RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 E9PCH4 1651 aa0.69□□□□□ -2.3
SSB-209ENST00000470621 CHD3Q12873 2000 aaKnown RBP0.69□□□□□ -2.3
SSB-209ENST00000470621 ZNF518AQ6AHZ1 1483 aa0.69□□□□□ -2.3
SSB-209ENST00000470621 TRAV12-2A0A075B6T6 113 aa0.69□□□□□ -2.3
SSB-209ENST00000470621 A0A0J9YY99 117 aa0.69□□□□□ -2.3
SSB-209ENST00000470621 A0A1W2PRS3 328 aa0.69□□□□□ -2.3
SSB-209ENST00000470621 MIF4GDA9UHW6 222 aaKnown RBP0.69□□□□□ -2.3
SSB-209ENST00000470621 FAM25AB3EWG3 89 aa0.69□□□□□ -2.3
SSB-209ENST00000470621 FAM25CB3EWG5 89 aa0.69□□□□□ -2.3
SSB-209ENST00000470621 FAM25GB3EWG6 89 aa0.69□□□□□ -2.3
SSB-209ENST00000470621 ATP6V1G2-DDX39BF2Z307 99 aa0.69□□□□□ -2.3
SSB-209ENST00000470621 J3QLW9 94 aa0.69□□□□□ -2.3
SSB-209ENST00000470621 DNAL4O96015 105 aa0.69□□□□□ -2.3
SSB-209ENST00000470621 IFNGP01579 166 aa0.69□□□□□ -2.3
SSB-209ENST00000470621 RBP4P02753 201 aa0.69□□□□□ -2.3
SSB-209ENST00000470621 APODP05090 189 aa0.69□□□□□ -2.3
SSB-209ENST00000470621 SLC25A6P12236 298 aa0.69□□□□□ -2.3
SSB-209ENST00000470621 IL7P13232 177 aa0.69□□□□□ -2.3
SSB-209ENST00000470621 PDE6GP18545 87 aa0.69□□□□□ -2.3
SSB-209ENST00000470621 LSM3P62310 102 aaKnown RBP0.69□□□□□ -2.3
SSB-209ENST00000470621 FAM74A1Q5RGS3 127 aa0.69□□□□□ -2.3
SSB-209ENST00000470621 SCIMPQ6UWF3 145 aa0.69□□□□□ -2.3
SSB-209ENST00000470621 LYPD5Q6UWN5 251 aa0.69□□□□□ -2.3
SSB-209ENST00000470621 SBSPONQ8IVN8 264 aa0.69□□□□□ -2.3
SSB-209ENST00000470621 SNRNP25Q9BV90 132 aaKnown RBP0.69□□□□□ -2.3
SSB-209ENST00000470621 SEC11CQ9BY50 192 aa0.69□□□□□ -2.3
SSB-209ENST00000470621 AGPAT4-IT1Q9H0P7 198 aa0.69□□□□□ -2.3
SSB-209ENST00000470621 WFDC10AQ9H1F0 79 aa0.69□□□□□ -2.3
SSB-209ENST00000470621 NDUFA12Q9UI09 145 aa0.69□□□□□ -2.3
SSB-209ENST00000470621 BOKQ9UMX3 212 aaPredicted RBP0.69□□□□□ -2.3
SSB-209ENST00000470621 RIMS1Q86UR5 1692 aaKnown RBP0.69□□□□□ -2.3
SSB-209ENST00000470621 NINQ8N4C6 2090 aa0.68□□□□□ -2.3
SSB-209ENST00000470621 NUPR2A6NF83 97 aa0.68□□□□□ -2.3
SSB-209ENST00000470621 JMJD7-PLA2G4BH0Y9G9 81 aa0.68□□□□□ -2.3
SSB-209ENST00000470621 H3BRM9 83 aa0.68□□□□□ -2.3
SSB-209ENST00000470621 CORTO00230 105 aa0.68□□□□□ -2.3
SSB-209ENST00000470621 PIRTP0C851 137 aa0.68□□□□□ -2.3
SSB-209ENST00000470621 LINC00322Q6ZN03 302 aaPredicted RBP0.68□□□□□ -2.3
SSB-209ENST00000470621 IDO2Q6ZQW0 420 aa0.68□□□□□ -2.3
SSB-209ENST00000470621 Q6ZS92 163 aa0.68□□□□□ -2.3
SSB-209ENST00000470621 SMG6Q86US8 1419 aaKnown RBP0.68□□□□□ -2.3
SSB-209ENST00000470621 VSTM2AQ8TAG5 236 aa0.68□□□□□ -2.3
SSB-209ENST00000470621 DYNLRB2Q8TF09 96 aa0.68□□□□□ -2.3
SSB-209ENST00000470621 TSKUQ8WUA8 353 aa0.68□□□□□ -2.3
SSB-209ENST00000470621 C4orf3Q8WVX3 66 aa0.68□□□□□ -2.3
SSB-209ENST00000470621 PP6455Q8WZ26 134 aa0.68□□□□□ -2.3
SSB-209ENST00000470621 C14orf144Q96I85 54 aa0.68□□□□□ -2.3
SSB-209ENST00000470621 PDCD10Q9BUL8 212 aa0.68□□□□□ -2.3
SSB-209ENST00000470621 SAR1AQ9NR31 198 aa0.68□□□□□ -2.3
SSB-209ENST00000470621 TAS2R8Q9NYW2 309 aa0.68□□□□□ -2.3
SSB-209ENST00000470621 ROBO1Q9Y6N7 1651 aa0.68□□□□□ -2.3
SSB-209ENST00000470621 A2ML1A8K2U0 1454 aa0.67□□□□□ -2.3
SSB-209ENST00000470621 CFTRP13569 1480 aa0.67□□□□□ -2.3
SSB-209ENST00000470621 MYH9P35579 1960 aaKnown RBP0.67□□□□□ -2.3
SSB-209ENST00000470621 LAMA4Q16363 1823 aa0.67□□□□□ -2.3
SSB-209ENST00000470621 TRAV17A0A0B4J275 112 aa0.67□□□□□ -2.3
SSB-209ENST00000470621 NBDYA0A0U1RRE5 68 aa0.67□□□□□ -2.3
SSB-209ENST00000470621 FAM92AA1XBS5 289 aa0.67□□□□□ -2.3
SSB-209ENST00000470621 BBIP1A8MTZ0 92 aa0.67□□□□□ -2.3
SSB-209ENST00000470621 F6UZH7 168 aa0.67□□□□□ -2.3
SSB-209ENST00000470621 IGHV3-30P01768 117 aa0.67□□□□□ -2.3
SSB-209ENST00000470621 IGHV3-30-5P0DP03 117 aa0.67□□□□□ -2.3
SSB-209ENST00000470621 FGF7P21781 194 aa0.67□□□□□ -2.3
SSB-209ENST00000470621 GUCA1AP43080 201 aaPredicted RBP0.67□□□□□ -2.3
SSB-209ENST00000470621 NPC2P61916 151 aa0.67□□□□□ -2.3
SSB-209ENST00000470621 BTG2P78543 158 aa0.67□□□□□ -2.3
SSB-209ENST00000470621 RHOHQ15669 191 aa0.67□□□□□ -2.3
SSB-209ENST00000470621 IQCJQ1A5X6 159 aa0.67□□□□□ -2.3
SSB-209ENST00000470621 ATOH7Q8N100 152 aa0.67□□□□□ -2.3
SSB-209ENST00000470621 KCNRGQ8N5I3 272 aa0.67□□□□□ -2.3
SSB-209ENST00000470621 C10orf82Q8WW14 230 aa0.67□□□□□ -2.3
SSB-209ENST00000470621 TMEM203Q969S6 136 aa0.67□□□□□ -2.3
SSB-209ENST00000470621 C12orf57Q99622 126 aa0.67□□□□□ -2.3
SSB-209ENST00000470621 CCDC167Q9P0B6 97 aa0.67□□□□□ -2.3
SSB-209ENST00000470621 LAMB1P07942 1786 aa0.67□□□□□ -2.3
SSB-209ENST00000470621 ZGRF1Q86YA3 2104 aa0.67□□□□□ -2.3
SSB-209ENST00000470621 PZPP20742 1482 aa0.67□□□□□ -2.3
SSB-209ENST00000470621 EIF4G3O43432 1585 aaKnown RBP0.66□□□□□ -2.3
SSB-209ENST00000470621 TRBV6-7A0A0A0MS04 114 aa0.66□□□□□ -2.3
SSB-209ENST00000470621 LOC101927531A0A1B0GV80 90 aa0.66□□□□□ -2.3
SSB-209ENST00000470621 TMEM30CPA0ZSE6 113 aa0.66□□□□□ -2.3
SSB-209ENST00000470621 OOSP1A8MZH6 123 aa0.66□□□□□ -2.3
SSB-209ENST00000470621 YPEL1O60688 119 aa0.66□□□□□ -2.3
SSB-209ENST00000470621 S100A1P23297 94 aa0.66□□□□□ -2.3
SSB-209ENST00000470621 S100PP25815 95 aa0.66□□□□□ -2.3
SSB-209ENST00000470621 RPL37AP61513 92 aaKnown RBP0.66□□□□□ -2.3
SSB-209ENST00000470621 INSL4Q14641 139 aa0.66□□□□□ -2.3
SSB-209ENST00000470621 GDF5OSQ5U4N7 250 aa0.66□□□□□ -2.3
SSB-209ENST00000470621 Q6AWC8 147 aa0.66□□□□□ -2.3
SSB-209ENST00000470621 C3orf62Q6ZUJ4 267 aa0.66□□□□□ -2.3
SSB-209ENST00000470621 DEFB132Q7Z7B7 95 aa0.66□□□□□ -2.3
SSB-209ENST00000470621 Q8N8P6 123 aa0.66□□□□□ -2.3
SSB-209ENST00000470621 IFI27L1Q96BM0 104 aa0.66□□□□□ -2.3
SSB-209ENST00000470621 DSCR8Q96T75 97 aa0.66□□□□□ -2.3
SSB-209ENST00000470621 RERGLQ9H628 205 aa0.66□□□□□ -2.3
SSB-209ENST00000470621 TMEM242Q9NWH2 141 aa0.66□□□□□ -2.3
SSB-209ENST00000470621 COA4Q9NYJ1 87 aa0.66□□□□□ -2.3
SSB-209ENST00000470621 MRPL36Q9P0J6 103 aaKnown RBP0.66□□□□□ -2.3
SSB-209ENST00000470621 GNG8Q9UK08 70 aa0.66□□□□□ -2.3
SSB-209ENST00000470621 MYOM2P54296 1465 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms