RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 IGKV2D-40P01614 121 aaPredicted RBP10.12□□□□□ -0.79
HMGXB4-206ENST00000466438 PLA2G1BP04054 148 aaKnown RBP10.12□□□□□ -0.79
HMGXB4-206ENST00000466438 ATP5G1P05496 136 aa10.12□□□□□ -0.79
HMGXB4-206ENST00000466438 MGST1P10620 155 aaKnown RBP10.12□□□□□ -0.79
HMGXB4-206ENST00000466438 SAPCD1Q5SSQ6 148 aa10.12□□□□□ -0.79
HMGXB4-206ENST00000466438 TMEM78Q5T7P6 136 aa10.12□□□□□ -0.79
HMGXB4-206ENST00000466438 GDF5OSQ5U4N7 250 aa10.12□□□□□ -0.79
HMGXB4-206ENST00000466438 PRNTQ86SH4 94 aa10.12□□□□□ -0.79
HMGXB4-206ENST00000466438 ISOC2Q96AB3 205 aa10.12□□□□□ -0.79
HMGXB4-206ENST00000466438 ANAPC16Q96DE5 110 aa10.12□□□□□ -0.79
HMGXB4-206ENST00000466438 CLUHP3Q96NS8 147 aa10.12□□□□□ -0.79
HMGXB4-206ENST00000466438 TMEM70Q9BUB7 260 aa10.12□□□□□ -0.79
HMGXB4-206ENST00000466438 CTDSP1Q9GZU7 261 aa10.12□□□□□ -0.79
HMGXB4-206ENST00000466438 PSG8Q9UQ74 426 aa10.12□□□□□ -0.79
HMGXB4-206ENST00000466438 GHRHP01286 108 aa10.11□□□□□ -0.79
HMGXB4-206ENST00000466438 CT45A10P0DMU9 189 aa10.11□□□□□ -0.79
HMGXB4-206ENST00000466438 TMEM183AQ8IXX5 376 aa10.11□□□□□ -0.79
HMGXB4-206ENST00000466438 C15orf54Q8N8G6 183 aa10.11□□□□□ -0.79
HMGXB4-206ENST00000466438 OCC1Q8TAD7 63 aa10.11□□□□□ -0.79
HMGXB4-206ENST00000466438 TRAV8-1A0A0A6YYK1 113 aa10.1□□□□□ -0.79
HMGXB4-206ENST00000466438 PGPEP1LA6NFU8 196 aa10.1□□□□□ -0.79
HMGXB4-206ENST00000466438 GCGP01275 180 aa10.1□□□□□ -0.79
HMGXB4-206ENST00000466438 IGLV2-11P01706 119 aa10.1□□□□□ -0.79
HMGXB4-206ENST00000466438 C9orf47Q6ZRZ4 202 aa10.1□□□□□ -0.79
HMGXB4-206ENST00000466438 SFRP2Q96HF1 295 aa10.1□□□□□ -0.79
HMGXB4-206ENST00000466438 C20orf173Q96LM9 149 aa10.1□□□□□ -0.79
HMGXB4-206ENST00000466438 SGK494Q96LW2 274 aa10.1□□□□□ -0.79
HMGXB4-206ENST00000466438 SAV1Q9H4B6 383 aaPredicted RBP10.1□□□□□ -0.79
HMGXB4-206ENST00000466438 MRPS16Q9Y3D3 137 aaKnown RBP10.1□□□□□ -0.79
HMGXB4-206ENST00000466438 A0A087WTM6 91 aa10.09□□□□□ -0.79
HMGXB4-206ENST00000466438 H7BYZ3 331 aa10.09□□□□□ -0.79
HMGXB4-206ENST00000466438 DNAH10OSP0CZ25 163 aa10.09□□□□□ -0.79
HMGXB4-206ENST00000466438 ZNF138P52744 262 aa10.09□□□□□ -0.79
HMGXB4-206ENST00000466438 EBLN2Q6P2I7 272 aa10.09□□□□□ -0.79
HMGXB4-206ENST00000466438 ATRAIDQ6UW56 229 aa10.09□□□□□ -0.79
HMGXB4-206ENST00000466438 LINC00477Q96M19 166 aa10.09□□□□□ -0.79
HMGXB4-206ENST00000466438 SMCO4Q9NRQ5 59 aa10.09□□□□□ -0.79
HMGXB4-206ENST00000466438 TMEM242Q9NWH2 141 aa10.09□□□□□ -0.79
HMGXB4-206ENST00000466438 PPP1R14DQ9NXH3 145 aa10.09□□□□□ -0.79
HMGXB4-206ENST00000466438 LENEPQ9Y5L5 61 aa10.09□□□□□ -0.79
HMGXB4-206ENST00000466438 CBY3A6NI87 242 aa10.08□□□□□ -0.8
HMGXB4-206ENST00000466438 PRAC2D3DTV9 90 aa10.08□□□□□ -0.8
HMGXB4-206ENST00000466438 NPIPB6E9PJ23 425 aa10.08□□□□□ -0.8
HMGXB4-206ENST00000466438 K7EN84 100 aa10.08□□□□□ -0.8
HMGXB4-206ENST00000466438 IGLV2-8P01709 118 aa10.08□□□□□ -0.8
HMGXB4-206ENST00000466438 DEFB1P60022 68 aa10.08□□□□□ -0.8
HMGXB4-206ENST00000466438 HIST1H1AQ02539 215 aaPredicted RBP10.08□□□□□ -0.8
HMGXB4-206ENST00000466438 ESRGQ1W209 222 aa10.08□□□□□ -0.8
HMGXB4-206ENST00000466438 IBA57Q5T440 356 aaKnown RBP10.08□□□□□ -0.8
HMGXB4-206ENST00000466438 FOXI2Q6ZQN5 318 aa10.08□□□□□ -0.8
HMGXB4-206ENST00000466438 NHLRC2Q8NBF2 726 aa10.08□□□□□ -0.8
HMGXB4-206ENST00000466438 OR4B1Q8NGF8 309 aa10.08□□□□□ -0.8
HMGXB4-206ENST00000466438 OR8A1Q8NGG7 326 aa10.08□□□□□ -0.8
HMGXB4-206ENST00000466438 OR10G8Q8NGN5 311 aa10.08□□□□□ -0.8
HMGXB4-206ENST00000466438 DAZAP1Q96EP5 407 aaKnown RBP10.08□□□□□ -0.8
HMGXB4-206ENST00000466438 VGLL1Q99990 258 aa10.08□□□□□ -0.8
HMGXB4-206ENST00000466438 MLST8Q9BVC4 326 aa10.08□□□□□ -0.8
HMGXB4-206ENST00000466438 ZNF492Q9P255 531 aa10.08□□□□□ -0.8
HMGXB4-206ENST00000466438 TRBV7-9A0A0J9YWB2 115 aa10.07□□□□□ -0.8
HMGXB4-206ENST00000466438 DUSP14O95147 198 aaKnown RBP10.07□□□□□ -0.8
HMGXB4-206ENST00000466438 OXTP01178 125 aa10.07□□□□□ -0.8
HMGXB4-206ENST00000466438 SMUG1Q53HV7 270 aa10.07□□□□□ -0.8
HMGXB4-206ENST00000466438 LCE2AQ5TA79 106 aaPredicted RBP10.07□□□□□ -0.8
HMGXB4-206ENST00000466438 PRR27Q6MZM9 219 aa10.07□□□□□ -0.8
HMGXB4-206ENST00000466438 FAM231DQ6ZW35 169 aa10.07□□□□□ -0.8
HMGXB4-206ENST00000466438 TMEM208Q9BTX3 173 aa10.07□□□□□ -0.8
HMGXB4-206ENST00000466438 OSTCQ9NRP0 149 aa10.07□□□□□ -0.8
HMGXB4-206ENST00000466438 SCO1O75880 301 aa10.06□□□□□ -0.8
HMGXB4-206ENST00000466438 S100PP25815 95 aa10.06□□□□□ -0.8
HMGXB4-206ENST00000466438 ERCC8Q13216 396 aa10.06□□□□□ -0.8
HMGXB4-206ENST00000466438 OR5I1Q13606 314 aa10.06□□□□□ -0.8
HMGXB4-206ENST00000466438 COX8CQ7Z4L0 72 aa10.06□□□□□ -0.8
HMGXB4-206ENST00000466438 Q8TAT8 98 aa10.06□□□□□ -0.8
HMGXB4-206ENST00000466438 AGPAT4-IT1Q9H0P7 198 aa10.06□□□□□ -0.8
HMGXB4-206ENST00000466438 FAT3Q8TDW7 4589 aa10.06□□□□□ -0.8
HMGXB4-206ENST00000466438 P01737 135 aa10.05□□□□□ -0.8
HMGXB4-206ENST00000466438 TSPOP30536 169 aa10.05□□□□□ -0.8
HMGXB4-206ENST00000466438 BTN1A1Q13410 526 aa10.05□□□□□ -0.8
HMGXB4-206ENST00000466438 KCNIP4Q6PIL6 250 aa10.05□□□□□ -0.8
HMGXB4-206ENST00000466438 ODF3Q96PU9 254 aa10.05□□□□□ -0.8
HMGXB4-206ENST00000466438 A0A0J9YX75 114 aa10.04□□□□□ -0.8
HMGXB4-206ENST00000466438 ZNF705GA8MUZ8 300 aaPredicted RBP10.04□□□□□ -0.8
HMGXB4-206ENST00000466438 GATCO43716 136 aaKnown RBP10.04□□□□□ -0.8
HMGXB4-206ENST00000466438 LEPP41159 167 aa10.04□□□□□ -0.8
HMGXB4-206ENST00000466438 FAM162BQ5T6X4 162 aa10.04□□□□□ -0.8
HMGXB4-206ENST00000466438 NFE4Q86UQ8 179 aa10.04□□□□□ -0.8
HMGXB4-206ENST00000466438 CBLN2Q8IUK8 224 aa10.04□□□□□ -0.8
HMGXB4-206ENST00000466438 ZC2HC1AQ96GY0 325 aa10.04□□□□□ -0.8
HMGXB4-206ENST00000466438 BTF3L4Q96K17 158 aa10.04□□□□□ -0.8
HMGXB4-206ENST00000466438 IMMP2LQ96T52 175 aa10.04□□□□□ -0.8
HMGXB4-206ENST00000466438 RNASE7Q9H1E1 156 aaKnown RBP10.04□□□□□ -0.8
HMGXB4-206ENST00000466438 TRAV26-1A0A087WT03 109 aa10.03□□□□□ -0.8
HMGXB4-206ENST00000466438 PLAC8L1A1L4L8 177 aa10.03□□□□□ -0.8
HMGXB4-206ENST00000466438 F6UB75 175 aa10.03□□□□□ -0.8
HMGXB4-206ENST00000466438 PRM2P04554 102 aa10.03□□□□□ -0.8
HMGXB4-206ENST00000466438 PRB4P10163 310 aaPredicted RBP10.03□□□□□ -0.8
HMGXB4-206ENST00000466438 CT83Q5H943 113 aa10.03□□□□□ -0.8
HMGXB4-206ENST00000466438 C8orf49Q96NF6 230 aa10.03□□□□□ -0.8
HMGXB4-206ENST00000466438 RPP21Q9H633 154 aaKnown RBP10.03□□□□□ -0.8
HMGXB4-206ENST00000466438 XKRY2A2RUG3 117 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms