RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 SPINK4O60575 86 aa10.55□□□□□ -0.72
VARS-223ENST00000474643 TDRG1Q3Y452 100 aa10.55□□□□□ -0.72
VARS-223ENST00000474643 LINC00612Q8N6U2 182 aa10.55□□□□□ -0.72
VARS-223ENST00000474643 SPXQ9BT56 116 aa10.55□□□□□ -0.72
VARS-223ENST00000474643 DNAH17Q9UFH2 4485 aa10.54□□□□□ -0.72
VARS-223ENST00000474643 FABP5P3A8MUU1 101 aa10.54□□□□□ -0.72
VARS-223ENST00000474643 TYMSP04818 313 aa10.54□□□□□ -0.72
VARS-223ENST00000474643 GNG4P50150 75 aa10.54□□□□□ -0.72
VARS-223ENST00000474643 BAGE2Q86Y30 109 aa10.54□□□□□ -0.72
VARS-223ENST00000474643 PARLQ9H300 379 aa10.54□□□□□ -0.72
VARS-223ENST00000474643 MUC4Q99102 2169 aa10.53□□□□□ -0.72
VARS-223ENST00000474643 C16orf90A8MZG2 172 aa10.53□□□□□ -0.72
VARS-223ENST00000474643 IGHV3-53P01767 116 aa10.53□□□□□ -0.72
VARS-223ENST00000474643 HOXA5P20719 270 aa10.53□□□□□ -0.72
VARS-223ENST00000474643 ZNF575Q86XF7 245 aa10.53□□□□□ -0.72
VARS-223ENST00000474643 Q9H8V8 135 aa10.53□□□□□ -0.72
VARS-223ENST00000474643 HERC2O95714 4834 aa10.53□□□□□ -0.72
VARS-223ENST00000474643 IGHV3-16A0A0C4DH30 117 aa10.52□□□□□ -0.73
VARS-223ENST00000474643 ORM1P02763 201 aa10.52□□□□□ -0.73
VARS-223ENST00000474643 S100A4P26447 101 aaKnown RBP10.52□□□□□ -0.73
VARS-223ENST00000474643 SRSF3P84103 164 aaKnown RBP10.52□□□□□ -0.73
VARS-223ENST00000474643 NDUFA5Q16718 116 aa10.52□□□□□ -0.73
VARS-223ENST00000474643 ZC2HC1AQ96GY0 325 aa10.52□□□□□ -0.73
VARS-223ENST00000474643 DERL1Q9BUN8 251 aa10.52□□□□□ -0.73
VARS-223ENST00000474643 C9JQL5 133 aa10.51□□□□□ -0.73
VARS-223ENST00000474643 M0R2P5 195 aa10.51□□□□□ -0.73
VARS-223ENST00000474643 TNP2Q05952 138 aa10.51□□□□□ -0.73
VARS-223ENST00000474643 CENPWQ5EE01 88 aa10.51□□□□□ -0.73
VARS-223ENST00000474643 FAM162BQ5T6X4 162 aa10.51□□□□□ -0.73
VARS-223ENST00000474643 COMMD7Q86VX2 200 aa10.51□□□□□ -0.73
VARS-223ENST00000474643 NHLRC2Q8NBF2 726 aa10.51□□□□□ -0.73
VARS-223ENST00000474643 SMIM7Q9BQ49 75 aa10.51□□□□□ -0.73
VARS-223ENST00000474643 KRTAP17-1Q9BYP8 105 aa10.51□□□□□ -0.73
VARS-223ENST00000474643 C11orf21Q9P2W6 132 aa10.51□□□□□ -0.73
VARS-223ENST00000474643 PKD1P98161 4303 aa10.5□□□□□ -0.73
VARS-223ENST00000474643 TRBV20OR9-2A0A075B6H5 130 aa10.5□□□□□ -0.73
VARS-223ENST00000474643 ZNF727A8MUV8 499 aa10.5□□□□□ -0.73
VARS-223ENST00000474643 B4DEV8 164 aa10.5□□□□□ -0.73
VARS-223ENST00000474643 H3BNG1 76 aa10.5□□□□□ -0.73
VARS-223ENST00000474643 M0R036 132 aa10.5□□□□□ -0.73
VARS-223ENST00000474643 SH2D1AO60880 128 aa10.5□□□□□ -0.73
VARS-223ENST00000474643 ZNF674Q2M3X9 581 aa10.5□□□□□ -0.73
VARS-223ENST00000474643 C18orf15Q96N68 181 aa10.5□□□□□ -0.73
VARS-223ENST00000474643 TRGV4A0A0C4DH28 118 aa10.49□□□□□ -0.73
VARS-223ENST00000474643 PAX4O43316 350 aa10.49□□□□□ -0.73
VARS-223ENST00000474643 IGLV2-8P01709 118 aa10.49□□□□□ -0.73
VARS-223ENST00000474643 ASIPP42127 132 aa10.49□□□□□ -0.73
VARS-223ENST00000474643 MRPS16Q9Y3D3 137 aaKnown RBP10.49□□□□□ -0.73
VARS-223ENST00000474643 ICOSQ9Y6W8 199 aa10.49□□□□□ -0.73
VARS-223ENST00000474643 TMEM218A2RU14 115 aa10.48□□□□□ -0.73
VARS-223ENST00000474643 SFTA3P0C7M3 94 aa10.48□□□□□ -0.73
VARS-223ENST00000474643 ESRGQ1W209 222 aa10.48□□□□□ -0.73
VARS-223ENST00000474643 TMEM241Q24JQ0 296 aa10.48□□□□□ -0.73
VARS-223ENST00000474643 OR4C5Q8NGB2 326 aa10.48□□□□□ -0.73
VARS-223ENST00000474643 RASL10AQ92737 203 aa10.48□□□□□ -0.73
VARS-223ENST00000474643 NAT8Q9UHE5 227 aa10.48□□□□□ -0.73
VARS-223ENST00000474643 TMSB15BA0A087X1C1 80 aa10.47□□□□□ -0.73
VARS-223ENST00000474643 IGKV3D-20A0A0C4DH25 116 aa10.47□□□□□ -0.73
VARS-223ENST00000474643 CRIP1P50238 77 aa10.47□□□□□ -0.73
VARS-223ENST00000474643 PNRC1Q12796 327 aaPredicted RBP10.47□□□□□ -0.73
VARS-223ENST00000474643 SLAQ13239 276 aa10.47□□□□□ -0.73
VARS-223ENST00000474643 ZNF876PQ49A33 203 aa10.47□□□□□ -0.73
VARS-223ENST00000474643 PRR27Q6MZM9 219 aa10.47□□□□□ -0.73
VARS-223ENST00000474643 UPK3BQ9BT76 320 aa10.47□□□□□ -0.73
VARS-223ENST00000474643 SEC11CQ9BY50 192 aa10.47□□□□□ -0.73
VARS-223ENST00000474643 TRAV4A0A0B4J268 109 aa10.46□□□□□ -0.73
VARS-223ENST00000474643 A0A1W2PPQ1 181 aa10.46□□□□□ -0.73
VARS-223ENST00000474643 GRIFINA4D1Z8 144 aa10.46□□□□□ -0.73
VARS-223ENST00000474643 CXCL1P09341 107 aa10.46□□□□□ -0.73
VARS-223ENST00000474643 MGST1P10620 155 aaKnown RBP10.46□□□□□ -0.73
VARS-223ENST00000474643 CEBPGP53567 150 aa10.46□□□□□ -0.73
VARS-223ENST00000474643 FAM231DQ6ZW35 169 aa10.46□□□□□ -0.73
VARS-223ENST00000474643 LINC01551Q86U37 167 aa10.46□□□□□ -0.73
VARS-223ENST00000474643 OCC1Q8TAD7 63 aa10.46□□□□□ -0.73
VARS-223ENST00000474643 ZNF479Q96JC4 524 aa10.46□□□□□ -0.73
VARS-223ENST00000474643 PRO0255Q9UI72 69 aa10.46□□□□□ -0.73
VARS-223ENST00000474643 KIAA1109Q2LD37 5005 aa10.46□□□□□ -0.74
VARS-223ENST00000474643 DNAH11Q96DT5 4516 aa10.45□□□□□ -0.74
VARS-223ENST00000474643 A0A096LPF7 62 aa10.45□□□□□ -0.74
VARS-223ENST00000474643 C19orf71A6NCJ1 209 aa10.45□□□□□ -0.74
VARS-223ENST00000474643 KRBOX1C9JBD0 128 aa10.45□□□□□ -0.74
VARS-223ENST00000474643 H3BVH4 76 aa10.45□□□□□ -0.74
VARS-223ENST00000474643 LINC01559Q495D7 138 aa10.45□□□□□ -0.74
VARS-223ENST00000474643 DNLZQ5SXM8 178 aa10.45□□□□□ -0.74
VARS-223ENST00000474643 C10orf91Q5T1B1 145 aa10.45□□□□□ -0.74
VARS-223ENST00000474643 C9orf85Q96MD7 179 aa10.45□□□□□ -0.74
VARS-223ENST00000474643 HHLA3Q9XRX5 114 aa10.45□□□□□ -0.74
VARS-223ENST00000474643 SIVA1O15304 175 aa10.44□□□□□ -0.74
VARS-223ENST00000474643 RNASE3P12724 160 aaKnown RBP10.44□□□□□ -0.74
VARS-223ENST00000474643 SPATA12Q7Z6I5 190 aa10.44□□□□□ -0.74
VARS-223ENST00000474643 SYT8Q8NBV8 401 aa10.44□□□□□ -0.74
VARS-223ENST00000474643 DAZAP1Q96EP5 407 aaKnown RBP10.44□□□□□ -0.74
VARS-223ENST00000474643 PGPEP1LA6NFU8 196 aa10.43□□□□□ -0.74
VARS-223ENST00000474643 EREGO14944 169 aa10.43□□□□□ -0.74
VARS-223ENST00000474643 RPS20P60866 119 aaKnown RBP10.43□□□□□ -0.74
VARS-223ENST00000474643 FHL2Q14192 279 aa10.43□□□□□ -0.74
VARS-223ENST00000474643 MRPL23Q16540 153 aaKnown RBP10.43□□□□□ -0.74
VARS-223ENST00000474643 CT83Q5H943 113 aa10.43□□□□□ -0.74
VARS-223ENST00000474643 VSIG2Q96IQ7 327 aa10.43□□□□□ -0.74
VARS-223ENST00000474643 IL36BQ9NZH7 164 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms