RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 P0DMU3 169 aa13.79□□□□□ -0.2
HDAC7-220ENST00000471235 FAM231AP0DMU4 169 aa13.79□□□□□ -0.2
HDAC7-220ENST00000471235 FAM231CP0DMU5 169 aa13.79□□□□□ -0.2
HDAC7-220ENST00000471235 RPL19P84098 196 aaKnown RBP13.79□□□□□ -0.2
HDAC7-220ENST00000471235 FHL2Q14192 279 aa13.79□□□□□ -0.2
HDAC7-220ENST00000471235 ZNF876PQ49A33 203 aa13.79□□□□□ -0.2
HDAC7-220ENST00000471235 PTH2Q96A98 100 aa13.79□□□□□ -0.2
HDAC7-220ENST00000471235 SMIM12Q96EX1 92 aa13.79□□□□□ -0.2
HDAC7-220ENST00000471235 VSIG2Q96IQ7 327 aa13.79□□□□□ -0.2
HDAC7-220ENST00000471235 FAM210AQ96ND0 272 aa13.79□□□□□ -0.2
HDAC7-220ENST00000471235 TMEM250H0YL14 139 aa13.78□□□□□ -0.2
HDAC7-220ENST00000471235 MGST1P10620 155 aaKnown RBP13.78□□□□□ -0.2
HDAC7-220ENST00000471235 H3BNG1 76 aa13.77□□□□□ -0.21
HDAC7-220ENST00000471235 OR4C5Q8NGB2 326 aa13.77□□□□□ -0.21
HDAC7-220ENST00000471235 EIF5A2Q9GZV4 153 aaKnown RBP13.77□□□□□ -0.21
HDAC7-220ENST00000471235 PARLQ9H300 379 aa13.77□□□□□ -0.21
HDAC7-220ENST00000471235 TRGV4A0A0C4DH28 118 aa13.76□□□□□ -0.21
HDAC7-220ENST00000471235 CXCL1P09341 107 aa13.76□□□□□ -0.21
HDAC7-220ENST00000471235 ARMS2P0C7Q2 107 aa13.76□□□□□ -0.21
HDAC7-220ENST00000471235 PRO0255Q9UI72 69 aa13.76□□□□□ -0.21
HDAC7-220ENST00000471235 RS1O15537 224 aa13.75□□□□□ -0.21
HDAC7-220ENST00000471235 CRYBA4P53673 196 aa13.75□□□□□ -0.21
HDAC7-220ENST00000471235 UBE2DNLQ8IWF7 75 aa13.75□□□□□ -0.21
HDAC7-220ENST00000471235 SCRT2Q9NQ03 307 aa13.75□□□□□ -0.21
HDAC7-220ENST00000471235 KMT2AQ03164 3969 aa13.75□□□□□ -0.21
HDAC7-220ENST00000471235 C19orf71A6NCJ1 209 aa13.74□□□□□ -0.21
HDAC7-220ENST00000471235 PAX4O43316 350 aa13.74□□□□□ -0.21
HDAC7-220ENST00000471235 NDUFS6O75380 124 aaKnown RBP13.74□□□□□ -0.21
HDAC7-220ENST00000471235 CFAP126Q5VTH2 177 aa13.74□□□□□ -0.21
HDAC7-220ENST00000471235 HHLA3Q9XRX5 114 aa13.74□□□□□ -0.21
HDAC7-220ENST00000471235 MED14OSP0DP75 135 aa13.73□□□□□ -0.21
HDAC7-220ENST00000471235 SLAQ13239 276 aa13.73□□□□□ -0.21
HDAC7-220ENST00000471235 PIK3CD-AS1Q5SR53 167 aa13.73□□□□□ -0.21
HDAC7-220ENST00000471235 A0A096LPF7 62 aa13.72□□□□□ -0.21
HDAC7-220ENST00000471235 SRP19P09132 144 aaKnown RBP13.72□□□□□ -0.21
HDAC7-220ENST00000471235 CEBPGP53567 150 aa13.72□□□□□ -0.21
HDAC7-220ENST00000471235 RNF212Q495C1 297 aa13.72□□□□□ -0.21
HDAC7-220ENST00000471235 BIN3Q9NQY0 253 aa13.72□□□□□ -0.21
HDAC7-220ENST00000471235 PHLDA3Q9Y5J5 127 aa13.72□□□□□ -0.21
HDAC7-220ENST00000471235 K7EN84 100 aa13.71□□□□□ -0.21
HDAC7-220ENST00000471235 GATA1P15976 413 aaPredicted RBP13.71□□□□□ -0.21
HDAC7-220ENST00000471235 DMRTA1Q5VZB9 504 aa13.71□□□□□ -0.21
HDAC7-220ENST00000471235 SYT8Q8NBV8 401 aa13.71□□□□□ -0.21
HDAC7-220ENST00000471235 OCC1Q8TAD7 63 aa13.71□□□□□ -0.21
HDAC7-220ENST00000471235 DAZAP1Q96EP5 407 aaKnown RBP13.71□□□□□ -0.21
HDAC7-220ENST00000471235 ICOSQ9Y6W8 199 aa13.71□□□□□ -0.21
HDAC7-220ENST00000471235 A8MWV9 139 aa13.7□□□□□ -0.22
HDAC7-220ENST00000471235 ZFP82Q8N141 532 aa13.7□□□□□ -0.22
HDAC7-220ENST00000471235 OR2D3Q8NGH3 330 aa13.7□□□□□ -0.22
HDAC7-220ENST00000471235 JPT2Q9H910 190 aa13.7□□□□□ -0.22
HDAC7-220ENST00000471235 IGHV3-73A0A0B4J1V6 119 aa13.69□□□□□ -0.22
HDAC7-220ENST00000471235 M0R381 172 aa13.69□□□□□ -0.22
HDAC7-220ENST00000471235 SNAI2O43623 268 aa13.69□□□□□ -0.22
HDAC7-220ENST00000471235 CIDEAO60543 219 aa13.69□□□□□ -0.22
HDAC7-220ENST00000471235 P01737 135 aa13.69□□□□□ -0.22
HDAC7-220ENST00000471235 OR10AG1Q8NH19 301 aa13.69□□□□□ -0.22
HDAC7-220ENST00000471235 LINC00588Q9Y4M8 146 aa13.69□□□□□ -0.22
HDAC7-220ENST00000471235 NXPH4O95158 308 aa13.68□□□□□ -0.22
HDAC7-220ENST00000471235 OR5AL1P0C617 328 aa13.68□□□□□ -0.22
HDAC7-220ENST00000471235 GZMBP10144 247 aa13.68□□□□□ -0.22
HDAC7-220ENST00000471235 CCL18P55774 89 aa13.68□□□□□ -0.22
HDAC7-220ENST00000471235 RPS20P60866 119 aaKnown RBP13.68□□□□□ -0.22
HDAC7-220ENST00000471235 SMIM7Q9BQ49 75 aa13.68□□□□□ -0.22
HDAC7-220ENST00000471235 SAMD10Q9BYL1 202 aa13.68□□□□□ -0.22
HDAC7-220ENST00000471235 LOC100131303A0A0U1RQF7 123 aa13.67□□□□□ -0.22
HDAC7-220ENST00000471235 C9JQL5 133 aa13.67□□□□□ -0.22
HDAC7-220ENST00000471235 GYPEP15421 78 aa13.67□□□□□ -0.22
HDAC7-220ENST00000471235 FAM3BP58499 235 aaPredicted RBP13.67□□□□□ -0.22
HDAC7-220ENST00000471235 SRSF3P84103 164 aaKnown RBP13.67□□□□□ -0.22
HDAC7-220ENST00000471235 UFSP1Q6NVU6 142 aa13.67□□□□□ -0.22
HDAC7-220ENST00000471235 NUDT10Q8NFP7 164 aa13.67□□□□□ -0.22
HDAC7-220ENST00000471235 NUDT11Q96G61 164 aa13.67□□□□□ -0.22
HDAC7-220ENST00000471235 SSBP4Q9BWG4 385 aaPredicted RBP13.67□□□□□ -0.22
HDAC7-220ENST00000471235 RNASE7Q9H1E1 156 aaKnown RBP13.67□□□□□ -0.22
HDAC7-220ENST00000471235 K7EQD1 137 aa13.66□□□□□ -0.22
HDAC7-220ENST00000471235 IGLC6P0CF74 106 aa13.66□□□□□ -0.22
HDAC7-220ENST00000471235 ESRGQ1W209 222 aa13.66□□□□□ -0.22
HDAC7-220ENST00000471235 ZFP2Q6ZN57 461 aa13.66□□□□□ -0.22
HDAC7-220ENST00000471235 SLC25A29Q8N8R3 303 aa13.66□□□□□ -0.22
HDAC7-220ENST00000471235 SFRP2Q96HF1 295 aa13.66□□□□□ -0.22
HDAC7-220ENST00000471235 LY96Q9Y6Y9 160 aa13.66□□□□□ -0.22
HDAC7-220ENST00000471235 MUC21A0A0G2JKD1 596 aa13.65□□□□□ -0.22
HDAC7-220ENST00000471235 MUC21A0A140T8X8 626 aa13.65□□□□□ -0.22
HDAC7-220ENST00000471235 ZNF727A8MUV8 499 aa13.65□□□□□ -0.22
HDAC7-220ENST00000471235 RHODO00212 210 aa13.65□□□□□ -0.22
HDAC7-220ENST00000471235 MRPL23Q16540 153 aaKnown RBP13.65□□□□□ -0.22
HDAC7-220ENST00000471235 FER1L6-AS1Q8NA97 138 aa13.65□□□□□ -0.22
HDAC7-220ENST00000471235 RPP21Q9H633 154 aaKnown RBP13.65□□□□□ -0.22
HDAC7-220ENST00000471235 TRBV6-4A0A1B0GX49 114 aa13.64□□□□□ -0.23
HDAC7-220ENST00000471235 SRIP30626 198 aa13.64□□□□□ -0.23
HDAC7-220ENST00000471235 PEA15Q15121 130 aa13.64□□□□□ -0.23
HDAC7-220ENST00000471235 RHOHQ15669 191 aa13.64□□□□□ -0.23
HDAC7-220ENST00000471235 Q6ZSN1 163 aa13.64□□□□□ -0.23
HDAC7-220ENST00000471235 ZNRF2Q8NHG8 242 aa13.64□□□□□ -0.23
HDAC7-220ENST00000471235 IGLV2-18A0A075B6J9 118 aa13.63□□□□□ -0.23
HDAC7-220ENST00000471235 A0A087WWL8 130 aa13.63□□□□□ -0.23
HDAC7-220ENST00000471235 XKRY2A2RUG3 117 aa13.63□□□□□ -0.23
HDAC7-220ENST00000471235 IFITM2Q01629 132 aa13.63□□□□□ -0.23
HDAC7-220ENST00000471235 FAM74A4Q5TZK3 123 aa13.63□□□□□ -0.23
HDAC7-220ENST00000471235 SPANXN1Q5VSR9 72 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms