RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 ANKRD30AQ9BXX3 1397 aa0.26□□□□□ -2.37
SSB-207ENST00000465871 ARHGAP31Q2M1Z3 1444 aa0.26□□□□□ -2.37
SSB-207ENST00000465871 CDK12Q9NYV4 1490 aaPredicted RBP0.26□□□□□ -2.37
SSB-207ENST00000465871 BDP1A6H8Y1 2624 aa0.25□□□□□ -2.37
SSB-207ENST00000465871 ABCA4P78363 2273 aa0.25□□□□□ -2.37
SSB-207ENST00000465871 ESPL1Q14674 2120 aa0.25□□□□□ -2.37
SSB-207ENST00000465871 PTPRGP23470 1445 aa0.25□□□□□ -2.37
SSB-207ENST00000465871 TEX49A0A1B0GTD5 131 aa0.25□□□□□ -2.37
SSB-207ENST00000465871 CXorf51AA0A1B0GTR3 108 aa0.25□□□□□ -2.37
SSB-207ENST00000465871 J3QLW9 94 aa0.25□□□□□ -2.37
SSB-207ENST00000465871 YPEL1O60688 119 aa0.25□□□□□ -2.37
SSB-207ENST00000465871 KRTAP2-3P0C7H8 128 aa0.25□□□□□ -2.37
SSB-207ENST00000465871 SLC25A6P12236 298 aa0.25□□□□□ -2.37
SSB-207ENST00000465871 ATP6V0E2Q8NHE4 81 aa0.25□□□□□ -2.37
SSB-207ENST00000465871 LZICQ8WZA0 190 aa0.25□□□□□ -2.37
SSB-207ENST00000465871 KRTAP2-4Q9BYR9 128 aa0.25□□□□□ -2.37
SSB-207ENST00000465871 KRTAP2-1Q9BYU5 128 aa0.25□□□□□ -2.37
SSB-207ENST00000465871 BET1LQ9NYM9 111 aa0.25□□□□□ -2.37
SSB-207ENST00000465871 TNCP24821 2201 aa0.25□□□□□ -2.37
SSB-207ENST00000465871 AFDNP55196 1824 aaKnown RBP0.24□□□□□ -2.37
SSB-207ENST00000465871 LRP5O75197 1615 aa0.24□□□□□ -2.37
SSB-207ENST00000465871 PTPRZ1P23471 2315 aaPredicted RBP0.24□□□□□ -2.37
SSB-207ENST00000465871 CCDC171Q6TFL3 1326 aa0.24□□□□□ -2.37
SSB-207ENST00000465871 F2Z2F3 143 aa0.24□□□□□ -2.37
SSB-207ENST00000465871 M0R129 80 aa0.24□□□□□ -2.37
SSB-207ENST00000465871 PYYP10082 97 aa0.24□□□□□ -2.37
SSB-207ENST00000465871 SCGB1A1P11684 91 aa0.24□□□□□ -2.37
SSB-207ENST00000465871 CKS1BP61024 79 aa0.24□□□□□ -2.37
SSB-207ENST00000465871 HIST1H1AQ02539 215 aaPredicted RBP0.24□□□□□ -2.37
SSB-207ENST00000465871 ATP11AUNQ6ZP68 121 aa0.24□□□□□ -2.37
SSB-207ENST00000465871 CYP2G1PQ6ZSU1 146 aa0.24□□□□□ -2.37
SSB-207ENST00000465871 MMGT1Q8N4V1 131 aa0.24□□□□□ -2.37
SSB-207ENST00000465871 LSM2Q9Y333 95 aaKnown RBP0.24□□□□□ -2.37
SSB-207ENST00000465871 XIRP1Q702N8 1843 aaKnown RBP0.24□□□□□ -2.37
SSB-207ENST00000465871 KIDINS220Q9ULH0 1771 aa0.24□□□□□ -2.37
SSB-207ENST00000465871 KDM5CP41229 1560 aa0.23□□□□□ -2.37
SSB-207ENST00000465871 KCPQ6ZWJ8 1503 aa0.23□□□□□ -2.37
SSB-207ENST00000465871 TRAV12-2A0A075B6T6 113 aa0.23□□□□□ -2.37
SSB-207ENST00000465871 TRAV2A0A0B4J234 112 aa0.23□□□□□ -2.37
SSB-207ENST00000465871 J3QR89 54 aa0.23□□□□□ -2.37
SSB-207ENST00000465871 ELOF1P60002 83 aaKnown RBP0.23□□□□□ -2.37
SSB-207ENST00000465871 IFI27L1Q96BM0 104 aa0.23□□□□□ -2.37
SSB-207ENST00000465871 SMIM3Q9BZL3 60 aa0.23□□□□□ -2.37
SSB-207ENST00000465871 GSKIPQ9P0R6 139 aa0.23□□□□□ -2.37
SSB-207ENST00000465871 RREB1Q92766 1687 aa0.23□□□□□ -2.37
SSB-207ENST00000465871 BLMP54132 1417 aaPredicted RBP0.22□□□□□ -2.37
SSB-207ENST00000465871 RBBP6Q7Z6E9 1792 aaKnown RBP0.22□□□□□ -2.37
SSB-207ENST00000465871 A0A096LNT2 108 aa0.22□□□□□ -2.37
SSB-207ENST00000465871 RBAKDNA6NC62 111 aa0.22□□□□□ -2.37
SSB-207ENST00000465871 M0R2P5 195 aa0.22□□□□□ -2.37
SSB-207ENST00000465871 MORN2Q502X0 79 aa0.22□□□□□ -2.37
SSB-207ENST00000465871 OR2T2Q6IF00 324 aa0.22□□□□□ -2.37
SSB-207ENST00000465871 VMO1Q7Z5L0 202 aa0.22□□□□□ -2.37
SSB-207ENST00000465871 ERG28Q9UKR5 140 aa0.22□□□□□ -2.37
SSB-207ENST00000465871 SYNJ1O43426 1573 aa0.22□□□□□ -2.37
SSB-207ENST00000465871 MYO7AQ13402 2215 aa0.22□□□□□ -2.37
SSB-207ENST00000465871 DLEC1Q9Y238 1755 aa0.22□□□□□ -2.37
SSB-207ENST00000465871 IGSF10Q6WRI0 2623 aa0.21□□□□□ -2.38
SSB-207ENST00000465871 ARHGEF10O15013 1369 aa0.21□□□□□ -2.38
SSB-207ENST00000465871 KMT2DO14686 5537 aa0.21□□□□□ -2.38
SSB-207ENST00000465871 MUC5ACP98088 5654 aa0.21□□□□□ -2.38
SSB-207ENST00000465871 SYNE1Q8NF91 8797 aaKnown RBP0.21□□□□□ -2.38
SSB-207ENST00000465871 FAM236AA0A1B0GUQ0 79 aa0.21□□□□□ -2.38
SSB-207ENST00000465871 FAM236BA0A1B0GV22 79 aa0.21□□□□□ -2.38
SSB-207ENST00000465871 MCRIP1C9JLW8 97 aa0.21□□□□□ -2.38
SSB-207ENST00000465871 CCDC179H3BU77 68 aa0.21□□□□□ -2.38
SSB-207ENST00000465871 M0R2Z0 102 aa0.21□□□□□ -2.38
SSB-207ENST00000465871 ARPC5O15511 151 aa0.21□□□□□ -2.38
SSB-207ENST00000465871 IGLC6P0CF74 106 aa0.21□□□□□ -2.38
SSB-207ENST00000465871 COX4I1P13073 169 aa0.21□□□□□ -2.38
SSB-207ENST00000465871 MIC13Q5XKP0 118 aa0.21□□□□□ -2.38
SSB-207ENST00000465871 PRR15LQ9BU68 103 aa0.21□□□□□ -2.38
SSB-207ENST00000465871 PROK2Q9HC23 129 aa0.21□□□□□ -2.38
SSB-207ENST00000465871 TPRP12270 2363 aaKnown RBP0.21□□□□□ -2.38
SSB-207ENST00000465871 ARAP1Q96P48 1450 aa0.21□□□□□ -2.38
SSB-207ENST00000465871 JMJD1CQ15652 2540 aa0.21□□□□□ -2.38
SSB-207ENST00000465871 MED13LQ71F56 2210 aa0.21□□□□□ -2.38
SSB-207ENST00000465871 IGF2RP11717 2491 aa0.21□□□□□ -2.38
SSB-207ENST00000465871 TRBV20-1A0A075B6N2 111 aa0.2□□□□□ -2.38
SSB-207ENST00000465871 K7ERU9 68 aa0.2□□□□□ -2.38
SSB-207ENST00000465871 NPC2P61916 151 aa0.2□□□□□ -2.38
SSB-207ENST00000465871 EMX2Q04743 252 aa0.2□□□□□ -2.38
SSB-207ENST00000465871 SPCS2Q15005 226 aa0.2□□□□□ -2.38
SSB-207ENST00000465871 LINC01545Q5VT33 79 aa0.2□□□□□ -2.38
SSB-207ENST00000465871 RPL7L1Q6DKI1 246 aaKnown RBP0.2□□□□□ -2.38
SSB-207ENST00000465871 NDUFA11Q86Y39 141 aa0.2□□□□□ -2.38
SSB-207ENST00000465871 CTAGE3PQ8IX95 158 aa0.2□□□□□ -2.38
SSB-207ENST00000465871 C4orf33Q8N1A6 199 aa0.2□□□□□ -2.38
SSB-207ENST00000465871 C20orf197Q8N268 126 aa0.2□□□□□ -2.38
SSB-207ENST00000465871 TSTD1Q8NFU3 115 aa0.2□□□□□ -2.38
SSB-207ENST00000465871 PSMG3Q9BT73 122 aaPredicted RBP0.2□□□□□ -2.38
SSB-207ENST00000465871 BPESC1Q9GZL8 116 aa0.2□□□□□ -2.38
SSB-207ENST00000465871 SAR1AQ9NR31 198 aa0.2□□□□□ -2.38
SSB-207ENST00000465871 NDUFA12Q9UI09 145 aa0.2□□□□□ -2.38
SSB-207ENST00000465871 UHRF1BP1LA0JNW5 1464 aa0.2□□□□□ -2.38
SSB-207ENST00000465871 ERCC6Q03468 1493 aa0.2□□□□□ -2.38
SSB-207ENST00000465871 WDR97A6NE52 1622 aa0.2□□□□□ -2.38
SSB-207ENST00000465871 ANK2Q01484 3957 aa0.19□□□□□ -2.38
SSB-207ENST00000465871 TRAV12-3A0A0B4J271 114 aa0.19□□□□□ -2.38
SSB-207ENST00000465871 A6NIN4 97 aa0.19□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 164.1 ms