RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 GAGE13Q4V321 117 aa10.65□□□□□ -0.7
BRAT1-203ENST00000467558 SFTA2Q6UW10 78 aa10.65□□□□□ -0.7
BRAT1-203ENST00000467558 RNASE1P07998 156 aaKnown RBP10.65□□□□□ -0.71
BRAT1-203ENST00000467558 TIMM21Q9BVV7 248 aa10.65□□□□□ -0.71
BRAT1-203ENST00000467558 IGHV4OR15-8A0A075B7B6 117 aa10.64□□□□□ -0.71
BRAT1-203ENST00000467558 A0A087WW49 117 aa10.64□□□□□ -0.71
BRAT1-203ENST00000467558 GAGE12BA1L429 117 aa10.64□□□□□ -0.71
BRAT1-203ENST00000467558 GAGE7O76087 117 aa10.64□□□□□ -0.71
BRAT1-203ENST00000467558 GAGE12FP0CL80 117 aa10.64□□□□□ -0.71
BRAT1-203ENST00000467558 GAGE12GP0CL81 117 aa10.64□□□□□ -0.71
BRAT1-203ENST00000467558 GAGE12IP0CL82 117 aa10.64□□□□□ -0.71
BRAT1-203ENST00000467558 C21orf62-AS1Q17RA5 79 aa10.64□□□□□ -0.71
BRAT1-203ENST00000467558 DEFB121Q5J5C9 76 aa10.64□□□□□ -0.71
BRAT1-203ENST00000467558 TMEM86BQ8N661 226 aa10.64□□□□□ -0.71
BRAT1-203ENST00000467558 USP9XQ93008 2570 aaPredicted RBP10.64□□□□□ -0.71
BRAT1-203ENST00000467558 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.64□□□□□ -0.71
BRAT1-203ENST00000467558 TRBV6-1A0A0K0K1D8 114 aa10.64□□□□□ -0.71
BRAT1-203ENST00000467558 PRAC2D3DTV9 90 aa10.64□□□□□ -0.71
BRAT1-203ENST00000467558 M0R2P5 195 aa10.64□□□□□ -0.71
BRAT1-203ENST00000467558 C9orf47Q6ZRZ4 202 aa10.64□□□□□ -0.71
BRAT1-203ENST00000467558 APOC4P55056 127 aa10.64□□□□□ -0.71
BRAT1-203ENST00000467558 ZNF493Q6ZR52 646 aa10.64□□□□□ -0.71
BRAT1-203ENST00000467558 USP9YO00507 2555 aaPredicted RBP10.64□□□□□ -0.71
BRAT1-203ENST00000467558 IGLC3P0DOY3 106 aa10.64□□□□□ -0.71
BRAT1-203ENST00000467558 DPH3Q96FX2 82 aa10.64□□□□□ -0.71
BRAT1-203ENST00000467558 C2orf70A6NJV1 201 aa10.63□□□□□ -0.71
BRAT1-203ENST00000467558 LINC00158P58513 81 aa10.63□□□□□ -0.71
BRAT1-203ENST00000467558 SAMD5Q5TGI4 173 aa10.63□□□□□ -0.71
BRAT1-203ENST00000467558 ZNRF2Q8NHG8 242 aa10.63□□□□□ -0.71
BRAT1-203ENST00000467558 IGF1P05019 195 aa10.63□□□□□ -0.71
BRAT1-203ENST00000467558 ESDP10768 282 aa10.63□□□□□ -0.71
BRAT1-203ENST00000467558 CKS1BP61024 79 aa10.63□□□□□ -0.71
BRAT1-203ENST00000467558 CHAC1Q9BUX1 264 aa10.63□□□□□ -0.71
BRAT1-203ENST00000467558 TLN2Q9Y4G6 2542 aa10.63□□□□□ -0.71
BRAT1-203ENST00000467558 K7EMI3 77 aa10.63□□□□□ -0.71
BRAT1-203ENST00000467558 CFHR3Q02985 330 aa10.63□□□□□ -0.71
BRAT1-203ENST00000467558 ERG28Q9UKR5 140 aa10.63□□□□□ -0.71
BRAT1-203ENST00000467558 LINC01548A6NM66 108 aa10.62□□□□□ -0.71
BRAT1-203ENST00000467558 DAD1P61803 113 aa10.62□□□□□ -0.71
BRAT1-203ENST00000467558 MYMXA0A1B0GTQ4 84 aa10.62□□□□□ -0.71
BRAT1-203ENST00000467558 UNQ9165/PRO28630Q6UXU0 137 aa10.62□□□□□ -0.71
BRAT1-203ENST00000467558 GTSF1Q8WW33 167 aa10.62□□□□□ -0.71
BRAT1-203ENST00000467558 NEGR1Q7Z3B1 354 aa10.62□□□□□ -0.71
BRAT1-203ENST00000467558 CCDC140Q96MF4 163 aa10.62□□□□□ -0.71
BRAT1-203ENST00000467558 TRBV25-1A0A075B6N4 114 aa10.61□□□□□ -0.71
BRAT1-203ENST00000467558 F8VRH5 84 aa10.61□□□□□ -0.71
BRAT1-203ENST00000467558 IGLL1P15814 213 aa10.61□□□□□ -0.71
BRAT1-203ENST00000467558 RNF152Q8N8N0 203 aa10.61□□□□□ -0.71
BRAT1-203ENST00000467558 C6orf226Q5I0X4 101 aa10.61□□□□□ -0.71
BRAT1-203ENST00000467558 ZNF747Q9BV97 191 aa10.61□□□□□ -0.71
BRAT1-203ENST00000467558 KIAA1549Q9HCM3 1950 aa10.61□□□□□ -0.71
BRAT1-203ENST00000467558 IGHG4P01861 327 aa10.61□□□□□ -0.71
BRAT1-203ENST00000467558 MRPL35Q9NZE8 188 aaKnown RBP10.61□□□□□ -0.71
BRAT1-203ENST00000467558 DNAH14Q0VDD8 3507 aa10.61□□□□□ -0.71
BRAT1-203ENST00000467558 EXPH5Q8NEV8 1989 aa10.6□□□□□ -0.71
BRAT1-203ENST00000467558 PAX2Q02962 417 aa10.6□□□□□ -0.71
BRAT1-203ENST00000467558 CDSNQ15517 529 aa10.6□□□□□ -0.71
BRAT1-203ENST00000467558 ZNF843Q8N446 348 aa10.6□□□□□ -0.71
BRAT1-203ENST00000467558 TRBV12-3P01733 135 aa10.6□□□□□ -0.71
BRAT1-203ENST00000467558 PRIMA1Q86XR5 153 aa10.6□□□□□ -0.71
BRAT1-203ENST00000467558 MSRB1Q9NZV6 116 aa10.6□□□□□ -0.71
BRAT1-203ENST00000467558 HCFC1P51610 2035 aa10.6□□□□□ -0.71
BRAT1-203ENST00000467558 LAMA1P25391 3075 aa10.6□□□□□ -0.71
BRAT1-203ENST00000467558 CD5LO43866 347 aa10.6□□□□□ -0.71
BRAT1-203ENST00000467558 SS18Q15532 418 aa10.6□□□□□ -0.71
BRAT1-203ENST00000467558 APRG1Q8IVJ8 170 aa10.6□□□□□ -0.71
BRAT1-203ENST00000467558 HLA-DRB4P13762 266 aa10.59□□□□□ -0.71
BRAT1-203ENST00000467558 HLA-DRB4X5D2U9 266 aa10.59□□□□□ -0.71
BRAT1-203ENST00000467558 ZFYVE26Q68DK2 2539 aa10.59□□□□□ -0.71
BRAT1-203ENST00000467558 C19orf71A6NCJ1 209 aa10.59□□□□□ -0.71
BRAT1-203ENST00000467558 F5H768 121 aa10.59□□□□□ -0.71
BRAT1-203ENST00000467558 TMEM243Q9BU79 118 aa10.59□□□□□ -0.71
BRAT1-203ENST00000467558 U3KQE9 123 aa10.58□□□□□ -0.72
BRAT1-203ENST00000467558 IGHV3-38A0A0C4DH36 116 aa10.58□□□□□ -0.72
BRAT1-203ENST00000467558 KIR3DS1Q14943 382 aa10.58□□□□□ -0.72
BRAT1-203ENST00000467558 TRAV25A0A0B4J276 109 aa10.58□□□□□ -0.72
BRAT1-203ENST00000467558 SPRY2O43597 315 aa10.58□□□□□ -0.72
BRAT1-203ENST00000467558 IGHV4-31P0DP07 118 aa10.58□□□□□ -0.72
BRAT1-203ENST00000467558 COX8AP10176 69 aa10.58□□□□□ -0.72
BRAT1-203ENST00000467558 CPAMD8Q8IZJ3 1885 aa10.58□□□□□ -0.72
BRAT1-203ENST00000467558 GATA1P15976 413 aaPredicted RBP10.57□□□□□ -0.72
BRAT1-203ENST00000467558 C2CD3Q4AC94 2353 aa10.57□□□□□ -0.72
BRAT1-203ENST00000467558 ARHGAP32A7KAX9 2087 aa10.57□□□□□ -0.72
BRAT1-203ENST00000467558 CTRLP40313 264 aa10.57□□□□□ -0.72
BRAT1-203ENST00000467558 NAA38Q9BRA0 125 aaKnown RBP10.57□□□□□ -0.72
BRAT1-203ENST00000467558 VCANP13611 3396 aa10.57□□□□□ -0.72
BRAT1-203ENST00000467558 RHOHQ15669 191 aa10.57□□□□□ -0.72
BRAT1-203ENST00000467558 EREGO14944 169 aa10.57□□□□□ -0.72
BRAT1-203ENST00000467558 GHRHP01286 108 aa10.57□□□□□ -0.72
BRAT1-203ENST00000467558 C4orf3Q8WVX3 66 aa10.57□□□□□ -0.72
BRAT1-203ENST00000467558 DLEU1O43261 78 aa10.56□□□□□ -0.72
BRAT1-203ENST00000467558 WDFY4Q6ZS81 3184 aa10.56□□□□□ -0.72
BRAT1-203ENST00000467558 PAX4O43316 350 aa10.56□□□□□ -0.72
BRAT1-203ENST00000467558 C9orf66Q5T8R8 295 aa10.56□□□□□ -0.72
BRAT1-203ENST00000467558 Q6YL49 198 aa10.56□□□□□ -0.72
BRAT1-203ENST00000467558 CFAP54Q96N23 3096 aa10.56□□□□□ -0.72
BRAT1-203ENST00000467558 NUPR1O60356 82 aa10.56□□□□□ -0.72
BRAT1-203ENST00000467558 NOP10Q9NPE3 64 aaKnown RBP10.56□□□□□ -0.72
BRAT1-203ENST00000467558 IGLV2-8P01709 118 aa10.55□□□□□ -0.72
BRAT1-203ENST00000467558 NPC2P61916 151 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 1148 ms