RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 PHLDA3Q9Y5J5 127 aa4.46□□□□□ -1.7
ATPAF1-204ENST00000474020 IGHV4-4A0A075B6R2 117 aa4.45□□□□□ -1.7
ATPAF1-204ENST00000474020 MUC21A0A0G2JKD1 596 aa4.45□□□□□ -1.7
ATPAF1-204ENST00000474020 MUC21A0A140T8X8 626 aa4.45□□□□□ -1.7
ATPAF1-204ENST00000474020 K7EMI3 77 aa4.45□□□□□ -1.7
ATPAF1-204ENST00000474020 SNAI2O43623 268 aa4.45□□□□□ -1.7
ATPAF1-204ENST00000474020 DUSP14O95147 198 aaKnown RBP4.45□□□□□ -1.7
ATPAF1-204ENST00000474020 TNFRSF6BO95407 300 aa4.45□□□□□ -1.7
ATPAF1-204ENST00000474020 NCR2O95944 276 aa4.45□□□□□ -1.7
ATPAF1-204ENST00000474020 NPYP01303 97 aa4.45□□□□□ -1.7
ATPAF1-204ENST00000474020 PRB4P10163 310 aaPredicted RBP4.45□□□□□ -1.7
ATPAF1-204ENST00000474020 IGLL1P15814 213 aa4.45□□□□□ -1.7
ATPAF1-204ENST00000474020 FCER1GP30273 86 aa4.45□□□□□ -1.7
ATPAF1-204ENST00000474020 KRTAP10-11P60412 298 aa4.45□□□□□ -1.7
ATPAF1-204ENST00000474020 BLCAPP62952 87 aa4.45□□□□□ -1.7
ATPAF1-204ENST00000474020 DEFB112Q30KQ8 113 aa4.45□□□□□ -1.7
ATPAF1-204ENST00000474020 MUC21Q5SSG8 566 aa4.45□□□□□ -1.7
ATPAF1-204ENST00000474020 Q8N8P6 123 aa4.45□□□□□ -1.7
ATPAF1-204ENST00000474020 OR2K2Q8NGT1 345 aa4.45□□□□□ -1.7
ATPAF1-204ENST00000474020 MYOZ3Q8TDC0 251 aa4.45□□□□□ -1.7
ATPAF1-204ENST00000474020 AP1S3Q96PC3 154 aa4.45□□□□□ -1.7
ATPAF1-204ENST00000474020 DPH3P1Q9H4G8 78 aa4.45□□□□□ -1.7
ATPAF1-204ENST00000474020 IGKV3D-20A0A0C4DH25 116 aa4.44□□□□□ -1.7
ATPAF1-204ENST00000474020 H3BVH4 76 aa4.44□□□□□ -1.7
ATPAF1-204ENST00000474020 PRSS1P07477 247 aa4.44□□□□□ -1.7
ATPAF1-204ENST00000474020 LGALS1P09382 135 aaKnown RBP4.44□□□□□ -1.7
ATPAF1-204ENST00000474020 ZNF25P17030 456 aaPredicted RBP4.44□□□□□ -1.7
ATPAF1-204ENST00000474020 RNASE4P34096 147 aaKnown RBP4.44□□□□□ -1.7
ATPAF1-204ENST00000474020 GAGE1Q13065 139 aa4.44□□□□□ -1.7
ATPAF1-204ENST00000474020 SCGB2A2Q13296 93 aa4.44□□□□□ -1.7
ATPAF1-204ENST00000474020 LAGE3Q14657 143 aa4.44□□□□□ -1.7
ATPAF1-204ENST00000474020 ORMDL2Q53FV1 153 aa4.44□□□□□ -1.7
ATPAF1-204ENST00000474020 TMEM97Q5BJF2 176 aa4.44□□□□□ -1.7
ATPAF1-204ENST00000474020 SUMO4Q6EEV6 95 aa4.44□□□□□ -1.7
ATPAF1-204ENST00000474020 FAM159AQ6UWV7 190 aa4.44□□□□□ -1.7
ATPAF1-204ENST00000474020 PRSS57Q6UWY2 283 aa4.44□□□□□ -1.7
ATPAF1-204ENST00000474020 UNQ9165/PRO28630Q6UXU0 137 aa4.44□□□□□ -1.7
ATPAF1-204ENST00000474020 Q71RC1 249 aaPredicted RBP4.44□□□□□ -1.7
ATPAF1-204ENST00000474020 OR9G4Q8NGQ1 327 aa4.44□□□□□ -1.7
ATPAF1-204ENST00000474020 ODF3Q96PU9 254 aa4.44□□□□□ -1.7
ATPAF1-204ENST00000474020 NBASA2RRP1 2371 aa4.44□□□□□ -1.7
ATPAF1-204ENST00000474020 HIVEP3Q5T1R4 2406 aa4.44□□□□□ -1.7
ATPAF1-204ENST00000474020 SETD2Q9BYW2 2564 aaPredicted RBP4.44□□□□□ -1.7
ATPAF1-204ENST00000474020 ARHGAP32A7KAX9 2087 aa4.44□□□□□ -1.7
ATPAF1-204ENST00000474020 SPTBN1Q01082 2364 aaKnown RBP4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 MGAQ8IWI9 3026 aa4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 ATMQ13315 3056 aa4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 IGKV3-7A0A075B6H7 116 aa4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 hDV102S1A0JD36 115 aa4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 A6NDN8 102 aa4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 LINC01546A6NGU7 62 aa4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 SMKR1H3BMG3 65 aa4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 J3KRW8 73 aa4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 M0R381 172 aa4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 LGALS9O00182 355 aa4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 SOCS3O14543 225 aa4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 TRBV12-3P01733 135 aa4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 IGHV4-59P01825 116 aa4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 MGPP08493 103 aa4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 RNF224P0DH78 156 aa4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 COX8AP10176 69 aa4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 PSMB8P28062 276 aa4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 HINT1P49773 126 aaPredicted RBP4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 CFHR3Q02985 330 aa4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 DEFB113Q30KQ7 82 aa4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 Q5PR19 223 aa4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 LINC00173Q6ZV60 143 aa4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 RNF185Q96GF1 192 aa4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 C20orf78Q9BR46 151 aa4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 SCRT2Q9NQ03 307 aa4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 PEMTQ9UBM1 199 aa4.43□□□□□ -1.7
ATPAF1-204ENST00000474020 ABCA1O95477 2261 aa4.42□□□□□ -1.7
ATPAF1-204ENST00000474020 WNK2Q9Y3S1 2297 aa4.42□□□□□ -1.7
ATPAF1-204ENST00000474020 FLNCQ14315 2725 aa4.42□□□□□ -1.7
ATPAF1-204ENST00000474020 A1L4Q6 167 aa4.42□□□□□ -1.7
ATPAF1-204ENST00000474020 C7orf71A4D174 169 aa4.42□□□□□ -1.7
ATPAF1-204ENST00000474020 PRSS47A8MTI9 375 aa4.42□□□□□ -1.7
ATPAF1-204ENST00000474020 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.42□□□□□ -1.7
ATPAF1-204ENST00000474020 SIVA1O15304 175 aa4.42□□□□□ -1.7
ATPAF1-204ENST00000474020 DLEU1O43261 78 aa4.42□□□□□ -1.7
ATPAF1-204ENST00000474020 DPM2O94777 84 aa4.42□□□□□ -1.7
ATPAF1-204ENST00000474020 EVI2AP22794 236 aa4.42□□□□□ -1.7
ATPAF1-204ENST00000474020 PLNP26678 52 aa4.42□□□□□ -1.7
ATPAF1-204ENST00000474020 SEC11AP67812 179 aa4.42□□□□□ -1.7
ATPAF1-204ENST00000474020 MAJINQ3KP22 176 aa4.42□□□□□ -1.7
ATPAF1-204ENST00000474020 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.42□□□□□ -1.7
ATPAF1-204ENST00000474020 DEFB125Q8N687 156 aa4.42□□□□□ -1.7
ATPAF1-204ENST00000474020 ZFAND2AQ8N6M9 145 aa4.42□□□□□ -1.7
ATPAF1-204ENST00000474020 ORAOV1Q8WV07 137 aa4.42□□□□□ -1.7
ATPAF1-204ENST00000474020 UBE2E2Q96LR5 201 aa4.42□□□□□ -1.7
ATPAF1-204ENST00000474020 SMIM2Q9BVW6 85 aa4.42□□□□□ -1.7
ATPAF1-204ENST00000474020 MSRB1Q9NZV6 116 aa4.42□□□□□ -1.7
ATPAF1-204ENST00000474020 LRRK2Q5S007 2527 aa4.42□□□□□ -1.7
ATPAF1-204ENST00000474020 NBPF19A0A087WUL8 3843 aa4.42□□□□□ -1.7
ATPAF1-204ENST00000474020 UTP20O75691 2785 aaKnown RBP4.41□□□□□ -1.7
ATPAF1-204ENST00000474020 IGKCP01834 107 aa4.41□□□□□ -1.7
ATPAF1-204ENST00000474020 IGHV4-31P0DP07 118 aa4.41□□□□□ -1.7
ATPAF1-204ENST00000474020 SUMO2P61956 95 aaKnown RBP4.41□□□□□ -1.7
ATPAF1-204ENST00000474020 HSD52Q0P140 79 aa4.41□□□□□ -1.7
ATPAF1-204ENST00000474020 ANXA2RQ3ZCQ2 193 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms