RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 KLF12Q9Y4X4 402 aa9.68□□□□□ -0.86
ATG9A-220ENST00000475339 PFN1P07737 140 aaKnown RBP9.67□□□□□ -0.86
ATG9A-220ENST00000475339 LINC00612Q8N6U2 182 aa9.67□□□□□ -0.86
ATG9A-220ENST00000475339 KCNS1Q96KK3 526 aa9.67□□□□□ -0.86
ATG9A-220ENST00000475339 MANBALQ9NQG1 85 aa9.67□□□□□ -0.86
ATG9A-220ENST00000475339 MRPL16Q9NX20 251 aaKnown RBP9.67□□□□□ -0.86
ATG9A-220ENST00000475339 GNG13Q9P2W3 67 aa9.67□□□□□ -0.86
ATG9A-220ENST00000475339 EREGO14944 169 aa9.66□□□□□ -0.86
ATG9A-220ENST00000475339 SPINK4O60575 86 aa9.66□□□□□ -0.86
ATG9A-220ENST00000475339 OR5I1Q13606 314 aa9.66□□□□□ -0.86
ATG9A-220ENST00000475339 TDRG1Q3Y452 100 aa9.66□□□□□ -0.86
ATG9A-220ENST00000475339 Q6ZRN7 208 aaPredicted RBP9.66□□□□□ -0.86
ATG9A-220ENST00000475339 TRAV1-1A0A0B4J248 108 aa9.65□□□□□ -0.86
ATG9A-220ENST00000475339 IFNA1P01562 189 aa9.65□□□□□ -0.86
ATG9A-220ENST00000475339 ZNF80P51504 273 aaPredicted RBP9.65□□□□□ -0.86
ATG9A-220ENST00000475339 NKX2-5P52952 324 aaPredicted RBP9.65□□□□□ -0.86
ATG9A-220ENST00000475339 LINC00315P59091 139 aa9.65□□□□□ -0.86
ATG9A-220ENST00000475339 SPXQ9BT56 116 aa9.65□□□□□ -0.86
ATG9A-220ENST00000475339 ZFP30Q9Y2G7 519 aa9.65□□□□□ -0.86
ATG9A-220ENST00000475339 SCO2A0A1W2PP80 73 aa9.64□□□□□ -0.87
ATG9A-220ENST00000475339 TYMSP04818 313 aa9.64□□□□□ -0.87
ATG9A-220ENST00000475339 IGHV3-16A0A0C4DH30 117 aa9.63□□□□□ -0.87
ATG9A-220ENST00000475339 A0A1W2PPQ1 181 aa9.63□□□□□ -0.87
ATG9A-220ENST00000475339 GNRH2O43555 120 aa9.63□□□□□ -0.87
ATG9A-220ENST00000475339 IGHV3-53P01767 116 aa9.63□□□□□ -0.87
ATG9A-220ENST00000475339 S100A9P06702 114 aaKnown RBP9.63□□□□□ -0.87
ATG9A-220ENST00000475339 CCL20P78556 96 aa9.63□□□□□ -0.87
ATG9A-220ENST00000475339 DEFB104AQ8WTQ1 72 aa9.63□□□□□ -0.87
ATG9A-220ENST00000475339 TRAV26-1A0A087WT03 109 aa9.62□□□□□ -0.87
ATG9A-220ENST00000475339 A0A0J9YY99 117 aa9.62□□□□□ -0.87
ATG9A-220ENST00000475339 TRBV6-1A0A0K0K1D8 114 aa9.62□□□□□ -0.87
ATG9A-220ENST00000475339 FABP5P3A8MUU1 101 aa9.62□□□□□ -0.87
ATG9A-220ENST00000475339 M0R2P5 195 aa9.62□□□□□ -0.87
ATG9A-220ENST00000475339 LTAP01374 205 aa9.62□□□□□ -0.87
ATG9A-220ENST00000475339 ERVFC1-1P60608 527 aa9.62□□□□□ -0.87
ATG9A-220ENST00000475339 FAM162BQ5T6X4 162 aa9.62□□□□□ -0.87
ATG9A-220ENST00000475339 ALKAL2Q6UX46 152 aa9.62□□□□□ -0.87
ATG9A-220ENST00000475339 ZC2HC1AQ96GY0 325 aa9.62□□□□□ -0.87
ATG9A-220ENST00000475339 ORM1P02763 201 aa9.61□□□□□ -0.87
ATG9A-220ENST00000475339 DNAH10OSP0CZ25 163 aa9.61□□□□□ -0.87
ATG9A-220ENST00000475339 HOXA5P20719 270 aa9.61□□□□□ -0.87
ATG9A-220ENST00000475339 GCSHP23434 173 aa9.61□□□□□ -0.87
ATG9A-220ENST00000475339 S100A4P26447 101 aaKnown RBP9.61□□□□□ -0.87
ATG9A-220ENST00000475339 TXNDC17Q9BRA2 123 aa9.61□□□□□ -0.87
ATG9A-220ENST00000475339 FAT3Q8TDW7 4589 aa9.61□□□□□ -0.87
ATG9A-220ENST00000475339 LRP2P98164 4655 aa9.61□□□□□ -0.87
ATG9A-220ENST00000475339 SH2D1AO60880 128 aa9.6□□□□□ -0.87
ATG9A-220ENST00000475339 PLA2G1BP04054 148 aaKnown RBP9.6□□□□□ -0.87
ATG9A-220ENST00000475339 BCL2P10415 239 aa9.6□□□□□ -0.87
ATG9A-220ENST00000475339 ASIPP42127 132 aa9.6□□□□□ -0.87
ATG9A-220ENST00000475339 BLOC1S1P78537 153 aa9.6□□□□□ -0.87
ATG9A-220ENST00000475339 MEF2BQ02080 365 aaPredicted RBP9.6□□□□□ -0.87
ATG9A-220ENST00000475339 BAGE2Q86Y30 109 aa9.6□□□□□ -0.87
ATG9A-220ENST00000475339 NHLRC2Q8NBF2 726 aa9.6□□□□□ -0.87
ATG9A-220ENST00000475339 RASL10AQ92737 203 aa9.6□□□□□ -0.87
ATG9A-220ENST00000475339 C11orf21Q9P2W6 132 aa9.6□□□□□ -0.87
ATG9A-220ENST00000475339 TRGV4A0A0C4DH28 118 aa9.59□□□□□ -0.87
ATG9A-220ENST00000475339 B4DEV8 164 aa9.59□□□□□ -0.87
ATG9A-220ENST00000475339 M0R036 132 aa9.59□□□□□ -0.87
ATG9A-220ENST00000475339 PDE6DO43924 150 aa9.59□□□□□ -0.87
ATG9A-220ENST00000475339 TAGLN2P37802 199 aaKnown RBP9.59□□□□□ -0.87
ATG9A-220ENST00000475339 COX8CQ7Z4L0 72 aa9.59□□□□□ -0.87
ATG9A-220ENST00000475339 BOLA1Q9Y3E2 137 aa9.59□□□□□ -0.87
ATG9A-220ENST00000475339 A0A087WTM6 91 aa9.58□□□□□ -0.88
ATG9A-220ENST00000475339 TRAV4A0A0B4J268 109 aa9.58□□□□□ -0.88
ATG9A-220ENST00000475339 C9JCJ5 164 aa9.58□□□□□ -0.88
ATG9A-220ENST00000475339 RPL35P42766 123 aaKnown RBP9.58□□□□□ -0.88
ATG9A-220ENST00000475339 SLAQ13239 276 aa9.58□□□□□ -0.88
ATG9A-220ENST00000475339 ZNF876PQ49A33 203 aa9.58□□□□□ -0.88
ATG9A-220ENST00000475339 OR4C5Q8NGB2 326 aa9.58□□□□□ -0.88
ATG9A-220ENST00000475339 C11orf52Q96A22 123 aa9.58□□□□□ -0.88
ATG9A-220ENST00000475339 UPK3BQ9BT76 320 aa9.58□□□□□ -0.88
ATG9A-220ENST00000475339 VAX2Q9UIW0 290 aa9.58□□□□□ -0.88
ATG9A-220ENST00000475339 TMSB15BA0A087X1C1 80 aa9.57□□□□□ -0.88
ATG9A-220ENST00000475339 IGKV3D-20A0A0C4DH25 116 aa9.57□□□□□ -0.88
ATG9A-220ENST00000475339 H3BNG1 76 aa9.57□□□□□ -0.88
ATG9A-220ENST00000475339 PAX4O43316 350 aa9.57□□□□□ -0.88
ATG9A-220ENST00000475339 SFTA3P0C7M3 94 aa9.57□□□□□ -0.88
ATG9A-220ENST00000475339 ZNF674Q2M3X9 581 aa9.57□□□□□ -0.88
ATG9A-220ENST00000475339 PRR27Q6MZM9 219 aa9.57□□□□□ -0.88
ATG9A-220ENST00000475339 C9orf85Q96MD7 179 aa9.57□□□□□ -0.88
ATG9A-220ENST00000475339 PRO0255Q9UI72 69 aa9.57□□□□□ -0.88
ATG9A-220ENST00000475339 TNFRSF18Q9Y5U5 241 aa9.57□□□□□ -0.88
ATG9A-220ENST00000475339 KRBOX1C9JBD0 128 aa9.56□□□□□ -0.88
ATG9A-220ENST00000475339 H3BVH4 76 aa9.56□□□□□ -0.88
ATG9A-220ENST00000475339 OXTP01178 125 aa9.56□□□□□ -0.88
ATG9A-220ENST00000475339 CRIP1P50238 77 aa9.56□□□□□ -0.88
ATG9A-220ENST00000475339 ESRGQ1W209 222 aa9.56□□□□□ -0.88
ATG9A-220ENST00000475339 CENPWQ5EE01 88 aa9.56□□□□□ -0.88
ATG9A-220ENST00000475339 PCNPQ8WW12 178 aaKnown RBP9.56□□□□□ -0.88
ATG9A-220ENST00000475339 ZNF479Q96JC4 524 aa9.56□□□□□ -0.88
ATG9A-220ENST00000475339 TMEM70Q9BUB7 260 aa9.56□□□□□ -0.88
ATG9A-220ENST00000475339 MED9Q9NWA0 146 aa9.56□□□□□ -0.88
ATG9A-220ENST00000475339 HHLA3Q9XRX5 114 aa9.56□□□□□ -0.88
ATG9A-220ENST00000475339 GRIFINA4D1Z8 144 aa9.55□□□□□ -0.88
ATG9A-220ENST00000475339 MGST1P10620 155 aaKnown RBP9.55□□□□□ -0.88
ATG9A-220ENST00000475339 RNASE3P12724 160 aaKnown RBP9.55□□□□□ -0.88
ATG9A-220ENST00000475339 GNG4P50150 75 aa9.55□□□□□ -0.88
ATG9A-220ENST00000475339 LINC01559Q495D7 138 aa9.55□□□□□ -0.88
ATG9A-220ENST00000475339 VSIG2Q96IQ7 327 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms