RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 RPL7L1Q6DKI1 246 aaKnown RBP1.68□□□□□ -2.14
XRN1-211ENST00000477237 NOXRED1Q6NXP6 359 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 LINC00643Q86TS7 51 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 BAGE3Q86Y29 109 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 BAGE2Q86Y30 109 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 ZNF645Q8N7E2 425 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 CLDND2Q8NHS1 167 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 CCL4L1Q8NHW4 92 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 OCR1Q9BZK8 76 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 Q9H3A6 140 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 NXT2Q9NPJ8 142 aaKnown RBP1.68□□□□□ -2.14
XRN1-211ENST00000477237 CMC2Q9NRP2 79 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 CRCT1Q9UGL9 99 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 EPDR1Q9UM22 224 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 OBSL1O75147 1896 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 C4AP0C0L4 1744 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 C4BP0C0L5 1744 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 HMCN1Q96RW7 5635 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 SIP14410 1827 aa1.68□□□□□ -2.14
XRN1-211ENST00000477237 LMO7Q8WWI1 1683 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 DLEC1Q9Y238 1755 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 ATG2BQ96BY7 2078 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 PIKFYVEQ9Y2I7 2098 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 LRRC37A3O60309 1634 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 NHSL1Q5SYE7 1610 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 TNS1Q9HBL0 1735 aaKnown RBP1.67□□□□□ -2.14
XRN1-211ENST00000477237 IGLV3-9A0A075B6K5 115 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 IGKV1D-17A0A075B6S4 117 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 IGHV3OR16-12A0A075B7B8 117 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 IGKV1-12A0A0C4DH73 117 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 C19orf71A6NCJ1 209 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 ZNF736B4DX44 427 aaPredicted RBP1.67□□□□□ -2.14
XRN1-211ENST00000477237 H7BZZ5 65 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 K7EQG2 157 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 IGKV1D-12P01611 117 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 IGKV1-16P04430 117 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 HLA-DPB1P04440 258 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 ACYP1P07311 99 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 SCGB1C2P0DMR2 95 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 IGHV3-43DP0DP04 118 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 GCHFRP30047 84 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 FUSP35637 526 aaKnown RBP eCLIP1.67□□□□□ -2.14
XRN1-211ENST00000477237 UBE2AP49459 152 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 FXYD2P54710 66 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 UBE2D3P61077 147 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 UBE2D2P62837 147 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 BLCAPP62952 87 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 RPL18Q07020 188 aaKnown RBP1.67□□□□□ -2.14
XRN1-211ENST00000477237 ZNF816Q0VGE8 651 aaPredicted RBP1.67□□□□□ -2.14
XRN1-211ENST00000477237 RBMY1FQ15415 496 aaKnown RBP1.67□□□□□ -2.14
XRN1-211ENST00000477237 RHOHQ15669 191 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 Q1T7F1 81 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 NCBP2-AS2Q69YL0 99 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 LYPD5Q6UWN5 251 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 FLVCR1-AS1Q8TAF5 88 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 ITLN1Q8WWA0 313 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 ITLN2Q8WWU7 325 aaPredicted RBP1.67□□□□□ -2.14
XRN1-211ENST00000477237 FAM104AQ969W3 186 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 KRTAP4-1Q9BYQ7 146 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 IL36BQ9NZH7 164 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 ABRACLQ9P1F3 81 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 LINC00474Q9P2X8 69 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 ANKRD36A6QL64 1941 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 NINQ8N4C6 2090 aa1.67□□□□□ -2.14
XRN1-211ENST00000477237 A0A0G2JMZ2 1700 aa1.66□□□□□ -2.14
XRN1-211ENST00000477237 LRRC37A2A6NM11 1700 aa1.66□□□□□ -2.14
XRN1-211ENST00000477237 LRRC37AA6NMS7 1700 aa1.66□□□□□ -2.14
XRN1-211ENST00000477237 LAMA4Q16363 1823 aa1.66□□□□□ -2.14
XRN1-211ENST00000477237 IGHV1OR15-1A0A075B7D0 117 aa1.66□□□□□ -2.14
XRN1-211ENST00000477237 IGHV3OR15-7A0A075B7D8 119 aa1.66□□□□□ -2.14
XRN1-211ENST00000477237 TCRBV4S1A1TA0A5B7 111 aa1.66□□□□□ -2.14
XRN1-211ENST00000477237 BCE1O60756 84 aa1.66□□□□□ -2.14
XRN1-211ENST00000477237 PRM2P04554 102 aa1.66□□□□□ -2.14
XRN1-211ENST00000477237 CD28P10747 220 aa1.66□□□□□ -2.14
XRN1-211ENST00000477237 PCBD1P61457 104 aa1.66□□□□□ -2.14
XRN1-211ENST00000477237 SSBP1Q04837 148 aaKnown RBP1.66□□□□□ -2.14
XRN1-211ENST00000477237 REG3AQ06141 175 aa1.66□□□□□ -2.14
XRN1-211ENST00000477237 C17orf58Q2M2W7 97 aa1.66□□□□□ -2.14
XRN1-211ENST00000477237 CXCL17Q6UXB2 119 aa1.66□□□□□ -2.14
XRN1-211ENST00000477237 ATP11AUNQ6ZP68 121 aa1.66□□□□□ -2.14
XRN1-211ENST00000477237 ZCCHC23Q6ZST2 131 aa1.66□□□□□ -2.14
XRN1-211ENST00000477237 PDPNQ86YL7 162 aa1.66□□□□□ -2.14
XRN1-211ENST00000477237 SLC50A1Q9BRV3 221 aa1.66□□□□□ -2.14
XRN1-211ENST00000477237 FAM103A1Q9BTL3 118 aaKnown RBP1.66□□□□□ -2.14
XRN1-211ENST00000477237 NPCDR1Q9BY65 106 aa1.66□□□□□ -2.14
XRN1-211ENST00000477237 TAS2R4Q9NYW5 299 aa1.66□□□□□ -2.14
XRN1-211ENST00000477237 ARL2-SNX15V9GYD0 113 aa1.66□□□□□ -2.14
XRN1-211ENST00000477237 KIAA1549Q9HCM3 1950 aa1.66□□□□□ -2.14
XRN1-211ENST00000477237 DLG5Q8TDM6 1919 aa1.66□□□□□ -2.14
XRN1-211ENST00000477237 PLXNB3Q9ULL4 1909 aa1.66□□□□□ -2.14
XRN1-211ENST00000477237 IGHV1-45A0A0A0MS14 117 aa1.65□□□□□ -2.15
XRN1-211ENST00000477237 TRBV7-1A0A0A6YYK4 115 aa1.65□□□□□ -2.15
XRN1-211ENST00000477237 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.65□□□□□ -2.15
XRN1-211ENST00000477237 TRAV13-2A0A0B4J235 113 aa1.65□□□□□ -2.15
XRN1-211ENST00000477237 C3orf84H3BNL1 204 aa1.65□□□□□ -2.15
XRN1-211ENST00000477237 NDUFC1O43677 76 aa1.65□□□□□ -2.15
XRN1-211ENST00000477237 SNRNP200O75643 2136 aaKnown RBP1.65□□□□□ -2.15
XRN1-211ENST00000477237 RNASE2P10153 161 aaKnown RBP1.65□□□□□ -2.15
XRN1-211ENST00000477237 IGHV1-2P23083 117 aa1.65□□□□□ -2.15
XRN1-211ENST00000477237 S100A4P26447 101 aaKnown RBP1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms