RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 KLK9Q9UKQ9 250 aa1.37□□□□□ -2.19
LAPTM4A-202ENST00000483117 C22orf24Q9Y442 160 aa1.37□□□□□ -2.19
LAPTM4A-202ENST00000483117 COL4A2P08572 1712 aa1.37□□□□□ -2.19
LAPTM4A-202ENST00000483117 SHANK1Q9Y566 2161 aa1.37□□□□□ -2.19
LAPTM4A-202ENST00000483117 GAPVD1Q14C86 1478 aa1.37□□□□□ -2.19
LAPTM4A-202ENST00000483117 MYH1P12882 1939 aa1.36□□□□□ -2.19
LAPTM4A-202ENST00000483117 TRBV6-8A0A0A6YYG3 113 aa1.36□□□□□ -2.19
LAPTM4A-202ENST00000483117 TRBV10-1A0A0K0K1A3 114 aa1.36□□□□□ -2.19
LAPTM4A-202ENST00000483117 TMEM30CPA0ZSE6 113 aa1.36□□□□□ -2.19
LAPTM4A-202ENST00000483117 NUPR1O60356 82 aa1.36□□□□□ -2.19
LAPTM4A-202ENST00000483117 P0C880 135 aa1.36□□□□□ -2.19
LAPTM4A-202ENST00000483117 C9orf116Q5BN46 136 aaPredicted RBP1.36□□□□□ -2.19
LAPTM4A-202ENST00000483117 BRD3OSQ6XYD6 125 aa1.36□□□□□ -2.19
LAPTM4A-202ENST00000483117 HEATR5AQ86XA9 2040 aa1.36□□□□□ -2.19
LAPTM4A-202ENST00000483117 SBSPONQ8IVN8 264 aa1.36□□□□□ -2.19
LAPTM4A-202ENST00000483117 Q8N8P6 123 aa1.36□□□□□ -2.19
LAPTM4A-202ENST00000483117 SPACA4Q8TDM5 124 aa1.36□□□□□ -2.19
LAPTM4A-202ENST00000483117 DMAC1Q96GE9 116 aa1.36□□□□□ -2.19
LAPTM4A-202ENST00000483117 TTTY12Q9BZ98 90 aa1.36□□□□□ -2.19
LAPTM4A-202ENST00000483117 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.36□□□□□ -2.19
LAPTM4A-202ENST00000483117 SCP2D1Q9UJQ7 156 aa1.36□□□□□ -2.19
LAPTM4A-202ENST00000483117 MYH6P13533 1939 aa1.36□□□□□ -2.19
LAPTM4A-202ENST00000483117 PXDNLA1KZ92 1463 aa1.36□□□□□ -2.19
LAPTM4A-202ENST00000483117 MYH9P35579 1960 aaKnown RBP1.36□□□□□ -2.19
LAPTM4A-202ENST00000483117 KIAA1549LQ6ZVL6 1849 aa1.36□□□□□ -2.19
LAPTM4A-202ENST00000483117 ARHGAP5Q13017 1502 aa1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 MGAMO43451 1857 aa1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 CPSF1Q10570 1443 aaKnown RBP1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 LAMB4A4D0S4 1761 aa1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 TRAV17A0A0B4J275 112 aa1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 TRBV10-3A0A0K0K1G6 114 aa1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 CXorf51AA0A1B0GTR3 108 aa1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 TRBV6-4A0A1B0GX49 114 aa1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 SDHAF1A6NFY7 115 aa1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 MPC2O95563 127 aa1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 IGHV3-30P01768 117 aa1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 IGHV3-30-5P0DP03 117 aa1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 KRTDAPP60985 99 aa1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 UBA52P62987 128 aaKnown RBP1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 COMMD6Q7Z4G1 85 aa1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 FAIMQ9NVQ4 179 aa1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 MED9Q9NWA0 146 aa1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 MRPL35Q9NZE8 188 aaKnown RBP1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 TANC2Q9HCD6 1990 aa1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 CCDC18Q5T9S5 1454 aa1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 MAGI1Q96QZ7 1491 aaPredicted RBP1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 ZSWIM8A7E2V4 1837 aa1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 KIF13AQ9H1H9 1805 aa1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 COL4A5P29400 1685 aa1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 ADAMTS7Q9UKP4 1686 aa1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 SPHKAPQ2M3C7 1700 aa1.35□□□□□ -2.19
LAPTM4A-202ENST00000483117 NCKAP5O14513 1909 aa1.34□□□□□ -2.19
LAPTM4A-202ENST00000483117 AKAP11Q9UKA4 1901 aa1.34□□□□□ -2.19
LAPTM4A-202ENST00000483117 MYH13Q9UKX3 1938 aa1.34□□□□□ -2.19
LAPTM4A-202ENST00000483117 BAZ1AQ9NRL2 1556 aaPredicted RBP1.34□□□□□ -2.19
LAPTM4A-202ENST00000483117 AKAP12Q02952 1782 aa1.34□□□□□ -2.19
LAPTM4A-202ENST00000483117 SHROOM3Q8TF72 1996 aa1.34□□□□□ -2.19
LAPTM4A-202ENST00000483117 C10orf71Q711Q0 1435 aa1.34□□□□□ -2.19
LAPTM4A-202ENST00000483117 SLC25A6P12236 298 aa1.34□□□□□ -2.19
LAPTM4A-202ENST00000483117 MPV17LQ2QL34 196 aa1.34□□□□□ -2.19
LAPTM4A-202ENST00000483117 LYPD5Q6UWN5 251 aa1.34□□□□□ -2.19
LAPTM4A-202ENST00000483117 C9orf62Q8N4C0 152 aa1.34□□□□□ -2.19
LAPTM4A-202ENST00000483117 C10orf105Q8TEF2 133 aa1.34□□□□□ -2.19
LAPTM4A-202ENST00000483117 DSCR8Q96T75 97 aa1.34□□□□□ -2.19
LAPTM4A-202ENST00000483117 VAMP8Q9BV40 100 aa1.34□□□□□ -2.19
LAPTM4A-202ENST00000483117 CYP4F30PQ9H0H9 118 aa1.34□□□□□ -2.19
LAPTM4A-202ENST00000483117 DPH3P1Q9H4G8 78 aa1.34□□□□□ -2.19
LAPTM4A-202ENST00000483117 ARHGAP32A7KAX9 2087 aa1.34□□□□□ -2.19
LAPTM4A-202ENST00000483117 COL11A1P12107 1806 aaPredicted RBP1.33□□□□□ -2.2
LAPTM4A-202ENST00000483117 CUL9Q8IWT3 2517 aa1.33□□□□□ -2.2
LAPTM4A-202ENST00000483117 OTOGLQ3ZCN5 2332 aa1.33□□□□□ -2.2
LAPTM4A-202ENST00000483117 HELZP42694 1942 aaKnown RBP1.33□□□□□ -2.2
LAPTM4A-202ENST00000483117 MED14O60244 1454 aa1.33□□□□□ -2.2
LAPTM4A-202ENST00000483117 ANKRD26Q9UPS8 1709 aa1.33□□□□□ -2.2
LAPTM4A-202ENST00000483117 NUPR2A6NF83 97 aa1.33□□□□□ -2.2
LAPTM4A-202ENST00000483117 INE1O15225 51 aa1.33□□□□□ -2.2
LAPTM4A-202ENST00000483117 MRPS14O60783 128 aaKnown RBP1.33□□□□□ -2.2
LAPTM4A-202ENST00000483117 RNASE3P12724 160 aaKnown RBP1.33□□□□□ -2.2
LAPTM4A-202ENST00000483117 UBE2G1P62253 170 aa1.33□□□□□ -2.2
LAPTM4A-202ENST00000483117 CCL8P80075 99 aa1.33□□□□□ -2.2
LAPTM4A-202ENST00000483117 ZNF818PQ6ZRF7 136 aa1.33□□□□□ -2.2
LAPTM4A-202ENST00000483117 COA5Q86WW8 74 aa1.33□□□□□ -2.2
LAPTM4A-202ENST00000483117 C15orf53Q8NAA6 179 aa1.33□□□□□ -2.2
LAPTM4A-202ENST00000483117 MYOZ3Q8TDC0 251 aa1.33□□□□□ -2.2
LAPTM4A-202ENST00000483117 SNURFQ9Y675 71 aa1.33□□□□□ -2.2
LAPTM4A-202ENST00000483117 LRP5O75197 1615 aa1.33□□□□□ -2.2
LAPTM4A-202ENST00000483117 CACNA1DQ01668 2161 aa1.32□□□□□ -2.2
LAPTM4A-202ENST00000483117 PTPRMP28827 1452 aa1.32□□□□□ -2.2
LAPTM4A-202ENST00000483117 RBBP6Q7Z6E9 1792 aaKnown RBP1.32□□□□□ -2.2
LAPTM4A-202ENST00000483117 ABCC3O15438 1527 aa1.32□□□□□ -2.2
LAPTM4A-202ENST00000483117 ADGRB3O60242 1522 aa1.32□□□□□ -2.2
LAPTM4A-202ENST00000483117 TRAV23DV6A0A075B6W5 121 aa1.32□□□□□ -2.2
LAPTM4A-202ENST00000483117 TRBV6-5A0A0K0K1A5 114 aa1.32□□□□□ -2.2
LAPTM4A-202ENST00000483117 TEX49A0A1B0GTD5 131 aa1.32□□□□□ -2.2
LAPTM4A-202ENST00000483117 NAP1L6A6NFF2 107 aa1.32□□□□□ -2.2
LAPTM4A-202ENST00000483117 JMJD7-PLA2G4BH0Y9G9 81 aa1.32□□□□□ -2.2
LAPTM4A-202ENST00000483117 M0R2N4 97 aa1.32□□□□□ -2.2
LAPTM4A-202ENST00000483117 IL7P13232 177 aa1.32□□□□□ -2.2
LAPTM4A-202ENST00000483117 PDE6GP18545 87 aa1.32□□□□□ -2.2
LAPTM4A-202ENST00000483117 ASIPP42127 132 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms