RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 GOLT1AQ6ZVE7 132 aa8.62□□□□□ -1.03
HDAC6-217ENST00000469223 DERL1Q9BUN8 251 aa8.62□□□□□ -1.03
HDAC6-217ENST00000469223 H7BYZ3 331 aa8.61□□□□□ -1.03
HDAC6-217ENST00000469223 SLC17A3O00476 420 aa8.61□□□□□ -1.03
HDAC6-217ENST00000469223 PRM2P04554 102 aa8.61□□□□□ -1.03
HDAC6-217ENST00000469223 MGST1P10620 155 aaKnown RBP8.61□□□□□ -1.03
HDAC6-217ENST00000469223 ASIPP42127 132 aa8.61□□□□□ -1.03
HDAC6-217ENST00000469223 GNG5P63218 68 aa8.61□□□□□ -1.03
HDAC6-217ENST00000469223 FLI1Q01543 452 aaPredicted RBP8.61□□□□□ -1.03
HDAC6-217ENST00000469223 TMEM78Q5T7P6 136 aa8.61□□□□□ -1.03
HDAC6-217ENST00000469223 ZNF738Q8NE65 137 aa8.61□□□□□ -1.03
HDAC6-217ENST00000469223 OR10J6PQ8NGY7 276 aa8.61□□□□□ -1.03
HDAC6-217ENST00000469223 DAZAP1Q96EP5 407 aaKnown RBP8.61□□□□□ -1.03
HDAC6-217ENST00000469223 TMEM208Q9BTX3 173 aa8.61□□□□□ -1.03
HDAC6-217ENST00000469223 FAM30AQ9NZY2 134 aa8.61□□□□□ -1.03
HDAC6-217ENST00000469223 IGLV5-52A0A0A0MRZ9 124 aa8.6□□□□□ -1.03
HDAC6-217ENST00000469223 KRTAP9-6A0A140TA67 174 aa8.6□□□□□ -1.03
HDAC6-217ENST00000469223 FOXI2Q6ZQN5 318 aa8.6□□□□□ -1.03
HDAC6-217ENST00000469223 OR4B1Q8NGF8 309 aa8.6□□□□□ -1.03
HDAC6-217ENST00000469223 ISOC2Q96AB3 205 aa8.6□□□□□ -1.03
HDAC6-217ENST00000469223 SFRP2Q96HF1 295 aa8.6□□□□□ -1.03
HDAC6-217ENST00000469223 CLUHP3Q96NS8 147 aa8.6□□□□□ -1.03
HDAC6-217ENST00000469223 TRAV26-1A0A087WT03 109 aa8.59□□□□□ -1.03
HDAC6-217ENST00000469223 ZNF705GA8MUZ8 300 aaPredicted RBP8.59□□□□□ -1.03
HDAC6-217ENST00000469223 LTAP01374 205 aa8.59□□□□□ -1.03
HDAC6-217ENST00000469223 BTN1A1Q13410 526 aa8.59□□□□□ -1.03
HDAC6-217ENST00000469223 PRNTQ86SH4 94 aa8.59□□□□□ -1.03
HDAC6-217ENST00000469223 Q86TA4 180 aa8.59□□□□□ -1.03
HDAC6-217ENST00000469223 TMEM183AQ8IXX5 376 aa8.59□□□□□ -1.03
HDAC6-217ENST00000469223 OR10G8Q8NGN5 311 aa8.59□□□□□ -1.03
HDAC6-217ENST00000469223 OCC1Q8TAD7 63 aa8.59□□□□□ -1.03
HDAC6-217ENST00000469223 IGF2BP2-AS1Q96M15 143 aa8.59□□□□□ -1.03
HDAC6-217ENST00000469223 IMMP2LQ96T52 175 aa8.59□□□□□ -1.03
HDAC6-217ENST00000469223 SAV1Q9H4B6 383 aaPredicted RBP8.59□□□□□ -1.03
HDAC6-217ENST00000469223 PSG8Q9UQ74 426 aa8.59□□□□□ -1.03
HDAC6-217ENST00000469223 A0A0J9YY99 117 aa8.58□□□□□ -1.04
HDAC6-217ENST00000469223 M0R3E3 92 aa8.58□□□□□ -1.04
HDAC6-217ENST00000469223 SOCS3O14543 225 aa8.58□□□□□ -1.04
HDAC6-217ENST00000469223 GCGP01275 180 aa8.58□□□□□ -1.04
HDAC6-217ENST00000469223 PRB4P10163 310 aaPredicted RBP8.58□□□□□ -1.04
HDAC6-217ENST00000469223 IBA57Q5T440 356 aaKnown RBP8.58□□□□□ -1.04
HDAC6-217ENST00000469223 EBLN2Q6P2I7 272 aa8.58□□□□□ -1.04
HDAC6-217ENST00000469223 LINC00477Q96M19 166 aa8.58□□□□□ -1.04
HDAC6-217ENST00000469223 OSTCQ9NRP0 149 aa8.58□□□□□ -1.04
HDAC6-217ENST00000469223 LENEPQ9Y5L5 61 aa8.58□□□□□ -1.04
HDAC6-217ENST00000469223 TRBV20OR9-2A0A075B6H5 130 aa8.57□□□□□ -1.04
HDAC6-217ENST00000469223 TRAV34A0A0B4J273 112 aa8.57□□□□□ -1.04
HDAC6-217ENST00000469223 XKRY2A2RUG3 117 aa8.57□□□□□ -1.04
HDAC6-217ENST00000469223 CBY3A6NI87 242 aa8.57□□□□□ -1.04
HDAC6-217ENST00000469223 ATRAIDQ6UW56 229 aa8.57□□□□□ -1.04
HDAC6-217ENST00000469223 FAM231DQ6ZW35 169 aa8.57□□□□□ -1.04
HDAC6-217ENST00000469223 PPP1R14DQ9NXH3 145 aa8.57□□□□□ -1.04
HDAC6-217ENST00000469223 TRBV7-9A0A0J9YWB2 115 aa8.56□□□□□ -1.04
HDAC6-217ENST00000469223 PLAC8L1A1L4L8 177 aa8.56□□□□□ -1.04
HDAC6-217ENST00000469223 SIVA1O15304 175 aa8.56□□□□□ -1.04
HDAC6-217ENST00000469223 DUSP14O95147 198 aaKnown RBP8.56□□□□□ -1.04
HDAC6-217ENST00000469223 P01737 135 aa8.56□□□□□ -1.04
HDAC6-217ENST00000469223 ZNF138P52744 262 aa8.56□□□□□ -1.04
HDAC6-217ENST00000469223 KRTAP10-4P60372 401 aaPredicted RBP8.56□□□□□ -1.04
HDAC6-217ENST00000469223 OR5I1Q13606 314 aa8.56□□□□□ -1.04
HDAC6-217ENST00000469223 PRR27Q6MZM9 219 aa8.56□□□□□ -1.04
HDAC6-217ENST00000469223 NFE4Q86UQ8 179 aa8.56□□□□□ -1.04
HDAC6-217ENST00000469223 LINC00479Q96M42 142 aa8.56□□□□□ -1.04
HDAC6-217ENST00000469223 ZNF492Q9P255 531 aa8.56□□□□□ -1.04
HDAC6-217ENST00000469223 TRAV9-1A0A075B6T8 112 aa8.55□□□□□ -1.04
HDAC6-217ENST00000469223 IGKV2-40A0A087WW87 121 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-217ENST00000469223 TRAV8-2A0A0B4J237 113 aa8.55□□□□□ -1.04
HDAC6-217ENST00000469223 PGPEP1LA6NFU8 196 aa8.55□□□□□ -1.04
HDAC6-217ENST00000469223 F6UB75 175 aa8.55□□□□□ -1.04
HDAC6-217ENST00000469223 GATCO43716 136 aaKnown RBP8.55□□□□□ -1.04
HDAC6-217ENST00000469223 SCO1O75880 301 aa8.55□□□□□ -1.04
HDAC6-217ENST00000469223 IGKV2D-40P01614 121 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-217ENST00000469223 SMUG1Q53HV7 270 aa8.55□□□□□ -1.04
HDAC6-217ENST00000469223 C9orf47Q6ZRZ4 202 aa8.55□□□□□ -1.04
HDAC6-217ENST00000469223 RNF182Q8N6D2 247 aa8.55□□□□□ -1.04
HDAC6-217ENST00000469223 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-217ENST00000469223 MLST8Q9BVC4 326 aa8.55□□□□□ -1.04
HDAC6-217ENST00000469223 TRAV8-1A0A0A6YYK1 113 aa8.54□□□□□ -1.04
HDAC6-217ENST00000469223 A0A0J9YX75 114 aa8.54□□□□□ -1.04
HDAC6-217ENST00000469223 IGLV2-11P01706 119 aa8.54□□□□□ -1.04
HDAC6-217ENST00000469223 CT83Q5H943 113 aa8.54□□□□□ -1.04
HDAC6-217ENST00000469223 FAM162BQ5T6X4 162 aa8.54□□□□□ -1.04
HDAC6-217ENST00000469223 CBLN2Q8IUK8 224 aa8.54□□□□□ -1.04
HDAC6-217ENST00000469223 SGK494Q96LW2 274 aa8.54□□□□□ -1.04
HDAC6-217ENST00000469223 A8MWL6 223 aa8.53□□□□□ -1.04
HDAC6-217ENST00000469223 NPIPB6E9PJ23 425 aa8.53□□□□□ -1.04
HDAC6-217ENST00000469223 K7EN84 100 aa8.53□□□□□ -1.04
HDAC6-217ENST00000469223 IGLV2-8P01709 118 aa8.53□□□□□ -1.04
HDAC6-217ENST00000469223 AZU1P20160 251 aa8.53□□□□□ -1.04
HDAC6-217ENST00000469223 TSPOP30536 169 aa8.53□□□□□ -1.04
HDAC6-217ENST00000469223 RPS20P60866 119 aaKnown RBP8.53□□□□□ -1.04
HDAC6-217ENST00000469223 HIST1H1AQ02539 215 aaPredicted RBP8.53□□□□□ -1.04
HDAC6-217ENST00000469223 COX19Q49B96 90 aa8.53□□□□□ -1.04
HDAC6-217ENST00000469223 IGFL4Q6B9Z1 124 aa8.53□□□□□ -1.04
HDAC6-217ENST00000469223 COX8CQ7Z4L0 72 aa8.53□□□□□ -1.04
HDAC6-217ENST00000469223 NHLRC2Q8NBF2 726 aa8.53□□□□□ -1.04
HDAC6-217ENST00000469223 OR8A1Q8NGG7 326 aa8.53□□□□□ -1.04
HDAC6-217ENST00000469223 RPP21Q9H633 154 aaKnown RBP8.53□□□□□ -1.04
HDAC6-217ENST00000469223 IL36BQ9NZH7 164 aa8.53□□□□□ -1.04
HDAC6-217ENST00000469223 FAM231BA6NCW3 169 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms