P17030 456 aaPredicted RBP4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 FGF8P55075 233 aaPredicted RBP4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 SEC61BP60468 96 aaKnown RBP4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 RHOBP62745 196 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 WT1-ASQ06250 92 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 C12orf74Q32Q52 190 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 FAM78BQ5VT40 261 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 UBE2DNLQ8IWF7 75 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 SMIM12Q96EX1 92 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 ZNF414Q96IQ9 312 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 TMEM208Q9BTX3 173 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 Q9H8V8 135 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 CLEC5AQ9NY25 188 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 CELA1Q9UNI1 258 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 MRPS16Q9Y3D3 137 aaKnown RBP4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 LRP1BQ9NZR2 4599 aa4.62□□□□□ -1.67
TMEM39A-209ENST00000486235 TEX50A0A1B0GTY4 177 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 KNCNA6PVL3 124 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 PMS2P5A8MQ11 134 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 IGKV1-39P01597 117 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 APOHP02749 345 aaPredicted RBP4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 IGKV1D-39P04432 117 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 CTSGP08311 255 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 MIFP14174 115 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 TAS2R45P59539 299 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 ERVK-16P61578 105 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 ZNF90Q03938 601 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 ARL16Q0P5N6 197 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 LGALS9BQ3B8N2 356 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 OR8G2PQ6IF36 304 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 FAM159AQ6UWV7 190 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 ZNF705AQ6ZN79 300 aaPredicted RBP4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 Q75L30 129 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 BAGE3Q86Y29 109 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 BAGE2Q86Y30 109 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 MAPKAPK5-AS1Q8N8E1 139 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 SLC35E1Q96K37 410 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 SAMD10Q9BYL1 202 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 MS4A6AQ9H2W1 248 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 VSIRQ9H7M9 311 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 SLC25A22Q9H936 323 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 NPVFQ9HCQ7 196 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 OSTCQ9NRP0 149 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 RABAC1Q9UI14 185 aa4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 F11RQ9Y624 299 aaKnown RBP4.61□□□□□ -1.67
TMEM39A-209ENST00000486235 AGRNO00468 2067 aa4.6□□□□□ -1.67
TMEM39A-209ENST00000486235 C16orf90A8MZG2 172 aa4.6□□□□□ -1.67
TMEM39A-209ENST00000486235 ISLRO14498 428 aa4.6□□□□□ -1.67
TMEM39A-209ENST00000486235 ZNF253O75346 499 aa4.6□□□□□ -1.67
TMEM39A-209ENST00000486235 TOMM40O96008 361 aa4.6□□□□□ -1.67
TMEM39A-209ENST00000486235 IGHV3-48P01763 117 aa4.6□□□□□ -1.67
TMEM39A-209ENST00000486235 SNRPCP09234 159 aaKnown RBP4.6□□□□□ -1.67
TMEM39A-209ENST00000486235 RPL29P47914 159 aaKnown RBP4.6□□□□□ -1.67
TMEM39A-209ENST00000486235 POU2AF1Q16633 256 aa4.6□□□□□ -1.67
TMEM39A-209ENST00000486235 TIGITQ495A1 244 aa4.6□□□□□ -1.67
TMEM39A-209ENST00000486235 SAPCD1Q5SSQ6 148 aa4.6□□□□□ -1.67
TMEM39A-209ENST00000486235 Q6ZR54 194 aa4.6□□□□□ -1.67
TMEM39A-209ENST00000486235 SSX7Q7RTT5 188 aa4.6□□□□□ -1.67
TMEM39A-209ENST00000486235 ATP5L2Q7Z4Y8 100 aa4.6□□□□□ -1.67
TMEM39A-209ENST00000486235 TRPT1Q86TN4 253 aaKnown RBP4.6□□□□□ -1.67
TMEM39A-209ENST00000486235 OR1L8Q8NGR8 309 aa4.6□□□□□ -1.67
TMEM39A-209ENST00000486235 KCNS1Q96KK3 526 aa4.6□□□□□ -1.67
TMEM39A-209ENST00000486235 A0A1W2PRE2 83 aa4.59□□□□□ -1.67
TMEM39A-209ENST00000486235 K7EP13 123 aa4.59□□□□□ -1.67
TMEM39A-209ENST00000486235 GPX1P07203 203 aa4.59□□□□□ -1.67
TMEM39A-209ENST00000486235 ZNF688P0C7X2 276 aa4.59□□□□□ -1.67
TMEM39A-209ENST00000486235 PMCHP20382 165 aa4.59□□□□□ -1.67
TMEM39A-209ENST00000486235 PSMG4Q5JS54 123 aa4.59□□□□□ -1.67
TMEM39A-209ENST00000486235 C1orf134Q5TEV5 83 aa4.59□□□□□ -1.67
TMEM39A-209ENST00000486235 FAM231DQ6ZW35 169 aa4.59□□□□□ -1.67
TMEM39A-209ENST00000486235 ZNF738Q8NE65 137 aa4.59□□□□□ -1.67
TMEM39A-209ENST00000486235 STXBP6Q8NFX7 210 aa4.59□□□□□ -1.67
TMEM39A-209ENST00000486235 BORCS7Q96B45 105 aa4.59□□□□□ -1.67
TMEM39A-209ENST00000486235 MRPL32Q9BYC8 188 aaKnown RBP4.59□□□□□ -1.67
TMEM39A-209ENST00000486235 NDUFA4L2Q9NRX3 87 aa4.59□□□□□ -1.67
TMEM39A-209ENST00000486235 OR51B2Q9Y5P1 312 aa4.59□□□□□ -1.67
TMEM39A-209ENST00000486235 I3L2K1 104 aa4.58□□□□□ -1.68
TMEM39A-209ENST00000486235 GNG7O60262 68 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 168.3 ms