RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 DAD1P61803 113 aa4.49□□□□□ -1.69
ECHDC1-215ENST00000475319 PVRIGQ6DKI7 326 aa4.49□□□□□ -1.69
ECHDC1-215ENST00000475319 WDR86Q86TI4 376 aa4.49□□□□□ -1.69
ECHDC1-215ENST00000475319 TMEM75Q8N9X5 138 aa4.49□□□□□ -1.69
ECHDC1-215ENST00000475319 SMCR5Q8TEV8 140 aa4.49□□□□□ -1.69
ECHDC1-215ENST00000475319 ZNF714Q96N38 554 aa4.49□□□□□ -1.69
ECHDC1-215ENST00000475319 DEFB127Q9H1M4 99 aa4.49□□□□□ -1.69
ECHDC1-215ENST00000475319 NCOR2Q9Y618 2525 aa4.49□□□□□ -1.69
ECHDC1-215ENST00000475319 PTPRDP23468 1912 aa4.49□□□□□ -1.69
ECHDC1-215ENST00000475319 MDC1Q14676 2089 aaKnown RBP4.48□□□□□ -1.69
ECHDC1-215ENST00000475319 GTF3C1Q12789 2109 aa4.48□□□□□ -1.69
ECHDC1-215ENST00000475319 ZNF292O60281 2723 aa4.48□□□□□ -1.69
ECHDC1-215ENST00000475319 TRBV27A0A0K0K1C4 114 aa4.48□□□□□ -1.69
ECHDC1-215ENST00000475319 D6R8Y8 96 aa4.48□□□□□ -1.69
ECHDC1-215ENST00000475319 SMKR1H3BMG3 65 aa4.48□□□□□ -1.69
ECHDC1-215ENST00000475319 H7BZZ5 65 aa4.48□□□□□ -1.69
ECHDC1-215ENST00000475319 SPRY3O43610 288 aa4.48□□□□□ -1.69
ECHDC1-215ENST00000475319 IGHV3-30P01768 117 aa4.48□□□□□ -1.69
ECHDC1-215ENST00000475319 IGHV3-30-5P0DP03 117 aa4.48□□□□□ -1.69
ECHDC1-215ENST00000475319 CD24P25063 80 aa4.48□□□□□ -1.69
ECHDC1-215ENST00000475319 XCL1P47992 114 aa4.48□□□□□ -1.69
ECHDC1-215ENST00000475319 SPINT3P49223 89 aa4.48□□□□□ -1.69
ECHDC1-215ENST00000475319 BRWD1-AS2P59051 145 aa4.48□□□□□ -1.69
ECHDC1-215ENST00000475319 MRPS21P82921 87 aaKnown RBP4.48□□□□□ -1.69
ECHDC1-215ENST00000475319 KLKP1Q107X0 134 aa4.48□□□□□ -1.69
ECHDC1-215ENST00000475319 C10orf25Q5T742 122 aa4.48□□□□□ -1.69
ECHDC1-215ENST00000475319 ATP5EP2Q5VTU8 51 aa4.48□□□□□ -1.69
ECHDC1-215ENST00000475319 GFRALQ6UXV0 394 aa4.48□□□□□ -1.69
ECHDC1-215ENST00000475319 LINC00596Q86U02 117 aa4.48□□□□□ -1.69
ECHDC1-215ENST00000475319 TMEM263Q8WUH6 116 aaKnown RBP4.48□□□□□ -1.69
ECHDC1-215ENST00000475319 RNASE6Q93091 150 aaKnown RBP4.48□□□□□ -1.69
ECHDC1-215ENST00000475319 MRPL35Q9NZE8 188 aaKnown RBP4.48□□□□□ -1.69
ECHDC1-215ENST00000475319 XCL2Q9UBD3 114 aa4.48□□□□□ -1.69
ECHDC1-215ENST00000475319 SPTBN2O15020 2390 aa4.48□□□□□ -1.69
ECHDC1-215ENST00000475319 TRBV6-1A0A0K0K1D8 114 aa4.47□□□□□ -1.69
ECHDC1-215ENST00000475319 IBA57-AS1B1ANH7 110 aa4.47□□□□□ -1.69
ECHDC1-215ENST00000475319 K7EMT4 169 aa4.47□□□□□ -1.69
ECHDC1-215ENST00000475319 CCL24O00175 119 aa4.47□□□□□ -1.69
ECHDC1-215ENST00000475319 LST1O00453 97 aa4.47□□□□□ -1.69
ECHDC1-215ENST00000475319 IGKV1D-16P01601 117 aa4.47□□□□□ -1.69
ECHDC1-215ENST00000475319 RBM3P98179 157 aaKnown RBP4.47□□□□□ -1.69
ECHDC1-215ENST00000475319 SS18Q15532 418 aa4.47□□□□□ -1.69
ECHDC1-215ENST00000475319 Q1RN00 199 aa4.47□□□□□ -1.69
ECHDC1-215ENST00000475319 NSUN5P1Q3KNT7 163 aa4.47□□□□□ -1.69
ECHDC1-215ENST00000475319 MIR17HGQ75NE6 70 aa4.47□□□□□ -1.69
ECHDC1-215ENST00000475319 ZNF329Q86UD4 541 aa4.47□□□□□ -1.69
ECHDC1-215ENST00000475319 MKXQ8IYA7 352 aa4.47□□□□□ -1.69
ECHDC1-215ENST00000475319 SLC25A29Q8N8R3 303 aa4.47□□□□□ -1.69
ECHDC1-215ENST00000475319 DCANP1Q8TF63 244 aa4.47□□□□□ -1.69
ECHDC1-215ENST00000475319 TIMM21Q9BVV7 248 aa4.47□□□□□ -1.69
ECHDC1-215ENST00000475319 CNOT1A5YKK6 2376 aaKnown RBP4.47□□□□□ -1.69
ECHDC1-215ENST00000475319 CACNA1GO43497 2377 aa4.47□□□□□ -1.69
ECHDC1-215ENST00000475319 GPR179Q6PRD1 2367 aa4.47□□□□□ -1.69
ECHDC1-215ENST00000475319 ARHGAP21Q5T5U3 1957 aa4.47□□□□□ -1.69
ECHDC1-215ENST00000475319 EPG5Q9HCE0 2579 aa4.47□□□□□ -1.69
ECHDC1-215ENST00000475319 TRIOO75962 3097 aa4.47□□□□□ -1.69
ECHDC1-215ENST00000475319 A0A0J9YY99 117 aa4.46□□□□□ -1.69
ECHDC1-215ENST00000475319 CXorf51AA0A1B0GTR3 108 aa4.46□□□□□ -1.69
ECHDC1-215ENST00000475319 LOC389332A0A1B0GUA5 103 aa4.46□□□□□ -1.69
ECHDC1-215ENST00000475319 UBE2L6O14933 153 aa4.46□□□□□ -1.69
ECHDC1-215ENST00000475319 IGHV4-39P01824 125 aa4.46□□□□□ -1.69
ECHDC1-215ENST00000475319 COX6B1P14854 86 aa4.46□□□□□ -1.69
ECHDC1-215ENST00000475319 CKS2P33552 79 aa4.46□□□□□ -1.69
ECHDC1-215ENST00000475319 RHOHQ15669 191 aa4.46□□□□□ -1.69
ECHDC1-215ENST00000475319 ECSCRQ19T08 205 aa4.46□□□□□ -1.69
ECHDC1-215ENST00000475319 GUSBP11Q6P575 273 aa4.46□□□□□ -1.69
ECHDC1-215ENST00000475319 Q6ZS52 159 aa4.46□□□□□ -1.69
ECHDC1-215ENST00000475319 PRR26Q8N8Z3 221 aa4.46□□□□□ -1.69
ECHDC1-215ENST00000475319 Q9H3A6 140 aa4.46□□□□□ -1.69
ECHDC1-215ENST00000475319 C11orf68Q9H3H3 251 aaKnown RBP4.46□□□□□ -1.69
ECHDC1-215ENST00000475319 PROK2Q9HC23 129 aa4.46□□□□□ -1.69
ECHDC1-215ENST00000475319 BPTFQ12830 3046 aa4.46□□□□□ -1.7
ECHDC1-215ENST00000475319 NCOA6Q14686 2063 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-215ENST00000475319 DOCK11Q5JSL3 2073 aa4.46□□□□□ -1.7
ECHDC1-215ENST00000475319 PTPRBP23467 1997 aa4.46□□□□□ -1.7
ECHDC1-215ENST00000475319 TRAV13-2A0A0B4J235 113 aa4.46□□□□□ -1.7
ECHDC1-215ENST00000475319 INAFM1C9JVW0 142 aa4.46□□□□□ -1.7
ECHDC1-215ENST00000475319 C8orf87E5RJ46 101 aa4.46□□□□□ -1.7
ECHDC1-215ENST00000475319 NXPH4O95158 308 aa4.46□□□□□ -1.7
ECHDC1-215ENST00000475319 IGHV4-30-4P0DP06 118 aa4.46□□□□□ -1.7
ECHDC1-215ENST00000475319 PLGLAQ15195 96 aa4.46□□□□□ -1.7
ECHDC1-215ENST00000475319 S100A7L2Q5SY68 101 aa4.46□□□□□ -1.7
ECHDC1-215ENST00000475319 FAM222AQ5U5X8 452 aa4.46□□□□□ -1.7
ECHDC1-215ENST00000475319 FAM223AQ8IWN6 122 aa4.46□□□□□ -1.7
ECHDC1-215ENST00000475319 UBALD1Q8TB05 177 aa4.46□□□□□ -1.7
ECHDC1-215ENST00000475319 TSACCQ96A04 125 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-215ENST00000475319 ZNF71Q9NQZ8 489 aaPredicted RBP4.46□□□□□ -1.7
ECHDC1-215ENST00000475319 SPAG17Q6Q759 2223 aa4.46□□□□□ -1.7
ECHDC1-215ENST00000475319 C5orf42Q9H799 3197 aa4.46□□□□□ -1.7
ECHDC1-215ENST00000475319 FAM208BQ5VWN6 2430 aa4.45□□□□□ -1.7
ECHDC1-215ENST00000475319 TRGV8A0A0C4DH27 118 aa4.45□□□□□ -1.7
ECHDC1-215ENST00000475319 TMEM223A0PJW6 202 aa4.45□□□□□ -1.7
ECHDC1-215ENST00000475319 FAM223BA6NKX1 122 aa4.45□□□□□ -1.7
ECHDC1-215ENST00000475319 ZNHIT1O43257 154 aa4.45□□□□□ -1.7
ECHDC1-215ENST00000475319 LYPD5Q6UWN5 251 aa4.45□□□□□ -1.7
ECHDC1-215ENST00000475319 FOXL2NBQ6ZUU3 175 aa4.45□□□□□ -1.7
ECHDC1-215ENST00000475319 Q8N2B8 174 aa4.45□□□□□ -1.7
ECHDC1-215ENST00000475319 MPLKIPQ8TAP9 179 aa4.45□□□□□ -1.7
ECHDC1-215ENST00000475319 ITLN1Q8WWA0 313 aa4.45□□□□□ -1.7
ECHDC1-215ENST00000475319 SPTSSAQ969W0 71 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms