RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 SUMO4Q6EEV6 95 aa12.29□□□□□ -0.44
SMC4-204ENST00000462787 DEFB131AP59861 70 aa12.29□□□□□ -0.44
SMC4-204ENST00000462787 SPATA25Q9BR10 227 aa12.29□□□□□ -0.44
SMC4-204ENST00000462787 IGHV7-4-1A0A0J9YVY3 117 aa12.28□□□□□ -0.44
SMC4-204ENST00000462787 MED14OSP0DP75 135 aa12.28□□□□□ -0.44
SMC4-204ENST00000462787 KIF26AQ9ULI4 1882 aaPredicted RBP12.28□□□□□ -0.44
SMC4-204ENST00000462787 CTSGP08311 255 aa12.28□□□□□ -0.44
SMC4-204ENST00000462787 A0A0J9YXV3 536 aa12.27□□□□□ -0.44
SMC4-204ENST00000462787 HERV-K104P63124 156 aa12.27□□□□□ -0.44
SMC4-204ENST00000462787 MRPL23Q16540 153 aaKnown RBP12.27□□□□□ -0.44
SMC4-204ENST00000462787 BUB3O43684 328 aa12.27□□□□□ -0.45
SMC4-204ENST00000462787 PF4P02776 101 aa12.27□□□□□ -0.45
SMC4-204ENST00000462787 KIAA1549LQ6ZVL6 1849 aa12.27□□□□□ -0.45
SMC4-204ENST00000462787 TRAV12-2A0A075B6T6 113 aa12.27□□□□□ -0.45
SMC4-204ENST00000462787 C9orf47Q6ZRZ4 202 aa12.27□□□□□ -0.45
SMC4-204ENST00000462787 Q9H8V8 135 aa12.27□□□□□ -0.45
SMC4-204ENST00000462787 IGFL3Q6UXB1 125 aa12.26□□□□□ -0.45
SMC4-204ENST00000462787 HAMPP81172 84 aa12.26□□□□□ -0.45
SMC4-204ENST00000462787 FAM215AQ9Y5M1 114 aa12.26□□□□□ -0.45
SMC4-204ENST00000462787 PFN2P35080 140 aa12.26□□□□□ -0.45
SMC4-204ENST00000462787 PRSS33Q8NF86 280 aa12.26□□□□□ -0.45
SMC4-204ENST00000462787 TMEM243Q9BU79 118 aa12.26□□□□□ -0.45
SMC4-204ENST00000462787 ZNRF2Q8NHG8 242 aa12.25□□□□□ -0.45
SMC4-204ENST00000462787 U3KQK5 164 aa12.25□□□□□ -0.45
SMC4-204ENST00000462787 H3BUA1 57 aa12.25□□□□□ -0.45
SMC4-204ENST00000462787 CGB3P0DN86 165 aa12.25□□□□□ -0.45
SMC4-204ENST00000462787 CGB7P0DN87 165 aa12.25□□□□□ -0.45
SMC4-204ENST00000462787 IGHV3-38A0A0C4DH36 116 aa12.25□□□□□ -0.45
SMC4-204ENST00000462787 IGLC6P0CF74 106 aa12.25□□□□□ -0.45
SMC4-204ENST00000462787 A0A1B0GX51 115 aa12.24□□□□□ -0.45
SMC4-204ENST00000462787 PRAC2D3DTV9 90 aa12.24□□□□□ -0.45
SMC4-204ENST00000462787 RNASE13Q5GAN3 156 aaKnown RBP12.24□□□□□ -0.45
SMC4-204ENST00000462787 Q8N1Y9 231 aa12.24□□□□□ -0.45
SMC4-204ENST00000462787 CADP27708 2225 aa12.24□□□□□ -0.45
SMC4-204ENST00000462787 TINCRA0A1B0GVN0 87 aa12.24□□□□□ -0.45
SMC4-204ENST00000462787 IGHV3-16A0A0C4DH30 117 aa12.24□□□□□ -0.45
SMC4-204ENST00000462787 MYCNOSP40205 109 aa12.24□□□□□ -0.45
SMC4-204ENST00000462787 POLEQ07864 2286 aa12.24□□□□□ -0.45
SMC4-204ENST00000462787 A0A1W2PRX2 142 aa12.23□□□□□ -0.45
SMC4-204ENST00000462787 H0YGX0 51 aa12.23□□□□□ -0.45
SMC4-204ENST00000462787 LINC00643Q86TS7 51 aa12.23□□□□□ -0.45
SMC4-204ENST00000462787 LINC00574Q9H8X3 128 aa12.23□□□□□ -0.45
SMC4-204ENST00000462787 SPRY2O43597 315 aa12.23□□□□□ -0.45
SMC4-204ENST00000462787 TMEM258P61165 79 aa12.23□□□□□ -0.45
SMC4-204ENST00000462787 BPESC1Q9GZL8 116 aa12.23□□□□□ -0.45
SMC4-204ENST00000462787 ORMDL1Q9P0S3 153 aa12.23□□□□□ -0.45
SMC4-204ENST00000462787 F6UB75 175 aa12.23□□□□□ -0.45
SMC4-204ENST00000462787 LGALS9O00182 355 aa12.23□□□□□ -0.45
SMC4-204ENST00000462787 DSCR9P59020 149 aa12.23□□□□□ -0.45
SMC4-204ENST00000462787 UBE2E2Q96LR5 201 aa12.23□□□□□ -0.45
SMC4-204ENST00000462787 B4DSR2 109 aa12.22□□□□□ -0.45
SMC4-204ENST00000462787 IGKV2D-26A0A0A0MRZ7 120 aa12.22□□□□□ -0.45
SMC4-204ENST00000462787 CRLF1O75462 422 aa12.22□□□□□ -0.45
SMC4-204ENST00000462787 IGHV1-69P01742 117 aa12.22□□□□□ -0.45
SMC4-204ENST00000462787 TRIOBPQ9H2D6 2365 aa12.22□□□□□ -0.45
SMC4-204ENST00000462787 RPL39P62891 51 aaKnown RBP12.22□□□□□ -0.45
SMC4-204ENST00000462787 UFSP1Q6NVU6 142 aa12.22□□□□□ -0.45
SMC4-204ENST00000462787 RS1O15537 224 aa12.22□□□□□ -0.45
SMC4-204ENST00000462787 C16orf54Q6UWD8 224 aa12.21□□□□□ -0.45
SMC4-204ENST00000462787 MALRD1Q5VYJ5 2156 aa12.21□□□□□ -0.46
SMC4-204ENST00000462787 SLC25A29Q8N8R3 303 aa12.21□□□□□ -0.46
SMC4-204ENST00000462787 IGHV7-81A0A0B4J1V7 117 aa12.2□□□□□ -0.46
SMC4-204ENST00000462787 HTN3P15516 51 aa12.2□□□□□ -0.46
SMC4-204ENST00000462787 RBM3P98179 157 aaKnown RBP12.2□□□□□ -0.46
SMC4-204ENST00000462787 DSCR8Q96T75 97 aa12.2□□□□□ -0.46
SMC4-204ENST00000462787 RUSC1-AS1Q66K80 236 aa12.2□□□□□ -0.46
SMC4-204ENST00000462787 CNOT1A5YKK6 2376 aaKnown RBP12.2□□□□□ -0.46
SMC4-204ENST00000462787 IGLV1-47P01700 117 aa12.2□□□□□ -0.46
SMC4-204ENST00000462787 Q8N7P7 452 aa12.2□□□□□ -0.46
SMC4-204ENST00000462787 WT1P19544 449 aaPredicted RBP12.19□□□□□ -0.46
SMC4-204ENST00000462787 MAPKAPK5-AS1Q8N8E1 139 aa12.19□□□□□ -0.46
SMC4-204ENST00000462787 ZNF80P51504 273 aaPredicted RBP12.19□□□□□ -0.46
SMC4-204ENST00000462787 NEXN-AS1Q8NBZ9 246 aa12.19□□□□□ -0.46
SMC4-204ENST00000462787 CLEC2BQ92478 149 aa12.18□□□□□ -0.46
SMC4-204ENST00000462787 ADAMTS9Q9P2N4 1935 aa12.18□□□□□ -0.46
SMC4-204ENST00000462787 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.18□□□□□ -0.46
SMC4-204ENST00000462787 IGKV2-29A2NJV5 120 aaPredicted RBP12.18□□□□□ -0.46
SMC4-204ENST00000462787 C3orf56Q8N813 242 aa12.18□□□□□ -0.46
SMC4-204ENST00000462787 UQCRQO14949 82 aa12.17□□□□□ -0.46
SMC4-204ENST00000462787 LINC01619G3V211 115 aa12.17□□□□□ -0.46
SMC4-204ENST00000462787 XCL2Q9UBD3 114 aa12.17□□□□□ -0.46
SMC4-204ENST00000462787 IGKV3D-7A0A0C4DH55 119 aa12.17□□□□□ -0.46
SMC4-204ENST00000462787 CFAP126Q5VTH2 177 aa12.16□□□□□ -0.46
SMC4-204ENST00000462787 HOXB4P17483 251 aaPredicted RBP12.16□□□□□ -0.46
SMC4-204ENST00000462787 IGHV1-58A0A0C4DH39 117 aa12.16□□□□□ -0.46
SMC4-204ENST00000462787 CACNA1HO95180 2353 aa12.15□□□□□ -0.46
SMC4-204ENST00000462787 P0DMU3 169 aa12.15□□□□□ -0.46
SMC4-204ENST00000462787 FAM231AP0DMU4 169 aa12.15□□□□□ -0.46
SMC4-204ENST00000462787 FAM231CP0DMU5 169 aa12.15□□□□□ -0.46
SMC4-204ENST00000462787 C1orf229Q6ZS94 237 aaPredicted RBP12.15□□□□□ -0.46
SMC4-204ENST00000462787 MRAPQ8TCY5 172 aa12.15□□□□□ -0.46
SMC4-204ENST00000462787 MED13Q9UHV7 2174 aa12.15□□□□□ -0.46
SMC4-204ENST00000462787 TMEM131Q92545 1883 aa12.15□□□□□ -0.46
SMC4-204ENST00000462787 SP5Q6BEB4 398 aaPredicted RBP12.15□□□□□ -0.47
SMC4-204ENST00000462787 CLUHP3Q96NS8 147 aa12.15□□□□□ -0.47
SMC4-204ENST00000462787 PCNX3Q9H6A9 2034 aa12.14□□□□□ -0.47
SMC4-204ENST00000462787 A0A0J9YY99 117 aa12.14□□□□□ -0.47
SMC4-204ENST00000462787 NXPH4O95158 308 aa12.14□□□□□ -0.47
SMC4-204ENST00000462787 DKK4Q9UBT3 224 aa12.14□□□□□ -0.47
SMC4-204ENST00000462787 CRIP1P50238 77 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 465.8 ms