RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 UBE2D2P62837 147 aa13.73□□□□□ -0.21
SSR4-209ENST00000482902 PPDPFLQ8WWR9 84 aa13.73□□□□□ -0.21
SSR4-209ENST00000482902 LINC00527Q9UJ94 153 aa13.73□□□□□ -0.21
SSR4-209ENST00000482902 UFC1Q9Y3C8 167 aa13.73□□□□□ -0.21
SSR4-209ENST00000482902 U3KQE9 123 aa13.73□□□□□ -0.21
SSR4-209ENST00000482902 IGHV7-4-1A0A0J9YVY3 117 aa13.72□□□□□ -0.21
SSR4-209ENST00000482902 SFTA2Q6UW10 78 aa13.72□□□□□ -0.21
SSR4-209ENST00000482902 IGHV3OR16-10A0A075B7F0 116 aa13.72□□□□□ -0.21
SSR4-209ENST00000482902 Q6ZQT7 251 aa13.72□□□□□ -0.21
SSR4-209ENST00000482902 C9orf47Q6ZRZ4 202 aa13.72□□□□□ -0.21
SSR4-209ENST00000482902 PRADC1Q9BSG0 188 aa13.72□□□□□ -0.21
SSR4-209ENST00000482902 HIF1ANQ9NWT6 349 aa13.72□□□□□ -0.21
SSR4-209ENST00000482902 TRAV41A0A0B4J266 112 aa13.71□□□□□ -0.21
SSR4-209ENST00000482902 LOC107984156A0A0G2JMH3 177 aa13.71□□□□□ -0.21
SSR4-209ENST00000482902 A6NJY4 79 aa13.71□□□□□ -0.21
SSR4-209ENST00000482902 TEN1Q86WV5 123 aa13.71□□□□□ -0.21
SSR4-209ENST00000482902 ARL17AQ8IVW1 177 aa13.71□□□□□ -0.21
SSR4-209ENST00000482902 NEXN-AS1Q8NBZ9 246 aa13.71□□□□□ -0.21
SSR4-209ENST00000482902 SMIM2Q9BVW6 85 aa13.71□□□□□ -0.21
SSR4-209ENST00000482902 C16orf92Q96LL3 132 aa13.71□□□□□ -0.22
SSR4-209ENST00000482902 MOB4Q9Y3A3 225 aa13.71□□□□□ -0.22
SSR4-209ENST00000482902 PLEKHB2Q96CS7 222 aa13.7□□□□□ -0.22
SSR4-209ENST00000482902 CD7P09564 240 aa13.7□□□□□ -0.22
SSR4-209ENST00000482902 LY6DQ14210 128 aa13.7□□□□□ -0.22
SSR4-209ENST00000482902 SCGB3A1Q96QR1 104 aa13.7□□□□□ -0.22
SSR4-209ENST00000482902 KLK15Q9H2R5 256 aa13.7□□□□□ -0.22
SSR4-209ENST00000482902 ZNF815PA8K554 130 aa13.69□□□□□ -0.22
SSR4-209ENST00000482902 COX6B1P14854 86 aa13.69□□□□□ -0.22
SSR4-209ENST00000482902 TOMM6Q96B49 74 aa13.69□□□□□ -0.22
SSR4-209ENST00000482902 PRSS29PA6NIE9 313 aa13.69□□□□□ -0.22
SSR4-209ENST00000482902 FAM223BA6NKX1 122 aa13.68□□□□□ -0.22
SSR4-209ENST00000482902 SPANXN1Q5VSR9 72 aa13.68□□□□□ -0.22
SSR4-209ENST00000482902 FAM223AQ8IWN6 122 aa13.68□□□□□ -0.22
SSR4-209ENST00000482902 IGHV4-4A0A075B6R2 117 aa13.68□□□□□ -0.22
SSR4-209ENST00000482902 ARL3P36405 182 aa13.68□□□□□ -0.22
SSR4-209ENST00000482902 C19orf54Q5BKX5 351 aa13.68□□□□□ -0.22
SSR4-209ENST00000482902 SBSPONQ8IVN8 264 aa13.68□□□□□ -0.22
SSR4-209ENST00000482902 C20orf173Q96LM9 149 aa13.68□□□□□ -0.22
SSR4-209ENST00000482902 C19orf84I3L1E1 186 aa13.67□□□□□ -0.22
SSR4-209ENST00000482902 PRR9Q5T870 116 aa13.67□□□□□ -0.22
SSR4-209ENST00000482902 RASL10AQ92737 203 aa13.67□□□□□ -0.22
SSR4-209ENST00000482902 HIVEP3Q5T1R4 2406 aa13.67□□□□□ -0.22
SSR4-209ENST00000482902 TCL1BO95988 128 aa13.66□□□□□ -0.22
SSR4-209ENST00000482902 SLC25A16P16260 332 aa13.66□□□□□ -0.22
SSR4-209ENST00000482902 ORMDL2Q53FV1 153 aa13.66□□□□□ -0.22
SSR4-209ENST00000482902 C9orf139Q6ZV77 190 aa13.66□□□□□ -0.22
SSR4-209ENST00000482902 ITLN2Q8WWU7 325 aaPredicted RBP13.66□□□□□ -0.22
SSR4-209ENST00000482902 AKAP6Q13023 2319 aa13.66□□□□□ -0.22
SSR4-209ENST00000482902 H3BVH4 76 aa13.66□□□□□ -0.22
SSR4-209ENST00000482902 SCGB1D4Q6XE38 83 aa13.66□□□□□ -0.22
SSR4-209ENST00000482902 BRD3OSQ6XYD6 125 aa13.66□□□□□ -0.22
SSR4-209ENST00000482902 BAALCQ8WXS3 180 aa13.66□□□□□ -0.22
SSR4-209ENST00000482902 J3KRW8 73 aa13.65□□□□□ -0.22
SSR4-209ENST00000482902 IGF1P05019 195 aa13.65□□□□□ -0.22
SSR4-209ENST00000482902 SRSF9Q13242 221 aaKnown RBP eCLIP13.65□□□□□ -0.22
SSR4-209ENST00000482902 LYRM7Q5U5X0 104 aa13.65□□□□□ -0.22
SSR4-209ENST00000482902 UNQ9165/PRO28630Q6UXU0 137 aa13.65□□□□□ -0.22
SSR4-209ENST00000482902 VCX2Q9H322 139 aa13.65□□□□□ -0.22
SSR4-209ENST00000482902 TRBV12-3P01733 135 aa13.65□□□□□ -0.22
SSR4-209ENST00000482902 IGHV4-39P01824 125 aa13.65□□□□□ -0.22
SSR4-209ENST00000482902 NDUFA11Q86Y39 141 aa13.65□□□□□ -0.22
SSR4-209ENST00000482902 ANAPC13Q9BS18 74 aa13.65□□□□□ -0.22
SSR4-209ENST00000482902 IGHV1-69DA0A0B4J2H0 117 aa13.64□□□□□ -0.23
SSR4-209ENST00000482902 IGHV1-69P01742 117 aa13.64□□□□□ -0.23
SSR4-209ENST00000482902 ZNF688P0C7X2 276 aa13.64□□□□□ -0.23
SSR4-209ENST00000482902 KIR2DL4Q99706 377 aa13.64□□□□□ -0.23
SSR4-209ENST00000482902 CRIP2P52943 208 aaPredicted RBP13.64□□□□□ -0.23
SSR4-209ENST00000482902 SS18L2Q9UHA2 77 aa13.64□□□□□ -0.23
SSR4-209ENST00000482902 SUMO2P61956 95 aaKnown RBP13.63□□□□□ -0.23
SSR4-209ENST00000482902 LENEPQ9Y5L5 61 aa13.63□□□□□ -0.23
SSR4-209ENST00000482902 A8MWV9 139 aa13.63□□□□□ -0.23
SSR4-209ENST00000482902 GPHB5Q86YW7 130 aa13.63□□□□□ -0.23
SSR4-209ENST00000482902 ANKRD29Q8N6D5 301 aa13.63□□□□□ -0.23
SSR4-209ENST00000482902 KLHL30-AS1Q8NEE0 82 aa13.63□□□□□ -0.23
SSR4-209ENST00000482902 CITED1Q99966 193 aa13.62□□□□□ -0.23
SSR4-209ENST00000482902 TRBV20-1A0A075B6N2 111 aa13.62□□□□□ -0.23
SSR4-209ENST00000482902 C2orf66Q6UXQ4 117 aa13.62□□□□□ -0.23
SSR4-209ENST00000482902 LINC00477Q96M19 166 aa13.62□□□□□ -0.23
SSR4-209ENST00000482902 A0A0J9YY99 117 aa13.61□□□□□ -0.23
SSR4-209ENST00000482902 RNF223E7ERA6 249 aa13.61□□□□□ -0.23
SSR4-209ENST00000482902 NDUFA4O00483 81 aa13.61□□□□□ -0.23
SSR4-209ENST00000482902 DEFB1P60022 68 aa13.61□□□□□ -0.23
SSR4-209ENST00000482902 ZFAND6Q6FIF0 208 aa13.61□□□□□ -0.23
SSR4-209ENST00000482902 ZFAND2AQ8N6M9 145 aa13.61□□□□□ -0.23
SSR4-209ENST00000482902 OR10J6PQ8NGY7 276 aa13.61□□□□□ -0.23
SSR4-209ENST00000482902 LY6EQ16553 131 aa13.61□□□□□ -0.23
SSR4-209ENST00000482902 RPL39LQ96EH5 51 aaKnown RBP13.61□□□□□ -0.23
SSR4-209ENST00000482902 SPRY2O43597 315 aa13.6□□□□□ -0.23
SSR4-209ENST00000482902 IGHV3-11P01762 117 aa13.6□□□□□ -0.23
SSR4-209ENST00000482902 GAGE5Q13069 117 aa13.6□□□□□ -0.23
SSR4-209ENST00000482902 GAGE6Q13070 117 aa13.6□□□□□ -0.23
SSR4-209ENST00000482902 IGHV4-61A0A0C4DH41 118 aa13.6□□□□□ -0.23
SSR4-209ENST00000482902 M0R381 172 aa13.6□□□□□ -0.23
SSR4-209ENST00000482902 SOCS3O14543 225 aa13.6□□□□□ -0.23
SSR4-209ENST00000482902 OVOL1O14753 267 aa13.6□□□□□ -0.23
SSR4-209ENST00000482902 TGFAP01135 160 aa13.6□□□□□ -0.23
SSR4-209ENST00000482902 NHLRC4P0CG21 123 aaPredicted RBP13.6□□□□□ -0.23
SSR4-209ENST00000482902 CFC1BP0CG36 223 aa13.6□□□□□ -0.23
SSR4-209ENST00000482902 CFC1P0CG37 223 aa13.6□□□□□ -0.23
SSR4-209ENST00000482902 TRAV21A0A0B4J279 112 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms