RNA–Protein interactions for RNA: ENST00000483065.1

R3HDM1-216, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-216ENST00000483065 CYTL1Q9NRR1 136 aa2.92□□□□□ -1.94
R3HDM1-216ENST00000483065 MYO10Q9HD67 2058 aa2.92□□□□□ -1.94
R3HDM1-216ENST00000483065 THADAQ6YHU6 1953 aa2.92□□□□□ -1.94
R3HDM1-216ENST00000483065 ABCC5O15440 1437 aa2.92□□□□□ -1.94
R3HDM1-216ENST00000483065 PLIN4Q96Q06 1357 aa2.91□□□□□ -1.94
R3HDM1-216ENST00000483065 TRAV23DV6A0A075B6W5 121 aa2.91□□□□□ -1.94
R3HDM1-216ENST00000483065 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
R3HDM1-216ENST00000483065 KRTAP1-4P0C5Y4 121 aa2.91□□□□□ -1.94
R3HDM1-216ENST00000483065 PRR9Q5T870 116 aa2.91□□□□□ -1.94
R3HDM1-216ENST00000483065 SPTSSBQ8NFR3 76 aa2.91□□□□□ -1.94
R3HDM1-216ENST00000483065 TRGV9Q99603 122 aa2.91□□□□□ -1.94
R3HDM1-216ENST00000483065 KIDINS220Q9ULH0 1771 aa2.91□□□□□ -1.94
R3HDM1-216ENST00000483065 CASKIN1Q8WXD9 1431 aa2.91□□□□□ -1.94
R3HDM1-216ENST00000483065 LCTP09848 1927 aa2.91□□□□□ -1.94
R3HDM1-216ENST00000483065 MYLKQ15746 1914 aa2.91□□□□□ -1.94
R3HDM1-216ENST00000483065 CCDC141Q6ZP82 1450 aa2.9□□□□□ -1.94
R3HDM1-216ENST00000483065 KDM5DQ9BY66 1539 aa2.9□□□□□ -1.95
R3HDM1-216ENST00000483065 ARHGEF12Q9NZN5 1544 aa2.9□□□□□ -1.95
R3HDM1-216ENST00000483065 A8MU10 97 aa2.9□□□□□ -1.95
R3HDM1-216ENST00000483065 SFT2D2O95562 160 aa2.9□□□□□ -1.95
R3HDM1-216ENST00000483065 SEC11AP67812 179 aa2.9□□□□□ -1.95
R3HDM1-216ENST00000483065 ZNF818PQ6ZRF7 136 aa2.9□□□□□ -1.95
R3HDM1-216ENST00000483065 TSLPQ969D9 159 aa2.9□□□□□ -1.95
R3HDM1-216ENST00000483065 S100A16Q96FQ6 103 aaKnown RBP2.9□□□□□ -1.95
R3HDM1-216ENST00000483065 UQCR10Q9UDW1 63 aa2.9□□□□□ -1.95
R3HDM1-216ENST00000483065 TP53BP1Q12888 1972 aaPredicted RBP2.9□□□□□ -1.95
R3HDM1-216ENST00000483065 PLXNA3P51805 1871 aa2.9□□□□□ -1.95
R3HDM1-216ENST00000483065 PXDNQ92626 1479 aa2.9□□□□□ -1.95
R3HDM1-216ENST00000483065 MYH13Q9UKX3 1938 aa2.89□□□□□ -1.95
R3HDM1-216ENST00000483065 SCN9AQ15858 1988 aa2.89□□□□□ -1.95
R3HDM1-216ENST00000483065 PLXNB1O43157 2135 aa2.89□□□□□ -1.95
R3HDM1-216ENST00000483065 TRBV7-1A0A0A6YYK4 115 aa2.89□□□□□ -1.95
R3HDM1-216ENST00000483065 A0A0J9YY99 117 aa2.89□□□□□ -1.95
R3HDM1-216ENST00000483065 LRCOL1A6NCL2 159 aa2.89□□□□□ -1.95
R3HDM1-216ENST00000483065 CRYM-AS1A6NIL9 109 aa2.89□□□□□ -1.95
R3HDM1-216ENST00000483065 CCL16O15467 120 aa2.89□□□□□ -1.95
R3HDM1-216ENST00000483065 SIX6O95475 246 aa2.89□□□□□ -1.95
R3HDM1-216ENST00000483065 TRAPPC2P0DI81 140 aa2.89□□□□□ -1.95
R3HDM1-216ENST00000483065 TRAPPC2BP0DI82 140 aa2.89□□□□□ -1.95
R3HDM1-216ENST00000483065 CCDC88AQ3V6T2 1871 aa2.89□□□□□ -1.95
R3HDM1-216ENST00000483065 LYPD5Q6UWN5 251 aa2.89□□□□□ -1.95
R3HDM1-216ENST00000483065 PATE1Q8WXA2 126 aa2.89□□□□□ -1.95
R3HDM1-216ENST00000483065 CDC42SE1Q9NRR8 79 aa2.89□□□□□ -1.95
R3HDM1-216ENST00000483065 ZNF318Q5VUA4 2279 aa2.89□□□□□ -1.95
R3HDM1-216ENST00000483065 PHIPQ8WWQ0 1821 aa2.89□□□□□ -1.95
R3HDM1-216ENST00000483065 PRDM15P57071 1507 aaPredicted RBP2.88□□□□□ -1.95
R3HDM1-216ENST00000483065 COL24A1Q17RW2 1714 aa2.88□□□□□ -1.95
R3HDM1-216ENST00000483065 IGKV1D-17A0A075B6S4 117 aa2.88□□□□□ -1.95
R3HDM1-216ENST00000483065 CXorf51AA0A1B0GTR3 108 aa2.88□□□□□ -1.95
R3HDM1-216ENST00000483065 FAUP35544 74 aaKnown RBP2.88□□□□□ -1.95
R3HDM1-216ENST00000483065 ADIRFQ15847 76 aa2.88□□□□□ -1.95
R3HDM1-216ENST00000483065 SERP2Q8N6R1 65 aa2.88□□□□□ -1.95
R3HDM1-216ENST00000483065 TVP23CQ96ET8 276 aa2.88□□□□□ -1.95
R3HDM1-216ENST00000483065 MARF1Q9Y4F3 1742 aaKnown RBP2.88□□□□□ -1.95
R3HDM1-216ENST00000483065 IGLV3-32A0A0A0MS00 114 aa2.87□□□□□ -1.95
R3HDM1-216ENST00000483065 hADV29S1A0JD25 119 aa2.87□□□□□ -1.95
R3HDM1-216ENST00000483065 HCG22E2RYF7 251 aa2.87□□□□□ -1.95
R3HDM1-216ENST00000483065 SMIM11AP58511 58 aa2.87□□□□□ -1.95
R3HDM1-216ENST00000483065 MOBPQ13875 183 aa2.87□□□□□ -1.95
R3HDM1-216ENST00000483065 REG4Q9BYZ8 158 aa2.87□□□□□ -1.95
R3HDM1-216ENST00000483065 CACFD1Q9UGQ2 172 aa2.87□□□□□ -1.95
R3HDM1-216ENST00000483065 MYH1P12882 1939 aa2.87□□□□□ -1.95
R3HDM1-216ENST00000483065 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.87□□□□□ -1.95
R3HDM1-216ENST00000483065 CC2D2AQ9P2K1 1620 aa2.86□□□□□ -1.95
R3HDM1-216ENST00000483065 MGAMO43451 1857 aa2.86□□□□□ -1.95
R3HDM1-216ENST00000483065 TRBV6-8A0A0A6YYG3 113 aa2.86□□□□□ -1.95
R3HDM1-216ENST00000483065 A0A0G2JQZ4 141 aa2.86□□□□□ -1.95
R3HDM1-216ENST00000483065 KRTAP9-6A8MVA2 160 aa2.86□□□□□ -1.95
R3HDM1-216ENST00000483065 RNASE2P10153 161 aaKnown RBP2.86□□□□□ -1.95
R3HDM1-216ENST00000483065 ZNF720Q7Z2F6 126 aa2.86□□□□□ -1.95
R3HDM1-216ENST00000483065 PPP1R1CQ8WVI7 109 aa2.86□□□□□ -1.95
R3HDM1-216ENST00000483065 MRPL36Q9P0J6 103 aaKnown RBP2.86□□□□□ -1.95
R3HDM1-216ENST00000483065 KLK9Q9UKQ9 250 aa2.86□□□□□ -1.95
R3HDM1-216ENST00000483065 DISP1Q96F81 1524 aa2.86□□□□□ -1.95
R3HDM1-216ENST00000483065 ALPK3Q96L96 1907 aa2.85□□□□□ -1.95
R3HDM1-216ENST00000483065 AKAP11Q9UKA4 1901 aa2.85□□□□□ -1.95
R3HDM1-216ENST00000483065 TRAV12-3A0A0B4J271 114 aa2.85□□□□□ -1.95
R3HDM1-216ENST00000483065 TRBV6-4A0A1B0GX49 114 aa2.85□□□□□ -1.95
R3HDM1-216ENST00000483065 H3BRN7 92 aa2.85□□□□□ -1.95
R3HDM1-216ENST00000483065 NUPR1O60356 82 aa2.85□□□□□ -1.95
R3HDM1-216ENST00000483065 GAS8-AS1O95177 125 aa2.85□□□□□ -1.95
R3HDM1-216ENST00000483065 IGHV3-30P01768 117 aa2.85□□□□□ -1.95
R3HDM1-216ENST00000483065 P0C880 135 aa2.85□□□□□ -1.95
R3HDM1-216ENST00000483065 IGHV3-30-5P0DP03 117 aa2.85□□□□□ -1.95
R3HDM1-216ENST00000483065 CYP2G1PQ6ZSU1 146 aa2.85□□□□□ -1.95
R3HDM1-216ENST00000483065 LINC00167Q96N53 147 aa2.85□□□□□ -1.95
R3HDM1-216ENST00000483065 HELZP42694 1942 aaKnown RBP2.85□□□□□ -1.95
R3HDM1-216ENST00000483065 TANC2Q9HCD6 1990 aa2.85□□□□□ -1.95
R3HDM1-216ENST00000483065 ERVK-7P63135 1459 aa2.84□□□□□ -1.95
R3HDM1-216ENST00000483065 ADGRB3O60242 1522 aa2.84□□□□□ -1.95
R3HDM1-216ENST00000483065 CPAMD8Q8IZJ3 1885 aa2.84□□□□□ -1.95
R3HDM1-216ENST00000483065 LAMC3Q9Y6N6 1575 aa2.84□□□□□ -1.95
R3HDM1-216ENST00000483065 TRGV4A0A0C4DH28 118 aa2.84□□□□□ -1.95
R3HDM1-216ENST00000483065 TEX49A0A1B0GTD5 131 aa2.84□□□□□ -1.95
R3HDM1-216ENST00000483065 KANTRA0A1W2PQU2 76 aa2.84□□□□□ -1.95
R3HDM1-216ENST00000483065 NUPR2A6NF83 97 aa2.84□□□□□ -1.95
R3HDM1-216ENST00000483065 COX6CP09669 75 aa2.84□□□□□ -1.95
R3HDM1-216ENST00000483065 KRTAP13-2Q52LG2 175 aa2.84□□□□□ -1.95
R3HDM1-216ENST00000483065 SH2D6Q7Z4S9 175 aa2.84□□□□□ -1.95
R3HDM1-216ENST00000483065 FAM213BQ8TBF2 198 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms