RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 C11orf94C9JXX5 98 aa6.88□□□□□ -1.31
HDAC3-208ENST00000476739 FAM3BP58499 235 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-208ENST00000476739 RBX1P62877 108 aa6.88□□□□□ -1.31
HDAC3-208ENST00000476739 DMRTA1Q5VZB9 504 aa6.88□□□□□ -1.31
HDAC3-208ENST00000476739 C5orf17Q8NAS9 161 aa6.88□□□□□ -1.31
HDAC3-208ENST00000476739 NUDT10Q8NFP7 164 aa6.88□□□□□ -1.31
HDAC3-208ENST00000476739 TMEM263Q8WUH6 116 aaKnown RBP6.88□□□□□ -1.31
HDAC3-208ENST00000476739 MBD3L1Q8WWY6 194 aa6.88□□□□□ -1.31
HDAC3-208ENST00000476739 LINC00479Q96M42 142 aa6.88□□□□□ -1.31
HDAC3-208ENST00000476739 PYGO2Q9BRQ0 406 aa6.88□□□□□ -1.31
HDAC3-208ENST00000476739 NOP10Q9NPE3 64 aaKnown RBP6.88□□□□□ -1.31
HDAC3-208ENST00000476739 KLK5Q9Y337 293 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-208ENST00000476739 ALMS1Q8TCU4 4167 aa6.87□□□□□ -1.31
HDAC3-208ENST00000476739 TRAV10A0A0B4J240 114 aa6.87□□□□□ -1.31
HDAC3-208ENST00000476739 TRAV34A0A0B4J273 112 aa6.87□□□□□ -1.31
HDAC3-208ENST00000476739 IGLL5B9A064 214 aa6.87□□□□□ -1.31
HDAC3-208ENST00000476739 F6UZH7 168 aa6.87□□□□□ -1.31
HDAC3-208ENST00000476739 EREGO14944 169 aa6.87□□□□□ -1.31
HDAC3-208ENST00000476739 TRGC2P03986 189 aa6.87□□□□□ -1.31
HDAC3-208ENST00000476739 DEFB130BP0DP73 79 aa6.87□□□□□ -1.31
HDAC3-208ENST00000476739 DEFB130AP0DP74 79 aa6.87□□□□□ -1.31
HDAC3-208ENST00000476739 AKR1C3P42330 323 aa6.87□□□□□ -1.31
HDAC3-208ENST00000476739 C11orf72Q8NBR9 251 aa6.87□□□□□ -1.31
HDAC3-208ENST00000476739 SMIM12Q96EX1 92 aa6.87□□□□□ -1.31
HDAC3-208ENST00000476739 C8orf49Q96NF6 230 aa6.87□□□□□ -1.31
HDAC3-208ENST00000476739 APLNQ9ULZ1 77 aa6.87□□□□□ -1.31
HDAC3-208ENST00000476739 IGHV4-4A0A075B6R2 117 aa6.86□□□□□ -1.31
HDAC3-208ENST00000476739 IGHV1OR15-1A0A075B7D0 117 aa6.86□□□□□ -1.31
HDAC3-208ENST00000476739 CBY3A6NI87 242 aa6.86□□□□□ -1.31
HDAC3-208ENST00000476739 LYRM9A8MSI8 78 aa6.86□□□□□ -1.31
HDAC3-208ENST00000476739 NPSP0C0P6 89 aa6.86□□□□□ -1.31
HDAC3-208ENST00000476739 HTN3P15516 51 aa6.86□□□□□ -1.31
HDAC3-208ENST00000476739 ATP5G3P48201 142 aa6.86□□□□□ -1.31
HDAC3-208ENST00000476739 ZNF80P51504 273 aaPredicted RBP6.86□□□□□ -1.31
HDAC3-208ENST00000476739 DAD1P61803 113 aa6.86□□□□□ -1.31
HDAC3-208ENST00000476739 CCL20P78556 96 aa6.86□□□□□ -1.31
HDAC3-208ENST00000476739 TMEM183BQ1AE95 376 aa6.86□□□□□ -1.31
HDAC3-208ENST00000476739 ZNF506Q5JVG8 444 aa6.86□□□□□ -1.31
HDAC3-208ENST00000476739 MUC21Q5SSG8 566 aa6.86□□□□□ -1.31
HDAC3-208ENST00000476739 Q6AWC8 147 aa6.86□□□□□ -1.31
HDAC3-208ENST00000476739 ZNF493Q6ZR52 646 aa6.86□□□□□ -1.31
HDAC3-208ENST00000476739 PRNTQ86SH4 94 aa6.86□□□□□ -1.31
HDAC3-208ENST00000476739 CYB561D1Q8N8Q1 229 aa6.86□□□□□ -1.31
HDAC3-208ENST00000476739 LINC00467Q9BRT7 94 aa6.86□□□□□ -1.31
HDAC3-208ENST00000476739 ATG101Q9BSB4 218 aa6.86□□□□□ -1.31
HDAC3-208ENST00000476739 PSG8Q9UQ74 426 aa6.86□□□□□ -1.31
HDAC3-208ENST00000476739 KLF12Q9Y4X4 402 aa6.86□□□□□ -1.31
HDAC3-208ENST00000476739 TIMM8BQ9Y5J9 83 aaPredicted RBP6.86□□□□□ -1.31
HDAC3-208ENST00000476739 LENEPQ9Y5L5 61 aa6.86□□□□□ -1.31
HDAC3-208ENST00000476739 TEX48A0A1B0GUV7 120 aa6.85□□□□□ -1.31
HDAC3-208ENST00000476739 SERTM2A0A1B0GWG4 89 aa6.85□□□□□ -1.31
HDAC3-208ENST00000476739 PEX7O00628 323 aa6.85□□□□□ -1.31
HDAC3-208ENST00000476739 PAGE4O60829 102 aa6.85□□□□□ -1.31
HDAC3-208ENST00000476739 PTTG1IPP53801 180 aa6.85□□□□□ -1.31
HDAC3-208ENST00000476739 ANXA2RQ3ZCQ2 193 aa6.85□□□□□ -1.31
HDAC3-208ENST00000476739 CST9LP1Q5W188 147 aa6.85□□□□□ -1.31
HDAC3-208ENST00000476739 LINC00612Q8N6U2 182 aa6.85□□□□□ -1.31
HDAC3-208ENST00000476739 TMEM75Q8N9X5 138 aa6.85□□□□□ -1.31
HDAC3-208ENST00000476739 LINC00476Q8WZB0 136 aa6.85□□□□□ -1.31
HDAC3-208ENST00000476739 FRZBQ92765 325 aa6.85□□□□□ -1.31
HDAC3-208ENST00000476739 NAGKQ9UJ70 344 aa6.85□□□□□ -1.31
HDAC3-208ENST00000476739 DNAH1Q9P2D7 4330 aa6.85□□□□□ -1.31
HDAC3-208ENST00000476739 TRAV1-1A0A0B4J248 108 aa6.84□□□□□ -1.31
HDAC3-208ENST00000476739 GAGE12BA1L429 117 aa6.84□□□□□ -1.31
HDAC3-208ENST00000476739 XKRY2A2RUG3 117 aa6.84□□□□□ -1.31
HDAC3-208ENST00000476739 SNURFLB1AK76 121 aa6.84□□□□□ -1.31
HDAC3-208ENST00000476739 GAGE7O76087 117 aa6.84□□□□□ -1.31
HDAC3-208ENST00000476739 LY6G6CO95867 125 aa6.84□□□□□ -1.31
HDAC3-208ENST00000476739 SRP19P09132 144 aaKnown RBP6.84□□□□□ -1.31
HDAC3-208ENST00000476739 CXCL1P09341 107 aa6.84□□□□□ -1.31
HDAC3-208ENST00000476739 GAGE12FP0CL80 117 aa6.84□□□□□ -1.31
HDAC3-208ENST00000476739 GAGE12GP0CL81 117 aa6.84□□□□□ -1.31
HDAC3-208ENST00000476739 GAGE12IP0CL82 117 aa6.84□□□□□ -1.31
HDAC3-208ENST00000476739 UBE2V1Q13404 147 aa6.84□□□□□ -1.31
HDAC3-208ENST00000476739 OR5I1Q13606 314 aa6.84□□□□□ -1.31
HDAC3-208ENST00000476739 CDPF1Q6NVV7 123 aa6.84□□□□□ -1.31
HDAC3-208ENST00000476739 Q6ZTI0 123 aa6.84□□□□□ -1.31
HDAC3-208ENST00000476739 ANAPC16Q96DE5 110 aa6.84□□□□□ -1.31
HDAC3-208ENST00000476739 MDFICQ9P1T7 246 aa6.84□□□□□ -1.31
HDAC3-208ENST00000476739 C11orf21Q9P2W6 132 aa6.84□□□□□ -1.31
HDAC3-208ENST00000476739 ARL2-SNX15V9GYD0 113 aa6.84□□□□□ -1.31
HDAC3-208ENST00000476739 A6NJY4 79 aa6.83□□□□□ -1.32
HDAC3-208ENST00000476739 K7EQM0 130 aa6.83□□□□□ -1.32
HDAC3-208ENST00000476739 GNRH2O43555 120 aa6.83□□□□□ -1.32
HDAC3-208ENST00000476739 SCGB1D1O95968 90 aa6.83□□□□□ -1.32
HDAC3-208ENST00000476739 IFNA1P01562 189 aa6.83□□□□□ -1.32
HDAC3-208ENST00000476739 TCL1AP56279 114 aa6.83□□□□□ -1.32
HDAC3-208ENST00000476739 DAZ2Q13117 558 aaKnown RBP6.83□□□□□ -1.32
HDAC3-208ENST00000476739 LINC01551Q86U37 167 aa6.83□□□□□ -1.32
HDAC3-208ENST00000476739 KMT2AQ03164 3969 aa6.83□□□□□ -1.32
HDAC3-208ENST00000476739 TRGV1A0A0A0MS02 117 aa6.82□□□□□ -1.32
HDAC3-208ENST00000476739 TGIF2-C20orf24A0A0A6YYL0 155 aa6.82□□□□□ -1.32
HDAC3-208ENST00000476739 TRAV21A0A0B4J279 112 aa6.82□□□□□ -1.32
HDAC3-208ENST00000476739 F5H768 121 aa6.82□□□□□ -1.32
HDAC3-208ENST00000476739 K7ERU9 68 aa6.82□□□□□ -1.32
HDAC3-208ENST00000476739 SPINK4O60575 86 aa6.82□□□□□ -1.32
HDAC3-208ENST00000476739 TYMSP04818 313 aa6.82□□□□□ -1.32
HDAC3-208ENST00000476739 RPL19P84098 196 aaKnown RBP6.82□□□□□ -1.32
HDAC3-208ENST00000476739 IBA57Q5T440 356 aaKnown RBP6.82□□□□□ -1.32
HDAC3-208ENST00000476739 FAM159AQ6UWV7 190 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms